FFCP PHASE1:Mm9::chr4:102243124..102243149,+: Difference between revisions
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{{FFCP | {{FFCP|EntrezGene=18578|HGNC=|MCL_coexpression_id=640|UniProt=B1AWD0,E9PVP8|association_with_transcript=424bp_to_ENSMUST00000097950,ENSMUST00000171667_5end|description=CAGE_peak_3_at_Pde4b_5end|id=chr4:102243124..102243149,+|ontology_enrichment_celltype=CL:0000988!3.02e-08!32;CL:0002032!3.02e-08!32;CL:0000037!3.02e-08!32;CL:0000566!3.02e-08!32;CL:0000837!3.02e-08!32;CL:0000838!5.43e-08!12;CL:0000542!1.84e-07!13;CL:0000051!1.84e-07!13;CL:0000084!2.69e-07!11;CL:0000827!2.69e-07!11|ontology_enrichment_celltype_v019_2=CL:0000988,1.62e-09,32;CL:0002032,1.62e-09,32;CL:0000037,1.62e-09,32;CL:0000837,1.62e-09,32;CL:0000838,2.63e-08,12;CL:0000542,9.43e-08,13;CL:0000051,9.43e-08,13;CL:0000084,1.40e-07,11;CL:0000827,1.40e-07,11;CL:0002320,4.79e-07,46;CL:0000134,4.79e-07,46;CL:0000791,6.63e-07,9;CL:0000789,6.63e-07,9;CL:0002420,6.63e-07,9;CL:0002419,6.63e-07,9;CL:0000790,6.63e-07,9|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0002405!5.08e-18!70;UBERON:0002193!3.86e-15!48;UBERON:0002390!8.64e-14!45;UBERON:0003061!8.64e-14!45;UBERON:0005057!1.28e-13!51;UBERON:0001004!5.90e-12!42;UBERON:0000065!1.27e-11!41;UBERON:0000926!1.63e-11!193;UBERON:0004120!1.63e-11!193;UBERON:0006603!1.63e-11!193;UBERON:0004177!2.13e-11!29;UBERON:0001041!4.26e-11!92;UBERON:0000077!4.63e-11!97;UBERON:0003081!3.16e-10!88;UBERON:0005911!8.25e-10!69;UBERON:0003408!9.14e-10!24;UBERON:0006562!9.69e-10!24;UBERON:0001557!9.69e-10!24;UBERON:0001042!9.69e-10!24;UBERON:0008814!9.69e-10!24;UBERON:0009145!9.69e-10!24;UBERON:0000072!1.60e-09!27;UBERON:0002370!1.88e-09!23;UBERON:0000974!1.88e-09!23;UBERON:0004807!1.88e-09!23;UBERON:0005058!1.88e-09!23;UBERON:0003351!1.88e-09!23;UBERON:0009113!1.88e-09!23;UBERON:0003295!1.88e-09!23;UBERON:0009722!1.88e-09!23;UBERON:0005562!1.88e-09!23;UBERON:0007690!1.88e-09!23;UBERON:0003104!4.24e-09!131;UBERON:0009142!4.24e-09!131;UBERON:0001007!9.20e-09!128;UBERON:0001555!9.20e-09!128;UBERON:0007026!9.20e-09!128;UBERON:0001048!1.51e-08!147;UBERON:0004119!2.46e-08!130;UBERON:0000925!2.46e-08!130;UBERON:0006595!2.46e-08!130;UBERON:0004921!3.25e-08!126;UBERON:0004185!3.25e-08!126;UBERON:0003929!2.22e-07!55;UBERON:0002530!9.23e-07!65|ontology_enrichment_uberon_v019_2=UBERON:0002193,2.15e-16,48;UBERON:0002405,2.15e-16,48;UBERON:0002390,5.78e-15,45;UBERON:0003061,5.78e-15,45;UBERON:0001041,1.33e-12,80;UBERON:0001004,2.21e-12,42;UBERON:0004177,3.82e-12,29;UBERON:0005057,3.82e-12,29;UBERON:0000065,4.91e-12,41;UBERON:0000077,2.58e-11,35;UBERON:0003408,1.97e-10,24;UBERON:0006562,2.10e-10,24;UBERON:0001557,2.10e-10,24;UBERON:0001042,2.10e-10,24;UBERON:0008814,2.10e-10,24;UBERON:0009145,2.10e-10,24;UBERON:0000072,3.69e-10,27;UBERON:0002370,4.20e-10,23;