FFCP PHASE1:Mm9::chr5:115879953..115880001,+: Difference between revisions
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{{FFCP | {{FFCP|EntrezGene=17690|HGNC=|MCL_coexpression_id=22|UniProt=F8WJA5|association_with_transcript=-4bp_to_ENSMUST00000067168_5end|description=CAGE_peak_3_at_Msi1_5end|id=chr5:115879953..115880001,+|ontology_enrichment_celltype=CL:0000221!1.84e-15!44;CL:0000133!1.84e-15!44;CL:0000540!4.52e-15!33;CL:0000047!4.52e-15!33;CL:0000031!4.52e-15!33;CL:0000404!4.52e-15!33;CL:0002319!5.78e-15!43;CL:0000117!1.45e-12!23;CL:0000337!1.45e-12!23;CL:0000393!2.18e-11!39;CL:0000211!2.18e-11!39;CL:0000055!3.15e-11!50;CL:0002321!8.65e-07!70;CL:0000220!8.65e-07!70|ontology_enrichment_celltype_v019_2=CL:0000221,1.39e-18,44;CL:0000133,1.39e-18,44;CL:0000540,3.43e-18,33;CL:0000047,3.43e-18,33;CL:0000031,3.43e-18,33;CL:0000404,3.43e-18,33;CL:0002319,8.10e-18,43;CL:0000117,7.60e-17,23;CL:0000337,7.60e-17,23;CL:0000393,5.11e-14,39;CL:0000211,5.11e-14,39;CL:0002321,7.85e-11,70;CL:0002609,2.74e-08,6|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0004121!3.75e-21!102;UBERON:0000924!3.75e-21!102;UBERON:0006601!3.75e-21!102;UBERON:0001017!2.91e-20!73;UBERON:0005743!2.91e-20!73;UBERON:0000073!2.97e-19!75;UBERON:0001016!2.97e-19!75;UBERON:0002346!4.88e-18!71;UBERON:0003075!4.88e-18!71;UBERON:0007284!4.88e-18!71;UBERON:0000033!1.51e-15!63;UBERON:0003056!4.88e-15!49;UBERON:0001049!2.09e-12!52;UBERON:0005068!2.09e-12!52;UBERON:0006241!2.09e-12!52;UBERON:0007135!2.09e-12!52;UBERON:0000955!2.71e-11!50;UBERON:0006238!2.71e-11!50;UBERON:0002616!3.15e-11!49;UBERON:0003080!7.09e-10!40;UBERON:0002780!2.07e-09!39;UBERON:0001890!2.07e-09!39;UBERON:0006240!2.07e-09!39;UBERON:0000153!6.23e-08!94;UBERON:0007811!8.69e-08!86;UBERON:0000468!1.26e-07!333;UBERON:0002020!3.92e-07!34;UBERON:0000970!5.97e-07!9;UBERON:0000019!5.97e-07!9;UBERON:0000047!5.97e-07!9;UBERON:0004088!5.97e-07!9;UBERON:0002104!5.97e-07!9;UBERON:0001456!5.97e-07!9;UBERON:0003072!5.97e-07!9;UBERON:0003071!5.97e-07!9;UBERON:0004128!5.97e-07!9|ontology_enrichment_uberon_v019_2=UBERON:0004121,2.76e-22,95;UBERON:0000924,2.76e-22,95;UBERON:0006601,2.76e-22,95;UBERON:0002346,1.33e-20,64;UBERON:0003075,1.33e-20,64;UBERON:0007284,1.33e-20,64;UBERON:0001017,6.18e-19,73;UBERON:0001016,4.76e-18,75;UBERON:0010371,1.75e-17,73;UBERON:0003056,1.85e-17,49;UBERON:0000073,4.26e-13,54;UBERON:0010314,7.92e-12,92;UBERON:0001049,2.64e-11,52;UBERON:0005068,2.64e-11,52;UBERON:0006241,2.64e-11,52;UBERON:0007135,2.64e-11,52;UBERON:0000970,1.75e-10,9;UBERON:0000019,1.75e-10,9;UBERON:0000047,1.75e-10,9;UBERON:0010312,1.75e-10,9;UBERON:0004088,1.75e-10,9;UBERON:0002104,1.75e-10,9;UBERON:0001456,1.75e-10,9;UBERON:0003072,1.75e-10,9;UBERON:0004128,1.75e-10,9;UBERON:0003071,1.75e-10,9;UBERON:0003080,5.53e-10,40;UBERON:0002616,1.49e-09,46;UBERON:0002780,2.49e-09,39;UBERON:0001890,2.49e-09,39;UBERON:0006240,2.49e-09,39;UBERON:0000955,3.48e-09,47;UBERON:0006238,3.48e-09,47;UBERON:0000020,7.61e-09,12;UBERON:0001032,7.61e-09,12;UBERON:0004456,7.61e-09,12;UBERON:0001444,4.27e-08,11;UBERON:0000007,4.38e-08,8;UBERON:0003296,4.38e-08,8;UBERON:0010133,4.38e-08,8;UBERON:0000033,6.14e-08,13;UBERON:0005085,6.14e-08,13;UBERON:0001894,1.73e-07,10;UBERON:0006222,1.73e-07,10|phase1_expression=0.480446541314382,0,0,0,0,0.671517087647559,0.233612640595526,0,0,0,0,0,0,0,0,0,0,0,0,0,0.510259740906419,0,0,0.47997726838022,0.22940928106717,0,0,0.430942465371778,0.190023419456374,0.252030129759931,0.221730510655305,0,0,0,2.02196133825892,1.49611180822643,1.02084678131185,0,0,0,0,0,0,0.125896817975577,0.202753862439029,0.183546752161682,0,1.74420125104357,0.439372365468944,1.1665793944457,0.979904951377538,1.43752564364972,0,0,0,0,0,0,7.48570905180512,11.1088105647127