FFCP PHASE1:Mm9::chr4:33397365..33397378,+: Difference between revisions
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{{FFCP | {{FFCP|EntrezGene=24018|HGNC=|MCL_coexpression_id=7|UniProt=Q3TUK6|association_with_transcript=46bp_to_ENSMUST00000165807_5end|description=CAGE_peak_2_at_Rngtt_5end|id=chr4:33397365..33397378,+|ontology_enrichment_celltype=CL:0000988!1.67e-07!32;CL:0002032!1.67e-07!32;CL:0000037!1.67e-07!32;CL:0000566!1.67e-07!32;CL:0000837!1.67e-07!32|ontology_enrichment_celltype_v019_2=CL:0000791,3.42e-14,9;CL:0000789,3.42e-14,9;CL:0002420,3.42e-14,9;CL:0002419,3.42e-14,9;CL:0000790,3.42e-14,9;CL:0000838,1.86e-13,12;CL:0000542,2.61e-12,13;CL:0000051,2.61e-12,13;CL:0000624,8.62e-12,8;CL:0000084,2.07e-11,11;CL:0000827,2.07e-11,11;CL:0000988,4.07e-11,32;CL:0002032,4.07e-11,32;CL:0000037,4.07e-11,32;CL:0000837,4.07e-11,32;CL:0000738,4.46e-09,17;CL:0002087,4.46e-09,17;CL:0002320,3.20e-08,46;CL:0000134,3.20e-08,46;CL:0000893,1.52e-07,6;CL:0002489,1.52e-07,6;CL:0000898,1.52e-07,6;CL:0000809,1.52e-07,6;CL:0000810,1.52e-07,6;CL:0000895,1.52e-07,6;CL:0000808,1.52e-07,6;CL:0000894,1.52e-07,6;CL:0000806,1.52e-07,6;CL:0000807,1.52e-07,6;CL:0000805,1.52e-07,6;CL:0002425,1.52e-07,6;CL:0002436,1.52e-07,6;CL:0002427,1.52e-07,6;CL:0002428,1.52e-07,6;CL:0002429,1.52e-07,6;CL:0002433,1.52e-07,6;CL:0002431,1.52e-07,6;CL:0002432,1.52e-07,6;CL:0002031,3.91e-07,25|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0004177!1.49e-09!29;UBERON:0002193!2.95e-09!48;UBERON:0002390!1.69e-08!45;UBERON:0003061!1.69e-08!45;UBERON:0002370!2.29e-07!23;UBERON:0000974!2.29e-07!23;UBERON:0004807!2.29e-07!23;UBERON:0005058!2.29e-07!23;UBERON:0003351!2.29e-07!23;UBERON:0009113!2.29e-07!23;UBERON:0003295!2.29e-07!23;UBERON:0009722!2.29e-07!23;UBERON:0005562!2.29e-07!23;UBERON:0007690!2.29e-07!23|ontology_enrichment_uberon_v019_2=UBERON:0002370,3.84e-13,23;UBERON:0000974,3.84e-13,23;UBERON:0004807,3.84e-13,23;UBERON:0005058,3.84e-13,23;UBERON:0003351,3.84e-13,23;UBERON:0009113,3.84e-13,23;UBERON:0003295,3.84e-13,23;UBERON:0009722,3.84e-13,23;UBERON:0005562,3.84e-13,23;UBERON:0007690,3.84e-13,23;UBERON:0006562,1.72e-12,24;UBERON:0003408,1.72e-12,24;UBERON:0001557,1.72e-12,24;UBERON:0001042,1.72e-12,24;UBERON:0008814,1.72e-12,24;UBERON:0009145,1.72e-12,24;UBERON:0000072,7.93e-11,27;UBERON:0004177,6.53e-10,29;UBERON:0005057,6.53e-10,29;UBERON:0000077,2.02e-09,35;UBERON:0003929,2.54e-08,55;UBERON:0002384,3.20e-08,46;UBERON:0002390,9.34e-08,45;UBERON:0003061,9.34e-08,45;UBERON:0007811,1.62e-07,36;UBERON:0002193,4.30e-07,48;UBERON:0002405,4.30e-07,48|phase1_expression=0,1.39590163055744,2.27499619694768,1.81478526784098,0.500895729946347,0.33575854382378,0.700837921786577,1.29123323441576,18.3025338797167,18.7251621057595,0.34243593645101,0.239316476986009,1.71200729931206,1.31130603628496,0.333109761815663,0.404950