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FFCP PHASE1:Mm9::chr5:111082367..111082441,-: Difference between revisions

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{{FFCP
{{FFCP|EntrezGene=100608|HGNC=|MCL_coexpression_id=155|UniProt=Q8BHY2|association_with_transcript=0bp_to_ENSMUST00000042147,ENSMUST00000124612,ENSMUST00000145712,NM_153570,uc008yrd.1_5end|description=CAGE_peak_1_at_Noc4l_5end|id=chr5:111082367..111082441,-|ontology_enrichment_celltype=CL:0000988!1.80e-13!32;CL:0002032!1.80e-13!32;CL:0000037!1.80e-13!32;CL:0000566!1.80e-13!32;CL:0000837!1.80e-13!32;CL:0002320!6.04e-11!46;CL:0000134!6.04e-11!46;CL:0000219!8.23e-11!54;CL:0002031!8.18e-10!25;CL:0000049!3.52e-08!19;CL:0000063!2.98e-07!66|ontology_enrichment_celltype_v019_2=CL:0000988,1.80e-13,32;CL:0002032,1.80e-13,32;CL:0000037,1.80e-13,32;CL:0000837,1.80e-13,32;CL:0002320,6.04e-11,46;CL:0000134,6.04e-11,46;CL:0000219,8.23e-11,54;CL:0002031,8.18e-10,25;CL:0000049,3.52e-08,19|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0002390!1.69e-14!45;UBERON:0003061!1.69e-14!45;UBERON:0002405!1.18e-13!70;UBERON:0002193!6.49e-13!48;UBERON:0002384!6.04e-11!46;UBERON:0005057!3.90e-10!51;UBERON:0004177!6.41e-10!29;UBERON:0000072!9.45e-09!27;UBERON:0002370!4.83e-08!23;UBERON:0000974!4.83e-08!23;UBERON:0004807!4.83e-08!23;UBERON:0005058!4.83e-08!23;UBERON:0003351!4.83e-08!23;UBERON:0009113!4.83e-08!23;UBERON:0003295!4.83e-08!23;UBERON:0009722!4.83e-08!23;UBERON:0005562!4.83e-08!23;UBERON:0007690!4.83e-08!23;UBERON:0006562!1.91e-07!24;UBERON:0001557!1.91e-07!24;UBERON:0001042!1.91e-07!24;UBERON:0008814!1.91e-07!24;UBERON:0009145!1.91e-07!24;UBERON:0003408!3.88e-07!24;UBERON:0002368!6.54e-07!60|ontology_enrichment_uberon_v019_2=UBERON:0002390,1.69e-14,45;UBERON:0003061,1.69e-14,45;UBERON:0002193,6.49e-13,48;UBERON:0002405,6.49e-13,48;UBERON:0002384,6.04e-11,46;UBERON:0004177,6.41e-10,29;UBERON:0005057,6.41e-10,29;UBERON:0000072,9.45e-09,27;UBERON:0002370,4.83e-08,23;UBERON:0000974,4.83e-08,23;UBERON:0004807,4.83e-08,23;UBERON:0005058,4.83e-08,23;UBERON:0003351,4.83e-08,23;UBERON:0009113,4.83e-08,23;UBERON:0003295,4.83e-08,23;UBERON:0009722,4.83e-08,23;UBERON:0005562,4.83e-08,23;UBERON:0007690,4.83e-08,23;UBERON:0006562,1.91e-07,24;UBERON:0001557,1.91e-07,24;UBERON:0001042,1.91e-07,24;UBERON:0008814,1.91e-07,24;UBERON:0009145,1.91e-07,24;UBERON:0003408,3.88e-07,24;UBERON:0000077,5.27e-07,35;UBERON:0002368,6.54e-07,60|phase1_expression=19.8584570409945,3.14077866875425,2.72999543633722,7.56160528267075,5.50985302940982,20.3133919013387,20.7915250130018,32.5390775072772,136.00190559851,110.712520950303,103.586870776431,95.567046476413,27.9057189787865,28.5864715910121,48.6340252250868,39.2802018736262,35.6776557845355,29.8111746263535,23.1723392793699,26.3121584114779,22.4514285998824,36.0426152859214,28.9931765944218,14.7193028969934,13.7645568640302,6.89078356938024,9.47676391549965,14.2211013572687,12.7315691035771,10.837295579677,14.6342137032501,74.9336194682365,116.862309641068,63.3926724061755,42.1723364836861,37.2365605603023,37.7713309085383,7.95210098400125,17.9707129240474,5.75876118371178,5.88231488031014,4.78131839470912,7.76816564849846,13.5968563413623,13.1790010585369,18.3546752161682,25.8189143634853,23.1106665763273,27.460772841809,16.3321115222398,22.1178546168073,21.5628846547457,27.0129995752956,29.7398478224651,30.5845357219642,15.4355661621568,14.0401385569991,12.8918023069361,21.647861311977,24.8625760257855,21.5502677192101,26.0910289693232,22.2323699027785,24.7472422252385,35.5991890524111,27.7087244828979,35.0532129306534,38.806048837477,24.6781277294177,26.191152036348,29.6558195505449,25.9942395807461,26.0624878322904,24.3756690437759,26.9325773561244,16.5459381589804,9.91042928994498,17.6208526557559,14.2854075928306,25.0583946687368,24.2442255546386,23.962015045611,15.0758819460746,11.8180148106653,14.3630352910202,19.1508580557884,19.7896636310753,19.0127434741807,26.1255366999485,19.3463193873371,19.1310562543107,19.7897491705719,34.6785380190953,17.810205324048,20.1430689408777,20.6092368064774,15.308441794361,14.827438064291,15.3273742715693,15.546941278455,15.6336195952115,7.69958864485907,20.3844191765317,35.5533351576666,35.7210217668503,34.2035818391383,38.9253822661383,14.2729849648825,23.8222852955398,15.8833088799362,32.9622120855658,23.748307308347,20.9860102503013,19.5939432718409,21.0483785772912,15.4569907335501,11.8653584512499,9.83275627055399,29.1921482143459,19.0884882937943,22.5258348829601,16.9706338597328,18.6391761218122,17.2740670236813,18.2218634927706,15.8383374229327,35.7049071027642,50.3918294034462,39.5188406197231,18.4242486467932,19.2150253183823,26.3874139437015,19.1206752211504,24.0372529890511,19.7398642331582,13.4660248346239,21.2844270447161,17.2925689148029,16.6797020566225,16.2040229032585,26.5445703643916,24.8294272788151,23.2280147448901,16.8789395976001,18.7100372666152,21.5231050078548,16.3041000733928,14.7460921321239,47.6405264381581,30.0678667466833,26.7445708729202,26.0842921588814,24.7462051810782,15.3230953269753,22.0186885956499,22.2918378836712,59.688120921625,43.7491442095016,52.5702473881846,23.40521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|EntrezGene=100608