UBERON:0000974,4.20e-10,23;UBERON:0004807,4.20e-10,23;UBERON:0005058,4.20e-10,23;UBERON:0003351,4.20e-10,23;UBERON:0009113,4.20e-10,23;UBERON:0003295,4.20e-10,23;UBERON:0009722,4.20e-10,23;UBERON:0005562,4.20e-10,23;UBERON:0007690,4.20e-10,23;UBERON:0005911,6.66e-10,69;UBERON:0003081,1.20e-09,87;UBERON:0001007,1.80e-09,116;UBERON:0001555,1.80e-09,116;UBERON:0007026,1.80e-09,116;UBERON:0004921,6.99e-09,114;UBERON:0004119,9.29e-09,118;UBERON:0000925,9.29e-09,118;UBERON:0006595,9.29e-09,118;UBERON:0003929,1.39e-07,55;UBERON:0001048,2.39e-07,134;UBERON:0002384,4.79e-07,46|phase1_expression=1.28119077683835,0.348975407639361,0,0,0.500895729946347,0.503637815735669,0.467225281191051,26.3411579820816,63.35492496825,59.9205187384303,7.19115466547121,9.57265907944037,40.0609708039021,35.7549445893699,9.66018309265422,10.5287139042709,0.699561878128147,60.8841979141399,69.5170178381096,58.9901615999262,2.12608225377674,4.66667470644161,6.79119451761232,4.47978783821539,4.35877634027623,0,0,0,0.380046838912748,2.77233142735924,1.77384408524244,0,0,0,0.866554859253824,1.32987716286794,1.42918549383658,20.5080499061085,19.533383613095,15.1821885752402,26.4704169613956,30.7370468231301,20.8769451803396,0.251793635951155,0.709638518536602,1.28482726513177,0,0.65407546914134,0.219686182734472,0.194429899074283,0.839918529752175,0,93.9582593923324,41.3456420946466,45.3726628842326,0.771778308107841,1.71920063963254,0.515672092277442,0.202316460859598,0,0,0.338844532069132,0,1.3498495759221,1.97773272513395,2.1314403448383,0,0,0.725827286159344,0.810035629990144,0.210324961351382,0,0.441737081903227,0.367472397644862,0.191690942036473,0,0,0.255374676170375,0.46081959976873,0.395658863190582,0.274462930807229,0,0.558365998002762,1.12552522006336,0.61119299110724,0,0.569486723196412,0,1.06016670666458,1.28471652181535,16.232411367294,4.30211938490693,3.39985666853875,4.31762553310254,1.29955283489534,0.896053774194671,3.7919993435573,0,0,0,0.985903938436763,2.56652954828636,2.54805239706646,0,3.24736561516821,1.01343946190039,2.52762222507392,1.94112595522402,51.26970096214,1.1875371125186,0.520455980298408,1.21786191324856,0,0.60289056221049,0.940709657085638,0.502666365318702,1.23597483867187,2.60278842455841,1.76922110389975,3.07357014900077,4.858513406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| ||
|EntrezGene=18578 | |||
|HGNC= | |||
|MCL_coexpression_id=640 | |||
|UniProt=B1AWD0,E9PVP8 | |||
|association_with_transcript=424bp_to_ENSMUST00000097950,ENSMUST00000171667_5end | |||
|description=CAGE_peak_3_at_Pde4b_5end | |||
|id=chr4:102243124..102243149,+ | |||
|ontology_enrichment_celltype=CL:0000988!3.02e-08!32;CL:0002032!3.02e-08!32;CL:0000037!3.02e-08!32;CL:0000566!3.02e-08!32;CL:0000837!3.02e-08!32;CL:0000838!5.43e-08!12;CL:0000542!1.84e-07!13;CL:0000051!1.84e-07!13;CL:0000084!2.69e-07!11;CL:0000827!2.69e-07!11 | |||