534779652,0.699561878128147,0.157731082679119,0.411343300817216,0,0,0.397163804803541,0,0.319984845586813,0.68822784320151,1.72269589234506,0.430761996159075,0.430942465371778,0.190023419456374,0,0.443461021310609,0,1.23012957516914,0,0.288851619751275,0.166234645358492,0.612508068787107,0.837063261473815,0.7813353445238,0.523523743973798,1.76469446409304,1.36609096991689,1.45653105909346,0,0,0,0,0,0,0,0,0,1.67782606057736,4.35217285206807,3.02484419228218,0,0,0,0.202316460859598,0,0,0,0,0,0,0,0,0,0.311068836925433,0,0,0,0,0.367472397644862,0.191690942036473,0,0,0,0.153606533256243,0.263772575460388,0.0914876436024097,0.52091337055676,0,0,0,0,0,0,0.151452386666368,0.302286240427142,2.89864488701678,0,0.679971333707751,0,0,0,0.140444420131752,0,0,0,0.281686839553361,0,0,0,0,0,0,0.22836775943812,0.258937883647172,0,0.520455980298408,0.608930956624282,0.461230994512117,0.452167921657868,0.352766121407114,0,0,0,0,0.323533699894818,0,1.45462575940567,0,0,0,0,1.31796636956512,2.39961092397363,0.762421362438388,0,0,0,0,0,0,0,0.305518091550949,0,0,0,0.650602214813519,0.229902104433473,0,0.30140963567143,0.204109497453984,0.12811372028485,0.0937017245597288,0,0,0.189106080167819,0,0.219195732427575,0,0,0,0,1.40442637462647,1.02939162845886,0.852490498186778,0.621377317606506,0.234526059981096,0,0,0,0,0.232533944750408,0,0.350296027101508,0,0,0,0,0,0,0.210289948564127,0.205809224758569,0,0.264450566663544,0.213288250535234,0,0,0,0,0.190225626112559,0,0.329397909448022,0.251335208800269,0,0.19496408711912,0,0,0.199141273254367,0.379335801906163,0.114248512609729,0,0,0,0,0.126473074248515,0,0.31399745568275,0.370191491765402,0.296452627087149,0.667380422864376,0.393117990226406,0,0.405720242777006,0,0,0.287696137450811,0,0.274561413188081,0,0,0,0,0,0,0.184753190166605,0.37898282354097,0,0,0,0.167506257441816,0,0,0,0,0,0.163863314715738,0.172684981865896,0,0,0.54390568381871,0,0,0.160550589987792,0.117211686592203,0.163934945376675,0,0.631016438832513,0,0.861693590931196,0.238968797952552,0.222798674082394,0.283076530788832,0.404810701674894,0.876767573733936,0,0,0,0.178065603667255,0.325773918707152,0,0,0.485561272309963,0,0,0,0,0,0.363533729477506,0,0,0,0,0,0,0,0.214337035031592,0.177340233642274,0.178368817602071,0.164549020602121,0,0.23467170806371,0,0,0.16488625294148,0,0.0603129249281559,0,0,0,0.18542530201051,0.683483523191411,0.412773735926445,0.555583582109135,0.565105371014073,0.410082683163076,0.457556346413045,1.18984900995699,2.23922323717853,1.24379976423981,0,0.316335993581135,0.406638934253697,0.108005340821801,0.209088296014469,0,0,0.0826534557253359,0,0,0,0,0.448549638131936,0.165458490457098,0.194451188344048,0.516639293910924,0.168956125490778,0.58678619322877,0.781226309063701,2.51662426621706,1.20792060413003,1.44015003128933,0.948033361884535,0,0.205421914329655,1.03936658382