|HGNC=
|MCL_coexpression_id=155
|UniProt=Q8BHY2
|association_with_transcript=0bp_to_ENSMUST00000042147,ENSMUST00000124612,ENSMUST00000145712,NM_153570,uc008yrd.1_5end
|description=CAGE_peak_1_at_Noc4l_5end
|id=chr5:111082367..111082441,-
|ontology_enrichment_celltype=CL:0000988!1.80e-13!32;CL:0002032!1.80e-13!32;CL:0000037!1.80e-13!32;CL:0000566!1.80e-13!32;CL:0000837!1.80e-13!32;CL:0002320!6.04e-11!46;CL:0000134!6.04e-11!46;CL:0000219!8.23e-11!54;CL:0002031!8.18e-10!25;CL:0000049!3.52e-08!19;CL:0000063!2.98e-07!66
|ontology_enrichment_celltype_v019_2=CL:0000988,1.80e-13,32;CL:0002032,1.80e-13,32;CL:0000037,1.80e-13,32;CL:0000837,1.80e-13,32;CL:0002320,6.04e-11,46;CL:0000134,6.04e-11,46;CL:0000219,8.23e-11,54;CL:0002031,8.18e-10,25;CL:0000049,3.52e-08,19
|ontology_enrichment_disease=
|ontology_enrichment_disease_v019_2=
|ontology_enrichment_uberon=UBERON:0002390!1.69e-14!45;UBERON:0003061!1.69e-14!45;UBERON:0002405!1.18e-13!70;UBERON:0002193!6.49e-13!48;UBERON:0002384!6.04e-11!46;UBERON:0005057!3.90e-10!51;UBERON:0004177!6.41e-10!29;UBERON:0000072!9.45e-09!27;UBERON:0002370!4.83e-08!23;UBERON:0000974!4.83e-08!23;UBERON:0004807!4.83e-08!23;UBERON:0005058!4.83e-08!23;UBERON:0003351!4.83e-08!23;UBERON:0009113!4.83e-08!23;UBERON:0003295!4.83e-08!23;UBERON:0009722!4.83e-08!23;UBERON:0005562!4.83e-08!23;UBERON:0007690!4.83e-08!23;UBERON:0006562!1.91e-07!24;UBERON:0001557!1.91e-07!24;UBERON:0001042!1.91e-07!24;UBERON:0008814!1.91e-07!24;UBERON:0009145!1.91e-07!24;UBERON:0003408!3.88e-07!24;UBERON:0002368!6.54e-07!60
|ontology_enrichment_uberon_v019_2=UBERON:0002390,1.69e-14,45;UBERON:0003061,1.69e-14,45;UBERON:0002193,6.49e-13,48;UBERON:0002405,6.49e-13,48;UBERON:0002384,6.04e-11,46;UBERON:0004177,6.41e-10,29;UBERON:0005057,6.41e-10,29;UBERON:0000072,9.45e-09,27;UBERON:0002370,4.83e-08,23;UBERON:0000974,4.83e-08,23;UBERON:0004807,4.83e-08,23;UBERON:0005058,4.83e-08,23;UBERON:0003351,4.83e-08,23;UBERON:0009113,4.83e-08,23;UBERON:0003295,4.83e-08,23;UBERON:0009722,4.83e-08,23;UBERON:0005562,4.83e-08,23;UBERON:0007690,4.83e-08,23;UBERON:0006562,1.91e-07,24;UBERON:0001557,1.91e-07,24;UBERON:0001042,1.91e-07,24;UBERON:0008814,1.91e-07,24;UBERON:0009145,1.91e-07,24;UBERON:0003408,3.88e-07,24;UBERON:0000077,5.27e-07,35;UBERON:0002368,6.54e-07,60
|phase1_expression=19.8584570409945,3.14077866875425,2.72999543633722,7.56160528267075,5.50985302940982,20.3133919013387,20.7915250130018,32.5390775072772,136.00190559851,110.712520950303,103.586870776431,95.567046476413,27.9057189787865,28.5864715910121,48.6340252250868,39.2802018736262,35.6776557845355,29.8111746263535,23.1723392793699,26.3121584114779,22.4514285998824,36.0426152859214,28.9931765944218,14.7193028969934,13.7645568640302,6.89078356938024,9.47676391549965,14.2211013572687,12.7315691035771,10.837295579677,14.6342137032501,74.9336194682365,116.862309641068,63.3926724061755,42.1723364836861,37.2365605603023,37.7713309085383,7.95210098400125,17.9707129240474,5.75876118371178,5.88231488031014,4.78131839470912,7.76816564849846,13.5968563413623,13.1790010585369,18.3546752161682,25.8189143634853,23.1106665763273,27.460772841809,16.3321115222398,22.1178546168073,21.5628846547457,27.0129995752956,29.7398478224651,30.5845357219642,15.4355661621568,14.0401385569991,12.8918023069361,21.647861311977,24.8625760257855,21.5502677192101,26.0910289693232,22.2323699027785,24.7472422252385,35.5991890524111,27.7087244828979,35.0532129306534,38.806048837477,24.6781277294177,26.191152036348,29.6558195505449,25.9942395807461,26.0624878322904,24.3756690437759,26.9325773561244,16.5459381589804,9.91042928994498,17.6208526557559,14.2854075928306,25.0583946687368,24.2442255546386,23.962015045611,15.0758819460746,11.8180148106653,14.3630352910202,19.1508580557884,19.7896636310753,19.0127434741807,26.1255366999485,19.3463193873371,19.1310562543107,19.7897491705719,34.6785380190953,17.810205324048,20.1430689408777,20.6092368064774,15.308441794361,14.827438064291,15.3273742715693,15.546941278455,15.6336195952115,7.69958864485907,20.3844191765317,35.5533351576666,35.7210217668503,34.2035818391383,38.9253