FFCP PHASE1:Hg19::chr8:125639273..125639286,+: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=NA|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript|HGNC=NA|TSSclassifier=N|UniProt=NA|association_with_transcript=NA|coexpression_cluster_id=C164|description=CAGE_peak_at_chr8:125639273..125639286,+|id=chr8:125639273..125639286,+|ontology_enrichment_celltype=CL:0000860!8.33e-38!45;CL:0002057!2.29e-32!42;CL:0002009!3.33e-25!65;CL:0002194!3.92e-24!63;CL:0000576!3.92e-24!63;CL:0000040!3.92e-24!63;CL:0000559!3.92e-24!63;CL:0000766!4.30e-24!76;CL:0000557!2.09e-22!71;CL:0000839!5.82e-21!70;CL:0000763!2.00e-17!112;CL:0000049!2.00e-17!112;CL:0000738!7.17e-13!140;CL:0002087!5.18e-12!119;CL:0000037!1.82e-10!172;CL:0000566!1.82e-10!172;CL:0002031!1.94e-10!124;CL:0002032!9.48e-10!165;CL:0000837!9.48e-10!165;CL:0000988!2.14e-09!182;CL:0000767!4.13e-09!3;CL:0002150!7.25e-08!3;CL:0000861!7.25e-08!3;CL:0000063!4.98e-07!578|ontology_enrichment_celltype_v019=CL:0000860;2.87e-18;33!CL:0002057;2.87e-18;33!CL:0000473;2.24e-12;39!CL:0000234;2.24e-12;39!CL:0000766;2.40e-10;69!CL:0000576;1.29e-08;48!CL:0002178;1.82e-07;3!CL:0000767;2.79e-07;3!CL:0000763;7.32e-07;100|ontology_enrichment_celltype_v019_2=CL:0000860,2.76e-15,42;CL:0002057,2.76e-15,42;CL:0000473,2.30e-13,48;CL:0000234,2.30e-13,48;CL:0000766,9.57e-12,72;CL:0002194,1.15e-10,59;CL:0000576,1.15e-10,59;CL:0000040,1.15e-10,59;CL:0000559,1.15e-10,59;CL:0002009,2.57e-10,61;CL:0000839,1.56e-09,66;CL:0000557,2.17e-09,67;CL:0000763,9.61e-08,108;CL:0000049,9.61e-08,108;CL:0002178,1.82e-07,3;CL:0000767,2.97e-07,3|ontology_enrichment_development_v019=CL:0002057;2.10e-13;42|ontology_enrichment_disease=DOID:305!5.00e-14!106;DOID:0050687!5.42e-10!143|ontology_enrichment_disease_v019=DOID:3493;1.43e-10;2|ontology_enrichment_disease_v019_2=DOID:3493,1.43e-10,2|ontology_enrichment_uberon=UBERON:0001737!9.14e-22!9;UBERON:0002371!5.30e-19!80;UBERON:0001474!3.92e-17!86;UBERON:0002390!1.69e-15!102;UBERON:0003061!1.69e-15!102;UBERON:0004765!1.88e-13!101;UBERON:0001434!1.88e-13!101;UBERON:0002193!2.16e-13!112;UBERON:0002405!6.52e-11!115;UBERON:0001557!2.56e-09!19|ontology_enrichment_uberon_v019=|ontology_enrichment_uberon_v019_2=UBERON:0002371,2.85e-08,76;UBERON:0001474,1.17e-07,82;UBERON:0004765,5.78e-07,90;UBERON:0002405,9.81e-07,93|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.18009283054671,0.767658796194425,0.77408061658038,0,0,0.739508020333575,0,0,0,0.553995408531877,0.601633342410425,0.651032612147555,0,0,0,0.145398238779565,0,0.242584061187816,0.697287110717054,0.411167888021826,0.929119112685311,0.28769239232215,1.0246428261164,0.945928919554341,0,0.645484683583826,2.70852973188684,0.188242339542605,0.272906150057846,0.449446968890169,0.306083892370903,0.641858054152187,0,0,0,0.426224750532694,0,1.13477044938228,0,0,0.521482918420201,1.52032191293582,0.605399502633369,1.47311054395026,2.21523671208619,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.364295288292542,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.118306800039844,0.168584690078102,0.482022059766964,0.55146986366197,0.653638332277218,0.949082476444386,0.404493924480493,0.588664395376038,1.92373578473195,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.128343036279748,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.215714200818617,0.106727557803444,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.105551628892876,0,0,0,0,0,0,0.254876273045038,0,0.223874754722178,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0962221127255121,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.835218521685727,0,0,0,0,0.37428108081644,0,0,0,0,0.23874448473769,0,0,0,0,0.111308705022906,0,0,0,0,0,0,0,0,0.269605053