236,0.358053391334963,0.993406773906324,1.08175904567972,0.590758108698309,1.11063094942962,1.5241361331,1.31074040677893,1.46186821109629,1.15454209968395,1.28564592399726,0,0.443971906748129,0.538283139656854,0.671538465456314,0,0,0.183151624267265,0,0,0,0,0.572895513439397,0,0,0,0,0,0,0,0.207574695168353,0.399024873401031,0.170733605754134,0,0.419226325255965,0,0.222246727801615,0,0,0,0.25347929989024,0,0,0.128050304809739,0.229741875822453,0,0,0.192909220463705,0.412085900803307,0.294397840268795,0,0.177475806159338,0,0.145346416632329,0.282328141245992,0,0.182927972872773,0,0.271608227691724,0,0.118635018124174,0,0,0,0.192906610981141,0,0,0.214871054048298,0.382576664137687,0,0.231867835620421|short_description=p2@Rngtt}} | ||
|EntrezGene=24018 | |||
|HGNC= | |||
|MCL_coexpression_id=7 | |||
|UniProt=Q3TUK6 | |||
|association_with_transcript=46bp_to_ENSMUST00000165807_5end | |||
|description=CAGE_peak_2_at_Rngtt_5end | |||
|id=chr4:33397365..33397378,+ | |||
|ontology_enrichment_celltype=CL:0000988!1.67e-07!32;CL:0002032!1.67e-07!32;CL:0000037!1.67e-07!32;CL:0000566!1.67e-07!32;CL:0000837!1.67e-07!32 | |||
|ontology_enrichment_celltype_v019_2=CL:0000791,3.42e-14,9;CL:0000789,3.42e-14,9;CL:0002420,3.42e-14,9;CL:0002419,3.42e-14,9;CL:0000790,3.42e-14,9;CL:0000838,1.86e-13,12;CL:0000542,2.61e-12,13;CL:0000051,2.61e-12,13;CL:0000624,8.62e-12,8;CL:0000084,2.07e-11,11;CL:0000827,2.07e-11,11;CL:0000988,4.07e-11,32;CL:0002032,4.07e-11,32;CL:0000037,4.07e-11,32;CL:0000837,4.07e-11,32;CL:0000738,4.46e-09,17;CL:0002087,4.46e-09,17;CL:0002320,3.20e-08,46;CL:0000134,3.20e-08,46;CL:0000893,1.52e-07,6;CL:0002489,1.52e-07,6;CL:0000898,1.52e-07,6;CL:0000809,1.52e-07,6;CL:0000810,1.52e-07,6;CL:0000895,1.52e-07,6;CL:0000808,1.52e-07,6;CL:0000894,1.52e-07,6;CL:0000806,1.52e-07,6;CL:0000807,1.52e-07,6;CL:0000805,1.52e-07,6;CL:0002425,1.52e-07,6;CL:0002436,1.52e-07,6;CL:0002427,1.52e-07,6;CL:0002428,1.52e-07,6;CL:0002429,1.52e-07,6;CL:0002433,1.52e-07,6;CL:0002431,1.52e-07,6;CL:0002432,1.52e-07,6;CL:0002031,3.91e-07,25 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0004177!1.49e-09!29;UBERON:0002193!2.95e-09!48;UBERON:0002390!1.69e-08!45;UBERON:0003061!1.69e-08!45;UBERON:0002370!2.29e-07!23;UBERON:0000974!2.29e-07!23;UBERON:0004807!2.29e-07!23;UBERON:0005058!2.29e-07!23;UBERON:0003351!2.29e-07!23;UBERON:0009113!2.29e-07!23;UBERON:0003295!2.29e-07!23;UBERON:0009722!2.29e-07!23;UBERON:0005562!2.29e-07!23;UBERON:0007690!2.29e-07!23 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002370,3.84e-13,23;UBERON:0000974,3.84e-13,23;UBERON:0004807,3.84e-13,23;UBERON:0005058,3.84e-13,23;UBERON:0003351,3.84e-13,23;UBERON:0009113,3.84e-13,23;UBERON:0003295,3.84e-13,23;UBERON:0009722,3.84e-13,23;UBERON:0005562,3.84e-13,23;UBERON:0007690,3.84e-13,23;UBERON:0006562,1.72e-12,24;UBERON:0003408,1.72e-12,24;UBERON:0001557,1.72e-12,24;UBERON:0001042,1.72e-12,24;UBERON:0008814,1.72e-12,24;UBERON:0009145,1.72e-12,24;UBERON:0000072,7.93e-11,27;UBERON:0004177,6.53e-10,29;UBERON:0005057,6.53e-10,29;UBERON:0000077,2.02e-09,35;UBERON:0003929,2.54e-08,55;UBERON:0002384,3.20e-08,46;UBERON:0002390,9.34e-08,45;UBERON:0003061,9.34e-08,45;UBERON:0007811,1.62e-07,36;UBERON:0002193,4.30e-07,48;UBERON:0002405,4.30e-07,48 | |||