822661383,14.2729849648825,23.8222852955398,15.8833088799362,32.9622120855658,23.748307308347,20.9860102503013,19.5939432718409,21.0483785772912,15.4569907335501,11.8653584512499,9.83275627055399,29.1921482143459,19.0884882937943,22.5258348829601,16.9706338597328,18.6391761218122,17.2740670236813,18.2218634927706,15.8383374229327,35.7049071027642,50.3918294034462,39.5188406197231,18.4242486467932,19.2150253183823,26.3874139437015,19.1206752211504,24.0372529890511,19.7398642331582,13.4660248346239,21.2844270447161,17.2925689148029,16.6797020566225,16.2040229032585,26.5445703643916,24.8294272788151,23.2280147448901,16.8789395976001,18.7100372666152,21.5231050078548,16.3041000733928,14.7460921321239,47.6405264381581,30.0678667466833,26.7445708729202,26.0842921588814,24.7462051810782,15.3230953269753,22.0186885956499,22.2918378836712,59.688120921625,43.7491442095016,52.5702473881846,23.4052122965117,24.6252362980151,17.2859579002574,20.5967919959133,16.3314312350345,14.9639099500757,16.2773761325285,22.8032391189676,17.7483320398098,15.6331857417806,13.6258995185649,13.4574223846121,12.8655988934292,15.5880581856646,13.9574675510787,17.6643556793867,24.4912977462697,6.93879444265976,22.2138475997377,29.2204903233271,25.3137972327878,30.6704557946582,21.176770085451,19.1245117706588,13.8864707062168,17.0830462156024,17.7874871101932,10.5560787696113,14.523822459004,15.9870551437679,23.3693046250098,10.8069024937347,12.7450414882795,32.0538752610708,25.4774183119695,21.4144697778853,22.8089487186752,20.9468686141036,21.2511534267665,16.8209188750524,10.775540802511,12.0889020437859,12.9567022117891,23.1233049127976,64.2353657006962,69.1887662798475,62.961391467759,43.0063457343626,40.2765856786536,24.4440817710163,28.7696137450811,21.8882556146298,21.4157902286704,15.814502718009,17.1184835927512,16.5379966750717,20.7114679916632,24.9362404795458,19.2977408545347,12.5632169313291,30.3186258832776,30.4744505946588,22.2366062365496,23.7037150771387,17.0856382590652,14.7587057349329,13.2690880543303,11.5073655197519,13.730810758224,10.8429242687091,12.6174752331118,11.569893785015,12.150520920847,19.6028669121054,16.86107619838,43.2752560256752,34.7680300343963,15.7339578188036,15.3547309435786,31.1476396215683,19.1877904675323,17.9839685067266,13.6653560503823,13.7870974548991,18.6395662402991,15.3731085116852,13.0215204162863,20.6453457854196,17.2430956167674,12.2539211163422,14.7807805554031,20.4393722699907,27.7782341720918,22.4784003907935,18.9715641418416,22.5666735177937,32.5326052447675,30.5346792534399,20.1807435338811,22.4429438589387,17.2163682848599,19.6405502807848,14.9048829085777,19.250858432775,18.3301319602773,10.5418608574999,19.5957532171555,11.234506989875,23.5880033181016,31.6928775267749,20.1476812929697,19.3300854670078,17.658512942605,21.2268236576736,21.9214763362511,23.2324990983073,9.74427525973573,11.467476698858,20.940554123568,18.0840157899414,19.9032652262914,21.009532544552,22.9797259643086,14.8655226681224,18.913380805072,31.6111129476027,23.3217160798441,34.075793036027,30.5156900347599,38.8211606727711,31.1138315560871,27.026570369023,29.6697078926155,27.7781947346892,14.3200592702267,32.5826073388569,27.0414891278709,20.629020096964,19.2361232333311,20.5260809921407,19.0158728402597,16.7786515122432,13.6113089831695,13.8688021422218,13.0481255748254,64.8246879486819,27.5110444720921,30.9407377154773,28.9732270632631,24.023727166858,20.4436911843842,21.00694571759,25.5200594294142,34.9181616937617,45.9009829569411,44.3566209637113,23.7008340471134,50.2758533919607,42.3169143519088,41.0549800609832,39.3858730468459,40.3323150205968,37.1403939016704,36.7746922664697,28.2706059854813,34.0644425747849,30.0462031707785,28.360243295268,24.822655143205,23.9597649472216,16.5513180039104,42.1773311410723,69.3488111591247,34.0805771219079,12.5573236120924,17.6421526924111,23.2602562819427,22.93741656146,12.0377304968487,27.1080884456192,20.714635642823,31.5092532391668,20.6223818812425,17.8121455140367,25.6833925112498,20.925697507186,17.1122057225204,18.5788387683524,13.9795284172991,35.806634916541,26.7346665178691,26.2929752861367,20.9071776678733,33.7477191831052,18.9358813703515,18.0019849519308,19.7793654949338,14.1204452220399,18.4468964587572,14.9552786935241,16.4104917005886,18.1664524491572,16.4544641680514,15.6798830248824,15.7176918123414,17.2667645657835,14.4681915347779,13.1867488257058,18.1054671765309,15.0862471049583,18.9899112590491,15.4983523465759,15.9881058295561,16.2809228118522,14.4690979494767,22.3172126904783,16.5733918205841,15.0742566368907,17.9565526930476,15.7784574105152,18.0263202747281,20.4615521584845,14.2541893891089,19.2906610981141,25.2308683717325,18.2466654587419,18.693781702202,18.7462565427467,16.9855392722027,16.2307484934295