441981,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.23056390438806,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.489698424477443,0,0,0,0,0,0,0,0,0,0,0,0,0.19566461893209,0,0,0,0,0,0,0,0,0,0,0,0,0,0.347119476670262,0.391969589657511,0,0,0,0.290268993867255,0.0730893170861856,0.656923656425674,0,0,0,0,0,0,0,0.320635281006135,0,0.19980960958213,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.399358000997982,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.77380195455795,0,0.670869375198532,0.0788057072991982,0,0,0,0,0,0,0,0,0,0,0,0.492555124496034,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.19170628885091,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.214821114084977,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.139879507719444,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.196295437002051,0.11796972334774,0.733714394086716,0,0,0,0,0,0.40341013740704,0,0,0,0.147856086217045,0,0,0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| ||
|DPIdataset=robustDPI | |||
|EntrezGene=NA | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |||
|TSSclassifier=N | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|coexpression_cluster_id=C164 | |||
|description=CAGE_peak_at_chr8:125639273..125639286,+ | |||
|id=chr8:125639273..125639286,+ | |||
|ontology_enrichment_celltype=CL:0000860!8.33e-38!45;CL:0002057!2.29e-32!42;CL:0002009!3.33e-25!65;CL:0002194!3.92e-24!63;CL:0000576!3.92e-24!63;CL:0000040!3.92e-24!63;CL:0000559!3.92e-24!63;CL:0000766!4.30e-24!76;CL:0000557!2.09e-22!71;CL:0000839!5.82e-21!70;CL:0000763!2.00e-17!112;CL:0000049!2.00e-17!112;CL:0000738!7.17e-13!140;CL:0002087!5.18e-12!119;CL:0000037!1.82e-10!172;CL:0000566!1.82e-10!172;CL:0002031!1.94e-10!124;CL:0002032!9.48e-10!165;CL:0000837!9.48e-10!165;CL:0000988!2.14e-09!182;CL:0000767!4.13e-09!3;CL:0002150!7.25e-08!3;CL:0000861!7.25e-08!3;CL:0000063!4.98e-07!578 | |||
|ontology_enrichment_celltype_v019=CL:0000860;2.87e-18;33!CL:0002057;2.87e-18;33!CL:0000473;2.24e-12;39!CL:0000234;2.24e-12;39!CL:0000766;2.40e-10;69!CL:0000576;1.29e-08;48!CL:0002178;1.82e-07;3!CL:0000767;2.79e-07;3!CL:0000763;7.32e-07;100 | |||
|ontology_enrichment_celltype_v019_2=CL:0000860,2.76e-15,42;CL:0002057,2.76e-15,42;CL:0000473,2.30e-13,48;CL:0000234,2.30e-13,48;CL:0000766,9.57e-12,72;CL:0002194,1.15e-10,59;CL:0000576,1.15e-10,59;CL:0000040,1.15e-10,59;CL:0000559,1.15e-10,59;CL:0002009,2.57e-10,61;CL:0000839,1.56e-09,66;CL:0000557,2.17e-09,67;CL:0000763,9.61e-08,108;CL:0000049,9.61e-08,108;CL:0002178,1.82e-07,3;CL:0000767,2.97e-07,3 | |||
|ontology_enrichment_development_v019=CL:0002057;2.10e-13;42 | |||
|ontology_enrichment_disease=DOID:305!5.00e-14!106;DOID:0050687!5.42e-10!143 | |||
|ontology_enrichment_disease_v019=DOID:3493;1.43e-10;2 | |||
|ontology_enrichment_disease_v019_2=DOID:3493,1.43e-10,2 | |||
|ontology_enrichment_uberon=UBERON:0001737!9.14e-22!9;UBERON:0002371!5.30e-19!80;UBERON:0001474!3.92e-17!86;UBERON:0002390!1.69e-15!102;UBERON:0003061!1.69e-15!102;UBERON:0004765!1.88e-13!101;UBERON:0001434!1.88e-13!101;UBERON:0002193!2.16e-13!112;UBERON:0002405!6.52e-11!115;UBERON:0001557!2.56e-09!19 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002371,2.85e-08,76;UBERON:0001474,1.17e-07,82;UBERON:0004765,5.78e-07,90;UBERON:0002405,9.81e-07,93 