|phase1_expression=0,1.39590163055744,2.27499619694768,1.81478526784098,0.500895729946347,0.33575854382378,0.700837921786577,1.29123323441576,18.3025338797167,18.7251621057595,0.34243593645101,0.239316476986009,1.71200729931206,1.31130603628496,0.333109761815663,0.404950534779652,0.699561878128147,0.157731082679119,0.411343300817216,0,0,0.397163804803541,0,0.319984845586813,0.68822784320151,1.72269589234506,0.430761996159075,0.430942465371778,0.190023419456374,0,0.443461021310609,0,1.23012957516914,0,0.288851619751275,0.166234645358492,0.612508068787107,0.837063261473815,0.7813353445238,0.523523743973798,1.76469446409304,1.36609096991689,1.45653105909346,0,0,0,0,0,0,0,0,0,1.67782606057736,4.35217285206807,3.02484419228218,0,0,0,0.202316460859598,0,0,0,0,0,0,0,0,0,0.311068836925433,0,0,0,0,0.367472397644862,0.191690942036473,0,0,0,0.153606533256243,0.263772575460388,0.0914876436024097,0.52091337055676,0,0,0,0,0,0,0.151452386666368,0.302286240427142,2.89864488701678,0,0.679971333707751,0,0,0,0.140444420131752,0,0,0,0.281686839553361,0,0,0,0,0,0,0.22836775943812,0.258937883647172,0,0.520455980298408,0.608930956624282,0.461230994512117,0.452167921657868,0.352766121407114,0,0,0,0,0.323533699894818,0,1.45462575940567,0,0,0,0,1.31796636956512,2.39961092397363,0.762421362438388,0,0,0,0,0,0,0,0.305518091550949,0,0,0,0.650602214813519,0.229902104433473,0,0.30140963567143,0.204109497453984,0.12811372028485,0.0937017245597288,0,0,0.189106080167819,0,0.219195732427575,0,0,0,0,1.40442637462647,1.02939162845886,0.852490498186778,0.621377317606506,0.234526059981096,0,0,0,0,0.232533944750408,0,0.350296027101508,0,0,0,0,0,0,0.210289948564127,0.205809224758569,0,0.264450566663544,0.213288250535234,0,0,0,0,0.190225626112559,0,0.329397909448022,0.251335208800269,0,0.19496408711912,0,0,0.199141273254367,0.379335801906163,0.114248512609729,0,0,0,0,0.126473074248515,0,0.31399745568275,0.370191491765402,0.296452627087149,0.667380422864376,0.393117990226406,0,0.405720242777006,0,0,0.287696137450811,0,0.274561413188081,0,0,0,0,0,0,0.184753190166605,0.37898282354097,0,0,0,0.167506257441816,0,0,0,0,0,0.163863314715738,0.172684981865896,0,0,0.54390568381871,0,0,0.160550589987792,0.117211686592203,0.163934945376675,0,0.631016438832513,0,0.861693590931196,0.238968797952552,0.222798674082394,0.283076530788832,0.404810701674894,0.876767573733936,0,0,0,0.178065603667255,0.325773918707152,0,0,0.485561272309963,0,0,0,0,0,0.