|short_description=p1@Noc4l
}}

Revision as of 05:56, 14 September 2013

Short description:p1@Noc4l
Species:Mouse (Mus musculus)
DPI dataset: NA
TSS-like-by-RIKEN-classifier(Yes/No): NA
DHS support(Yes/No): NA
Description: CAGE_peak_1_at_Noc4l_5end
Coexpression cluster:MCL_coexpression_mm9:155
Association with transcript: 0bp_to_ENSMUST00000042147, ENSMUST00000124612, ENSMUST00000145712, NM_153570, uc008yrd.1_5end
EntrezGene:Noc4l
Link to Zenbu:ZENBU


View on UCSC genome browser

Mouse over to see Genome browser image, Click image to go to Genome browser


CAGE Expression

Sample

p1@Noc4l

Atoh1+ Inner ear hair cells - organ of corti, pool1.CNhs12533.12158-128G719.86
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13242.11850-124I53.14
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13233.11851-124I62.73
CD326+ enterocyte, pool1.CNhs13542.11848-124I37.56
CD326+ enterocyte, pool2.CNhs13197.11849-124I45.51
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13236.11852-124I720.31
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13210.11853-124I820.79
CD4+CD25+ regulatory T cells, pool2 (Balb_cAJcl).CNhs13221.11818-124E932.54
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool1 (C57BL_6J).CNhs13219.11816-124E7136.00
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool2 (Balb_cAJcl).CNhs13226.11820-124F2110.71
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool1 (C57BL_6J).CNhs13218.11815-124E6103.59
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool2 (Balb_cAJcl).CNhs13225.11819-124F195.57
CD4+CD25-CD44- naive conventional T cells, pool1 (C57BL_6J).CNhs13217.11813-124E427.91
CD4+CD25-CD44- naive conventional T cells, pool2 (Balb_cAJcl).CNhs13220.11817-124E828.59
CD41+ megakaryocyte cancer, donor1.CNhs13079.11774-124A148.63
CD41+ megakaryocyte cancer, donor2.CNhs13213.11776-124A339.28
CD41+ megakaryocyte cancer, donor3.CNhs13506.11778-124A535.68
CD41+ megakaryocyte control, donor1.CNhs13212.11775-124A229.81
CD41+ megakaryocyte control, donor2.CNhs13214.11777-124A423.17
CD41+ megakaryocyte control, donor3.CNhs13201.11779-124A626.31
Clontech Mouse Universal Reference Total RNA, pool1.CNhs10609.10001-101A322.45
EBF KO HPCs induced to T cell, 00hr00min, biol_rep1.CNhs11058.12972-138H236.04
EBF KO HPCs induced to T cell, 00hr00min, biol_rep2.CNhs12980.12988-138I928.99
Follicle Associated Epithelium, pool2.CNhs13211.10262-104D114.72
Follicle Associated Epithelium, pool3.CNhs13200.10263-104D213.76
GP2+ M cell, pool1.CNhs13228.11845-124H96.89
GP2+ M cell, pool2.CNhs13231.11846-124I19.48
GP2+ M cell, pool3.CNhs13240.11847-124I214.22
Ileum epithelium, pool1.CNhs13199.10252-104B912.73
Ileum epithelium, pool2.CNhs13232.10253-104C110.84
Ileum epithelium, treated with RANKL, day03, pool3.CNhs13234.10260-104C814.63
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep1.CNhs12449.13063-139I374.93
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep2.CNhs12668.13129-140G6116.86
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep3.CNhs12770.13195-141E963.39
Lgr5 positive intestinal stem cells, pool1.CNhs12555.12228-129F542.17
Lgr5 positive intestinal stem cells, pool2.CNhs12556.12229-129F637.24
Lgr5 positive intestinal stem cells, pool3.CNhs12557.12230-129F737.77
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor1 (10,11,12 3LL).CNhs12539.12159-128G87.95
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor2 (0127 3LL).CNhs12198.12161-128H117.97
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor3 (0128 3LL).CNhs12542.12163-128H35.76
MC1+Gr1+ myeloid-derived suppressor cells control, donor1 (4,5,6PBS).CNhs12540.12160-128G95.88
MC1+Gr1+ myeloid-derived suppressor cells control, donor2 (0127 PBS).CNhs12541.12162-128H24.78
MC1+Gr1+ myeloid-derived suppressor cells control, donor3 (0128 PBS).CNhs12543.12164-128H47.77
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep1.CNhs11055.11484-119D813.60
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep2.CNhs11056.11485-119D913.18
Mouse Aortic Smooth Muscle cells, donor1.CNhs11297.11299-117B318.35
Mouse Astrocytes - cerebellar, donor1.CNhs13077.11708-123B725.82
Mouse Astrocytes - cerebellar, donor2.CNhs12076.11550-120C223.11
Mouse Astrocytes - hippocampus, donor1.CNhs12129.11709-123B827.46
Mouse Astrocytes - hippocampus, donor2.CNhs12077.11551-120C316.33
Mouse Astrocytes, donor2.CNhs12078.11552-120C422.12
Mouse Astrocytes, donor3.CNhs12107.11633-122C421.56
Mouse CD19+ B Cells, donor1.CNhs13531.11856-125A227.01
Mouse CD4+ T Cells, donor1.CNhs13509.11854-124I929.74