|ontology_enrichment_celltype_v019_2=CL:0000988,1.62e-09,32;CL:0002032,1.62e-09,32;CL:0000037,1.62e-09,32;CL:0000837,1.62e-09,32;CL:0000838,2.63e-08,12;CL:0000542,9.43e-08,13;CL:0000051,9.43e-08,13;CL:0000084,1.40e-07,11;CL:0000827,1.40e-07,11;CL:0002320,4.79e-07,46;CL:0000134,4.79e-07,46;CL:0000791,6.63e-07,9;CL:0000789,6.63e-07,9;CL:0002420,6.63e-07,9;CL:0002419,6.63e-07,9;CL:0000790,6.63e-07,9 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
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|ontology_enrichment_uberon_v019_2=UBERON:0002193,2.15e-16,48;UBERON:0002405,2.15e-16,48;UBERON:0002390,5.78e-15,45;UBERON:0003061,5.78e-15,45;UBERON:0001041,1.33e-12,80;UBERON:0001004,2.21e-12,42;UBERON:0004177,3.82e-12,29;UBERON:0005057,3.82e-12,29;UBERON:0000065,4.91e-12,41;UBERON:0000077,2.58e-11,35;UBERON:0003408,1.97e-10,24;UBERON:0006562,2.10e-10,24;UBERON:0001557,2.10e-10,24;UBERON:0001042,2.10e-10,24;UBERON:0008814,2.10e-10,24;UBERON:0009145,2.10e-10,24;UBERON:0000072,3.69e-10,27;UBERON:0002370,4.20e-10,23;UBERON:0000974,4.20e-10,23;UBERON:0004807,4.20e-10,23;UBERON:0005058,4.20e-10,23;UBERON:0003351,4.20e-10,23;UBERON:0009113,4.20e-10,23;UBERON:0003295,4.20e-10,23;UBERON:0009722,4.20e-10,23;UBERON:0005562,4.20e-10,23;UBERON:0007690,4.20e-10,23;UBERON:0005911,6.66e-10,69;UBERON:0003081,1.20e-09,87;UBERON:0001007,1.80e-09,116;UBERON:0001555,1.80e-09,116;UBERON:0007026,1.80e-09,116;UBERON:0004921,6.99e-09,114;UBERON:0004119,9.29e-09,118;UBERON:0000925,9.29e-09,118;UBERON:0006595,9.29e-09,118;UBERON:0003929,1.39e-07,55;UBERON:0001048,2.39e-07,134;UBERON:0002384,4.79e-07,46 | |||
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| |||
|short_description=p3@Pde4b | |||
}} |
Revision as of 03:16, 14 September 2013
Short description: | p3@Pde4b |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_3_at_Pde4b_5end |
Coexpression cluster: | MCL_coexpression_mm9:640 |
Association with transcript: | 424bp_to_ENSMUST00000097950, ENSMUST00000171667_5end |
EntrezGene: | Pde4b |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hematopoietic cell | 1.62e-09 | 32 |
hematopoietic oligopotent progenitor cell | 1.62e-09 | 32 |
hematopoietic stem cell | 1.62e-09 | 32 |
hematopoietic multipotent progenitor cell | 1.62e-09 | 32 |
lymphoid lineage restricted progenitor cell | 2.63e-08 | 12 |
lymphocyte | 9.43e-08 | 13 |
common lymphoid progenitor | 9.43e-08 | 13 |
T cell | 1.40e-07 | 11 |
pro-T cell | 1.40e-07 | 11 |
connective tissue cell | 4.79e-07 | 46 |
mesenchymal cell | 4.79e-07 | 46 |
mature alpha-beta T cell | 6.63e-07 | 9 |
alpha-beta T cell | 6.63e-07 | 9 |
immature T cell | 6.63e-07 | 9 |
mature T cell | 6.63e-07 | 9 |
immature alpha-beta T cell | 6.63e-07 | 9 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.