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.18009283054671,0.767658796194425,0.77408061658038,0,0,0.739508020333575,0,0,0,0.553995408531877,0.601633342410425,0.651032612147555,0,0,0,0.145398238779565,0,0.242584061187816,0.697287110717054,0.411167888021826,0.929119112685311,0.28769239232215,1.0246428261164,0.945928919554341,0,0.645484683583826,2.70852973188684,0.188242339542605,0.272906150057846,0.449446968890169,0.306083892370903,0.641858054152187,0,0,0,0.426224750532694,0,1.13477044938228,0,0,0.521482918420201,1.52032191293582,0.605399502633369,1.47311054395026,2.21523671208619,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.364295288292542,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.118306800039844,0.168584690078102,0.482022059766964,0.55146986366197,0.653638332277218,0.949082476444386,0.404493924480493,0.588664395376038,1.92373578473195,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.128343036279748,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.215714200818617,0.106727557803444,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.105551628892876,0,0,0,0,0,0,0.254876273045038,0,0.223874754722178,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0962221127255121,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.835218521685727,0,0,0,0,0.37428108081644,0,0,0,0,0.23874448473769,0,0,0,0,0.111308705022906,0,0,0,0,0,0,0,0,0.269605053441981,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.23056390438806,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.489698424477443,0,0,0,0,0,0,0,0,0,0,0,0,0.19566461893209,0,0,0,0,0,0,0,0,0,0,0,0,0,0.347119476670262,0.391969589657511,0,0,0,0.290268993867255,0.0730893170861856,0.656923656425674,0,0,0,0,0,0,0,0.320635281006135,0,0.19980960958213,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.399358000997982,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.77380195455795,0,0.670869375198532,0.0788057072991982,0,0,0,0,0,0,0,0,0,0,0,0.492555124496034,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.19170628885091,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.214821114084977,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.139879507719444,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.196295437002051,0.11796972334774,0.733714394086716,0,0,0,0,0,0.40341013740704,0,0,0,0.147856086217045,0,0,0,0,0,0,0,0,0.127762427639595,0,0,0,0,0.0887023701626388,0,0,0,0.0657727735628491,0,0,0,0,0.280272163313789,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.68732060563215,0,0,0.111855431797792,9.71687312790905,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.2498775702396,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.213233981900981,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | |||
|short_description=p@chr8:125639273..125639286,+ | |||
}} |
Revision as of 03:26, 14 September 2013
Short description: | p@chr8:125639273..125639286, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr8:125639273..125639286, + |
Coexpression cluster: | C164_signet_corpus_optic_mucinous_substantia_salivary_choriocarcinoma |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
classical monocyte | 2.76e-15 | 42 |
CD14-positive, CD16-negative classical monocyte | 2.76e-15 | 42 |
defensive cell | 2.30e-13 | 48 |
phagocyte | 2.30e-13 | 48 |
myeloid leukocyte | 9.57e-12 | 72 |
monopoietic cell | 1.15e-10 | 59 |
monocyte | 1.15e-10 | 59 |
monoblast | 1.15e-10 | 59 |
promonocyte | 1.15e-10 | 59 |
macrophage dendritic cell progenitor | 2.57e-10 | 61 |
myeloid lineage restricted progenitor cell | 1.56e-09 | 66 |
granulocyte monocyte progenitor cell | 2.17e-09 | 67 |
myeloid cell | 9.61e-08 | 108 |
common myeloid progenitor | 9.61e-08 | 108 |
epithelial cell of stomach | 1.82e-07 | 3 |
basophil | 2.97e-07 | 3 |
Ontology term | p-value | n |
---|---|---|
bone marrow | 2.85e-08 | 76 |
bone element | 1.17e-07 | 82 |
skeletal element | 5.78e-07 | 90 |
immune system | 9.81e-07 | 93 |
Ontology term | p-value | n |
---|---|---|
signet ring cell adenocarcinoma | 1.43e-10 | 2 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.