Mouse CD8+ T Cells, donor1.CNhs13511.11855-125A130.58
Mouse Cardiac Myocytes, donor1.CNhs12355.11711-123C115.44
Mouse Cardiac Myocytes, donor2.CNhs12356.11729-123E114.04
Mouse Cardiac Myocytes, donor3.CNhs12353.11634-122C512.89
Mouse Granule cells, donor1.CNhs12131.11713-123C321.65
Mouse Granule cells, donor2.CNhs12357.11731-123E324.86
Mouse Granule cells, donor3.CNhs12108.11636-122C721.55
Mouse Meningeal cells, donor1.CNhs12132.11716-123C626.09
Mouse Meningeal cells, donor3.CNhs12109.11639-122D122.23
Mouse Mesenchymal stem cells - bone marrow derived, donor1.CNhs12628.11717-123C724.75
Mouse Mesenchymal stem cells - bone marrow derived, donor2.CNhs12633.11735-123E735.60
Mouse Mesenchymal stem cells - bone marrow derived, donor3.CNhs12616.11640-122D227.71
Mouse Microglia, donor1.CNhs12629.11718-123C835.05
Mouse Microglia, donor2.CNhs12634.11736-123E838.81
Mouse Neurons - cortical, donor1.CNhs12025.11724-123D524.68
Mouse Neurons - cortical, donor2.CNhs11947.11742-123F526.19
Mouse Neurons - cortical, donor3.CNhs12112.11647-122D929.66
Mouse Neurons - dorsal spinal cord, donor2.CNhs12635.11738-123F125.99
Mouse Neurons - dorsal spinal cord, donor3.CNhs12618.11643-122D526.06
Mouse Neurons - hippocampal, donor1.CNhs12133.11721-123D224.38
Mouse Neurons - hippocampal, donor2.CNhs12359.11739-123F226.93
Mouse Neurons - hippocampal, donor3.CNhs12110.11644-122D616.55
Mouse Neurons - raphe, donor1.CNhs12631.11722-123D39.91
Mouse Neurons - raphe, donor2.CNhs12636.11740-123F317.62
Mouse Neurons - raphe, donor3.CNhs12619.11645-122D714.29
Mouse Neurons - striatal, donor1.CNhs12134.11723-123D425.06
Mouse Neurons - striatal, donor2.CNhs12360.11741-123F424.24
Mouse Neurons - striatal, donor3.CNhs12111.11646-122D823.96
Mouse Neurons - substantia nigra, donor4, tech_rep1.CNhs12612.11489-119E415.08
Mouse Neurons - substantia nigra, donor5.CNhs12614.11490-119E511.82
Mouse Neurons - substantia nigra, donor6.CNhs12643.11770-123I614.36
Mouse Neurons - ventral spinal cord, donor1.CNhs12632.11725-123D619.15
Mouse Neurons - ventral spinal cord, donor2.CNhs12638.11743-123F619.79
Mouse Neurons - ventral spinal cord, donor3.CNhs12113.11648-122E119.01
Mouse Schwann, donor1.CNhs12507.11728-123D926.13
Mouse Schwann, donor2.CNhs12573.11746-123F919.35
Mouse hepatic Sinusoidal Endothelial Cells, donor1.CNhs13209.11830-124G319.13
Mouse hepatic Stellate Cells (lipocyte), donor1.CNhs13196.11825-124F719.79
Mouse hepatocyte, donor1.CNhs13078.11714-123C434.68
Mouse hepatocyte, donor3.CNhs12615.11637-122C817.81
Mouse hepatocyte, donor6.CNhs13090.11822-124F420.14
Mouse hepatocyte, donor8.CNhs13091.11824-124F620.61
SABiosciences XpressRef Mouse Universal Total RNA, pool1.CNhs10611.10003-101A715.31
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep1 (000hC4).CNhs11939.12338-130I714.83
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep2 (000hC5).CNhs13275.12460-132E315.33
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep3 (000hC6).CNhs13324.12582-133I815.55
Sox2+ Supporting cells - organ of corti, pool1.CNhs12532.12157-128G615.63
TSt-4/DLL1 feeder cells, biol_rep1.CNhs13407.12971-138H17.70
TSt-4/DLL1 feeder cells, biol_rep2.CNhs13408.12987-138I820.38
TSt-4/DLL1 feeder cells, biol_rep3.CNhs13409.13003-139B635.55
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep1.CNhs13739.13367-143G135.72
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep2.CNhs13740.13368-143G234.20
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep3.CNhs13741.13369-143G338.93
Universal RNA - Mouse Normal Tissues Biochain, pool1.CNhs10613.10008-101B614.27
accessory axillary lymph node, adult.CNhs10475.1063-29H923.82
adrenal gland, adult.CNhs10508.49-24D715.88
adrenal gland, embryo E14.CNhs11038.406-44C532.96
adrenal gland, embryo E16.CNhs11004.1254-43D623.75
adrenal gland, embryo E17.CNhs11043.1263-45I120.99
adrenal gland, embryo E18.CNhs11026.1262-18F519.59
adrenal gland, neonate N00.CNhs11191.1311-23C121.05
adrenal gland, neonate N25.CNhs11223.1377-27I315.46
amnion, adult pregnant day17.5.CNhs10488.583-22A811.87
aorta, adult.CNhs10498.46-23H19.83
bone (os femoris), adult.CNhs10483.56-12G229.19
bone (os femoris), neonate N02.CNhs11227.1985-43F519.09
bone (os femoris), neonate N16.CNhs11225.1525-43A622.53
bone (os femoris), neonate N20.CNhs11195.1350-25C316.97
cecum, adult.CNhs10467.37-13H418.64
cerebellum, adult.CNhs10494.15-8B217.27
cerebellum, neonate N30.CNhs11135.1395-42I218.22
colon, adult.CNhs10468.36-18H715.84
common myeloid progenitor CMP, biol_rep1.CNhs12550.12122-128C735.70
common myeloid progenitor CMP, biol_rep2.CNhs12203.12125-128D150.39
common myeloid progenitor CMP, biol_rep3.CNhs12551.12128-128D439.52