363533729477506,0,0,0,0,0,0,0,0.214337035031592,0.177340233642274,0.178368817602071,0.164549020602121,0,0.23467170806371,0,0,0.16488625294148,0,0.0603129249281559,0,0,0,0.18542530201051,0.683483523191411,0.412773735926445,0.555583582109135,0.565105371014073,0.410082683163076,0.457556346413045,1.18984900995699,2.23922323717853,1.24379976423981,0,0.316335993581135,0.406638934253697,0.108005340821801,0.209088296014469,0,0,0.0826534557253359,0,0,0,0,0.448549638131936,0.165458490457098,0.194451188344048,0.516639293910924,0.168956125490778,0.58678619322877,0.781226309063701,2.51662426621706,1.20792060413003,1.44015003128933,0.948033361884535,0,0.205421914329655,1.03936658382236,0.358053391334963,0.993406773906324,1.08175904567972,0.590758108698309,1.11063094942962,1.5241361331,1.31074040677893,1.46186821109629,1.15454209968395,1.28564592399726,0,0.443971906748129,0.538283139656854,0.671538465456314,0,0,0.183151624267265,0,0,0,0,0.572895513439397,0,0,0,0,0,0,0,0.207574695168353,0.399024873401031,0.170733605754134,0,0.419226325255965,0,0.222246727801615,0,0,0,0.25347929989024,0,0,0.128050304809739,0.229741875822453,0,0,0.192909220463705,0.412085900803307,0.294397840268795,0,0.177475806159338,0,0.145346416632329,0.282328141245992,0,0.182927972872773,0,0.271608227691724,0,0.118635018124174,0,0,0,0.192906610981141,0,0,0.214871054048298,0.382576664137687,0,0.231867835620421 | |||
|short_description=p2@Rngtt | |||
}} |
Revision as of 04:52, 14 September 2013
Short description: | p2@Rngtt |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_2_at_Rngtt_5end |
Coexpression cluster: | MCL_coexpression_mm9:7 |
Association with transcript: | 46bp_to_ENSMUST00000165807_5end |
EntrezGene: | Rngtt |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
thymus | 3.84e-13 | 23 |
neck | 3.84e-13 | 23 |
respiratory system epithelium | 3.84e-13 | 23 |
hemolymphoid system gland | 3.84e-13 | 23 |
pharyngeal epithelium | 3.84e-13 | 23 |
thymic region | 3.84e-13 | 23 |
pharyngeal gland | 3.84e-13 | 23 |
entire pharyngeal arch endoderm | 3.84e-13 | 23 |
thymus primordium | 3.84e-13 | 23 |
early pharyngeal endoderm | 3.84e-13 | 23 |
pharynx | 1.72e-12 | 24 |
gland of gut | 1.72e-12 | 24 |
upper respiratory tract | 1.72e-12 | 24 |
chordate pharynx | 1.72e-12 | 24 |
pharyngeal arch system | 1.72e-12 | 24 |
pharyngeal region of foregut | 1.72e-12 | 24 |
segment of respiratory tract | 7.93e-11 | 27 |
hemopoietic organ | 6.53e-10 | 29 |
immune organ | 6.53e-10 | 29 |
mixed endoderm/mesoderm-derived structure | 2.02e-09 | 35 |
gut epithelium | 2.54e-08 | 55 |
connective tissue | 3.20e-08 | 46 |
hematopoietic system | 9.34e-08 | 45 |
blood island | 9.34e-08 | 45 |
craniocervical region | 1.62e-07 | 36 |
hemolymphoid system | 4.30e-07 | 48 |
immune system | 4.30e-07 | 48 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.