corpora quadrigemina, adult.CNhs10501.16-22A418.42
corpus striatum, adult.CNhs10487.19-21D819.22
corpus striatum, neonate N00.CNhs11226.630-43F126.39
cortex, adult.CNhs10473.12-14D519.12
cortex, neonate N30.CNhs11107.1392-42F224.04
diencephalon, adult.CNhs10482.20-12F219.74
diencephalon, neonate N30.CNhs11201.1388-42B213.47
epididymis and seminiferous tubule, neonate N00.CNhs11218.1310-23B121.28
epididymis and seminiferous tubule, neonate N30.CNhs11199.1387-42A217.29
epididymis, adult.CNhs10490.58-23B216.68
eyeball, adult.CNhs10484.31-12G416.20
eyeball, embryo E12.CNhs11016.345-16C626.54
eyeball, embryo E14.CNhs10521.399-16E224.83
eyeball, embryo E15.CNhs10593.426-16C923.23
eyeball, embryo E17.CNhs11023.1261-18D416.88
eyeball, neonate N00.CNhs11207.633-15C618.71
eyeball, neonate N01.CNhs11140.1532-43E721.52
eyeball, neonate N02.CNhs11205.1551-44G816.30
eyeball, neonate N16.CNhs11188.777-19A214.75
forelimb, embryo E11.CNhs10596.335-25E247.64
forelimb, embryo E12.CNhs10600.359-14H230.07
forelimb, embryo E13.CNhs10589.384-1E226.74
forelimb, embryo E14.CNhs10577.413-26A826.08
forelimb, embryo E15.CNhs11007.437-20E724.75
forelimb, embryo E17.CNhs10598.1517-43C415.32
forelimb, embryo E18.CNhs11008.1520-43B522.02
gonad, embryo E13.CNhs11044.1564-45I622.29
granulocyte macrophage progenitor GMP, biol_rep1.CNhs12206.12123-128C859.69
granulocyte macrophage progenitor GMP, biol_rep2.CNhs12202.12126-128D243.75
granulocyte macrophage progenitor GMP, biol_rep3.CNhs11928.12129-128D552.57
heart, embryo E11.CNhs10586.331-24E923.41
heart, embryo E12.CNhs11015.353-12F524.63
heart, embryo E13.CNhs11013.376-3I917.29
heart, embryo E14.CNhs10597.403-26D420.60
heart, embryo E15.CNhs11017.431-16C816.33
heart, embryo E16.CNhs11021.457-17C614.96
heart, embryo E17.CNhs11025.479-18E516.28
heart, embryo E18.CNhs11030.1283-20G322.80
heart, neonate N00.CNhs11213.639-21E317.75
heart, neonate N03.CNhs11221.1349-25I215.63
heart, neonate N10.CNhs11118.749-24G113.63
heart, neonate N16.CNhs11209.782-15G113.46
heart, neonate N20.CNhs11127.821-26I612.87
heart, neonate N25.CNhs11196.1351-25D315.59
heart, neonate N30.CNhs11202.1390-42D213.96
hippocampus, adult.CNhs10478.13-16E817.66
hippocampus, neonate N00.CNhs11228.627-43G124.49
intestinal mucosa, adult.CNhs10506.860-29I36.94
intestine, adult.CNhs10496.178-9A322.21
intestine, embryo E12.CNhs11019.1251-16I529.22
intestine, embryo E13.CNhs11010.381-16D525.31
intestine, embryo E15.CNhs10602.976-16D830.67
intestine, embryo E16.CNhs10585.463-22H421.18
intestine, embryo E17.CNhs10582.482-18D319.12
intestine, embryo E18.CNhs10526.1289-20F713.89
intestine, neonate N00.CNhs11126.644-26D117.08
intestine, neonate N01.CNhs11192.1322-23E917.79
intestine, neonate N06.CNhs11102.688-20B810.56
intestine, neonate N07.CNhs11095.720-20F214.52
intestine, neonate N10.CNhs11098.755-23A515.99
intestine, neonate N20.CNhs11187.827-18D123.37
intestine, neonate N25.CNhs11121.1352-25E310.81
intestine, neonate N30.CNhs11131.1384-42G112.75
kidney, embryo E14.CNhs10606.411-4I932.05
kidney, embryo E15.CNhs10997.434-16F825.48
kidney, embryo E16.CNhs10584.464-22A521.41
kidney, embryo E17.CNhs11028.483-18I222.81
kidney, embryo E18.CNhs11001.1288-20C720.95
kidney, neonate N00.CNhs11214.646-21G721.25
kidney, neonate N10.CNhs11206.758-6D516.82
kidney, neonate N20.CNhs11113.832-19I110.78
kidney, neonate N25.CNhs11122.1353-25F312.09
kidney, neonate N30.CNhs11203.1385-42H112.96
liver, adult pregnant day01.CNhs10466.508-5B223.12
liver, embryo E12.CNhs10601.355-15F864.24
liver, embryo E13.CNhs10524.378-3H669.19
liver, embryo E14.CNhs10594.409-16E162.96
liver, embryo E15.CNhs10520.433-16D743.01
liver, embryo E16.CNhs10523.462-17F540.28
liver, embryo E17.CNhs10510.481-18A324.44
liver, embryo E18.CNhs10579.499-43G428.77
liver, neonate N00.CNhs11117.641-24F421.89
liver, neonate N03.CNhs11123.1345-25G221.42
liver, neonate N06.CNhs11101.684-20A815.81
liver, neonate N07.CNhs11103.716-20H217.12
liver, neonate N10.CNhs11115.751-24B916.54
liver, neonate N20.CNhs11220.823-25A320.71
liver, neonate N25.CNhs11198.1368-26H124.94
liver, neonate N30.CNhs11106.1382-42D119.30
lung, adult.CNhs10474.28-22B112.56
lung, embryo E12.CNhs10522.354-16G230.32
lung, embryo E14.CNhs10604.404-26F830.47
lung, embryo E15.CNhs11020.432-17C522.24
lung, embryo E16.CNhs10998.458-17B623.70
lung, embryo E17.CNhs10605.480-44A617.09
lung, embryo E18.CNhs10583.1287-20I614.76
lung, neonate N00.CNhs11224.640-42C613.27
lung, neonate N06.CNhs11212.683-20E511.51
lung, neonate N07.CNhs11111.715-19A313.73
lung, neonate N10.CNhs11219.750-23E610.84
lung, neonate N20.CNhs11109.822-18A412.62
lung, neonate N25.CNhs11119.1359-25C711.57
lung, neonate N30.CNhs11133.1394-42H212.15
macrophage, bone marrow derived, pool1.CNhs11457.3560-170A119.60
macrophage, bone marrow derived, pool2.CNhs11532.3632-171A116.86
mammary gland, adult lactating day02.CNhs10480.595-22B643.28
mammary gland, adult pregnant day19.CNhs10476.588-5H234.77
medulla oblongata, adult.CNhs10477.17-12C215.73
medulla oblongata, neonate N30.CNhs11200.1396-42A315.35
mouse fibroblast cell line: CRL-1658 NIH/3T3.CNhs11093.1830-49C731.15
muscle (biceps femoris), neonate N30.CNhs11129.1389-42C219.19
neurospheres - enteric neuron derived, biol_rep1.CNhs13087.11810-124E117.98
neurospheres - enteric neuron derived, biol_rep2.CNhs13088.11811-124E213.67
neurospheres - enteric neuron derived, biol_rep3.CNhs13089.11812-124E313.79
neurospheres - parasympathetic neuron derived, biol_rep1.CNhs13084.11807-124D718.64
neurospheres - parasympathetic neuron derived, biol_rep2.CNhs13085.11808-124D815.37
neurospheres - parasympathetic neuron derived, biol_rep3.CNhs13086.11809-124D913.02
neurospheres - sympathetic neuron derived, biol_rep1.CNhs13081.11804-124D420.65
neurospheres - sympathetic neuron derived, biol_rep2.CNhs13082.11805-124D517.24
neurospheres - sympathetic neuron derived, biol_rep3.CNhs13083.11806-124D612.25
olfactory brain, adult.CNhs10489.18-22I914.78
ovary, adult.CNhs10507.91-2I720.44
ovary, embryo E18.CNhs11040.505-44H727.78
ovary, neonate N00.CNhs11217.1299-22I422.48
oviduct, adult pregnant day01.CNhs10500.988-6G618.97
pancreas, adult.CNhs10486.34-16E422.57
pancreas, embryo E14.CNhs11012.405-44F432.53
pancreas, embryo E15.CNhs11042.1556-45F230.53
pancreas, embryo E16.CNhs11003.460-26E520.18
pancreas, embryo E17.CNhs10599.1558-45G322.44
pancreas, embryo E18.CNhs10580.1535-43I717.22
pancreas, neonate N00.CNhs11105.645-26G919.64
pancreas, neonate N01.CNhs11138.1531-43D714.90
pancreas, neonate N02.CNhs11139.1539-43D819.25
pancreas, neonate N16.CNhs11136.787-43B618.33
pancreas, neonate N25.CNhs11094.1555-45E210.54
pancreas, neonate N30.CNhs11182.1548-44H519.60
pituitary gland, adult.CNhs10493.21-1G811.23
pituitary gland, embryo E12.CNhs11018.346-16E623.59
pituitary gland, embryo E13.CNhs11009.370-44C731.69
pituitary gland, embryo E14.CNhs11037.398-44A520.15
pituitary gland, embryo E15.CNhs10592.427-16B919.33
pituitary gland, embryo E16.CNhs11036.449-43F617.66
pituitary gland, embryo E17.CNhs11039.1265-44F521.23
pituitary gland, neonate N00.CNhs11190.1308-22E921.92
placenta, adult pregnant day10.CNhs10472.539-13I723.23
placenta, adult pregnant day17.CNhs10464.577-18G39.74
prostate, adult.CNhs10470.859-1F811.47
skin, adult.CNhs10492.30-1C320.94
skin, neonate N00.CNhs11124.650-25G418.08
skin, neonate N03.CNhs11215.662-22H319.90
skin, neonate N06.CNhs11097.693-20I521.01
skin, neonate N10.CNhs11108.762-6C422.98
small intestine, neonate N16.CNhs11114.790-21I114.87
spinal cord, adult.CNhs10505.24-13C918.91
spleen, adult.CNhs10465.25-2G231.61
spleen, embryo E16.CNhs11035.461-43C123.32
spleen, embryo E18.CNhs11011.1271-21F234.08
spleen, neonate N10.CNhs11116.752-24D130.52
spleen, neonate N20.CNhs11112.824-19H138.82
spleen, neonate N25.CNhs11099.1354-25G331.11
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep1.CNhs12534.12121-128C627.03
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep2.CNhs12535.12124-128C929.67
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep3.CNhs12536.12127-128D327.78
stomach, adult.CNhs10503.33-1H614.32
stomach, embryo E12.CNhs10588.356-43E332.58
stomach, embryo E15.CNhs10603.1252-16G827.04
stomach, embryo E16.CNhs11022.459-17D420.63
stomach, embryo E17.CNhs11006.1035-18D519.24
stomach, embryo E18.CNhs10999.1286-20C620.53
stomach, neonate N03.CNhs11193.1340-24B819.02
stomach, neonate N07.CNhs11210.718-18A916.78
stomach, neonate N25.CNhs11104.1355-25E413.61
stomach, neonate N30.CNhs11134.1386-42I113.87
submandibular gland, adult.CNhs10469.59-29C113.05
testis, adult.CNhs10504.57-7G564.82
testis, embryo E13.CNhs11031.389-23F527.51
testis, embryo E15.CNhs11034.443-27C530.94
testis, embryo E16.CNhs11033.470-26G528.97
testis, embryo E17.CNhs11029.486-18I524.02
testis, embryo E18.CNhs11027.503-18G520.44
testis, neonate N00.CNhs11189.1300-22B721.01
testis, neonate N07.CNhs11222.726-26I425.52
testis, neonate N10.CNhs11204.763-44D934.92
testis, neonate N20.CNhs11110.839-18H345.90
testis, neonate N30.CNhs11130.1391-42E244.36
thymus, adult.CNhs10471.38-12B523.70
thymus, embryo E14.CNhs11041.402-44I450.28
thymus, embryo E15.CNhs11005.430-45I242.32
thymus, embryo E16.CNhs11002.456-26C541.05
thymus, embryo E17.CNhs10581.478-18C139.39
thymus, embryo E18.CNhs10595.1273-19G440.33
thymus, neonate N02.CNhs11181.1541-43F837.14
thymus, neonate N03.CNhs11137.2104-43C736.77
thymus, neonate N06.CNhs11197.681-26C428.27
thymus, neonate N07.CNhs11211.713-19D334.06
thymus, neonate N10.CNhs11194.748-24E430.05
thymus, neonate N20.CNhs11186.820-7A228.36
thymus, neonate N25.CNhs11125.1362-25G724.82
thymus, neonate N30.CNhs11132.1393-42G223.96
tongue, adult.CNhs10499.32-1B416.55
trophoblast stem cell line B1 differentiation, day00, biol_rep1.CNhs13526.13297-142H342.18
trophoblast stem cell line R1AB differentiation, day00, biol_rep1.CNhs13481.13283-142F769.35
trophoblast stem cell line Rybp differentiation, day00, biol_rep1.CNhs13519.13290-142G534.08
urinary bladder, adult.CNhs10481.879-12E412.56
uterus, adult pregnant day19.CNhs10497.590-15F517.64
uterus, adult.CNhs10509.92-27E523.26
vagina, adult.CNhs10502.89-27D522.94
vesicular gland, adult.CNhs10491.51-27F812.04
visual cortex - wildtype, neonate N15, donor1.CNhs13031.10235-104A127.11
visual cortex - wildtype, neonate N15, donor2.CNhs13032.10236-104A220.71
visual cortex - wildtype, neonate N15, donor3.CNhs13033.10237-104A331.51
visual cortex - wildtype, neonate N15, donor5.CNhs13820.10349-105D720.62
visual cortex - wildtype, neonate N30, donor1.CNhs13034.10238-104A417.81
visual cortex - wildtype, neonate N30, donor2.CNhs13035.10239-104A525.68
visual cortex - wildtype, neonate N30, donor3.CNhs13036.10240-104A620.93
visual cortex - wildtype, neonate N60-70, donor1.CNhs13037.10241-104A717.11
visual cortex - wildtype, neonate N60-70, donor2.CNhs13038.10242-104A818.58
visual cortex - wildtype, neonate N60-70, donor3.CNhs13039.10243-104A913.98
whole body, embryo E11.CNhs11014.324-5I835.81
whole body, embryo E12.CNhs10587.857-27C926.73
whole body, embryo E13.CNhs10512.372-23H226.29
whole body, embryo E14.5.CNhs10578.420-27D220.91
whole body, embryo E14.CNhs10519.395-14B133.75
whole body, embryo E16.CNhs10514.453-14F218.94
whole body, embryo E17.5, pool1 (internal control).CNhs10479.3139-67G518.00
whole body, embryo E17.5, pool1 (internal control).CNhs10495.3139-67G519.78
whole body, embryo E17.5, pool1 (internal control).CNhs10511.3139-67G514.12
whole body, embryo E17.5, pool1 (internal control).CNhs10527.3139-67G518.45
whole body, embryo E17.5, pool1 (internal control).CNhs10591.3139-67G514.96
whole body, embryo E17.5, pool1 (internal control).CNhs10607.3139-67G516.41
whole body, embryo E17.5, pool1 (internal control).CNhs10623.3139-67G518.17
whole body, embryo E17.5, pool1 (internal control).CNhs10639.3139-67G516.45
whole body, embryo E17.5, pool1 (internal control).CNhs10655.3139-67G515.68
whole body, embryo E17.5, pool1 (internal control).CNhs10725.3139-67G515.72
whole body, embryo E17.5, pool1 (internal control).CNhs10749.3139-67G517.27
whole body, embryo E17.5, pool1 (internal control).CNhs10840.3139-67G514.47
whole body, embryo E17.5, pool1 (internal control).CNhs10856.3139-67G513.19
whole body, embryo E17.5, pool1 (internal control).CNhs10880.3139-67G518.11
whole body, embryo E17.5, pool1 (internal control).CNhs11000.3139-67G515.09
whole body, embryo E17.5, pool1 (internal control).CNhs11024.3139-67G518.99
whole body, embryo E17.5, pool1 (internal control).CNhs11032.3139-67G515.50
whole body, embryo E17.5, pool1 (internal control).CNhs11048.3139-67G515.99
whole body, embryo E17.5, pool1 (internal control).CNhs11072.3139-67G516.28
whole body, embryo E17.5, pool1 (internal control).CNhs11080.3139-67G514.47
whole body, embryo E17.5, pool1 (internal control).CNhs11096.3139-67G522.32
whole body, embryo E17.5, pool1 (internal control).CNhs11120.3139-67G516.57
whole body, embryo E17.5, pool1 (internal control).CNhs11128.3139-67G515.07
whole body, embryo E17.5, pool1 (internal control).CNhs11184.3139-67G517.96
whole body, embryo E17.5, pool1 (internal control).CNhs11208.3139-67G515.78
whole body, embryo E17.5, pool1 (internal control).CNhs11216.3139-67G518.03
whole body, embryo E17.5, pool1 (internal control).CNhs11246.3139-67G520.46
whole body, embryo E17.5, pool1 (internal control).CNhs11278.3139-67G514.25
whole body, embryo E17.5.CNhs10513.490-9F919.29
whole body, embryo E17.CNhs10517.475-3I525.23
whole body, embryo E18.CNhs10516.493-3B318.25
whole body, neonate N00.CNhs10525.657-19C218.69
whole body, neonate N01.CNhs10576.659-23C618.75
whole body, neonate N06.CNhs10515.692-21D116.99
whole body, neonate N10.CNhs10518.761-6B416.23





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Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data







Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process. Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process. Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.

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