,8.23980824558033,0,0,0,0,0,1.19840044207362,3.84218305321555,6.53244557543409,6.07526722492608,7.78202357000113,0.571301968807607,1.76694832761291,7.22695715368229,9.77623804386011,6.43453150627015,1.10115880999389,1.0214987046815,1.53606533256243,8.44072241473241,10.9785172322892,9.89735404057844,1.67509799400829,0.56276261003168,0.763991238884051,1.76777151284201,2.13557521198654,5.96478226640962,0,0.151143120213571,0,0,0,0,0,0,0,0,0,0,2.11265129665021,1.28326477414318,0,0,0,0,0,0,0,0.148442139064825,0.346970653532272,1.21786191324856,0.461230994512117,0.301445281105245,0.470354828542819,0,0.247194967734374,0,0,0.161766849947409,0,0,0,0.585561594023094,0.628340120440365,0,0,0,0,2.54644086988199,0.915001205637253,8.29318723944905,0.695297280769106,0.767146371990992,1.24672826735736,0.811206315338788,0.407357455401265,0.124406970610093,0.252722758433675,2.73574412652416,4.16385417480652,2.98872735763515,5.94205028357652,3.91832526372859,7.8241974024027,4.61209393025459,4.8724896771059,4.9153640440413,2.58681591519411,2.45837904218165,0.703804496655795,0.219195732427575,0.556094498451196,0.348252166522167,0,0.59710280045548,0,0,0,0.414251545071004,0.938104239924385,0.180062061461015,0,0.393528463494808,0,0,0,0.116765342367169,0,0,0,0,0,0,0.630869845692382,5.9684675179985,0,0,1.91959425481711,1.62565670302307,0.77320476793256,0.80673409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| ||
|EntrezGene=17690 | |||
|HGNC= | |||
|MCL_coexpression_id=22 | |||
|UniProt=F8WJA5 | |||
|association_with_transcript=-4bp_to_ENSMUST00000067168_5end | |||
|description=CAGE_peak_3_at_Msi1_5end | |||
|id=chr5:115879953..115880001,+ | |||
|ontology_enrichment_celltype=CL:0000221!1.84e-15!44;CL:0000133!1.84e-15!44;CL:0000540!4.52e-15!33;CL:0000047!4.52e-15!33;CL:0000031!4.52e-15!33;CL:0000404!4.52e-15!33;CL:0002319!5.78e-15!43;CL:0000117!1.45e-12!23;CL:0000337!1.45e-12!23;CL:0000393!2.18e-11!39;CL:0000211!2.18e-11!39;CL:0000055!3.15e-11!50;CL:0002321!8.65e-07!70;CL:0000220!8.65e-07!70 | |||
|ontology_enrichment_celltype_v019_2=CL:0000221,1.39e-18,44;CL:0000133,1.39e-18,44;CL:0000540,3.43e-18,33;CL:0000047,3.43e-18,33;CL:0000031,3.43e-18,33;CL:0000404,3.43e-18,33;CL:0002319,8.10e-18,43;CL:0000117,7.60e-17,23;CL:0000337,7.60e-17,23;CL:0000393,5.11e-14,39;CL:0000211,5.11e-14,39;CL:0002321,7.85e-11,70;CL:0002609,2.74e-08,6 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0004121!3.75e-21!102;UBERON:0000924!3.75e-21!102;UBERON:0006601!3.75e-21!102;UBERON:0001017!2.91e-20!73;UBERON:0005743!2.91e-20!73;UBERON:0000073!2.97e-19!75;UBERON:0001016!2.97e-19!75;UBERON:0002346!4.88e-18!71;UBERON:0003075!4.88e-18!71;UBERON:0007284!4.88e-18!71;UBERON:0000033!1.51e-15!63;UBERON:0003056!4.88e-15!49;UBERON:0001049!2.09e-12!52;UBERON:0005068!2.09e-12!52;UBERON:0006241!2.09e-12!52;UBERON:0007135!2.09e-12!52;UBERON:0000955!2.71e-11!50;UBERON:0006238!2.71e-11!50;UBERON:0002616!3.15e-11!49;UBERON:0003080!7.09e-10!40;UBERON:0002780!2.07e-09!39;UBERON:0001890!2.07e-09!39;UBERON:0006240!2.07e-09!39;UBERON:0000153!6.23e-08!94;UBERON:0007811!8.69e-08!86;UBERON:0000468!1.26e-07!333;UBERON:0002020!3.92e-07!34;UBERON:0000970!5.97e-07!9;UBERON:0000019!5.97e-07!9;UBERON:0000047!5.97e-07!9;UBERON:0004088!5.97e-07!9;UBERON:0002104!5.97e-07!9;UBERON:0001456!5.97e-07!9;UBERON:0003072!5.97e-07!9;UBERON:0003071!5.97e-07!9;UBERON:0004128!5.97e-07!9 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0004121,2.76e-22,95;UBERON:0000924,2.76e-22,95;UBERON:0006601,2.76e-22,95;UBERON:0002346,1.33e-20,64;UBERON:0003075,1.33e-20,64;UBERON:0007284,1.33e-20,64;UBERON:0001017,6.18e-19,73;UBERON:0001016,4.76e-18,75;UBERON:0010371,1.75e-17,73;UBERON:0003056,1.85e-17,49;UBERON:0000073,4.26e-13,54;UBERON:0010314,7.92e-12,92;UBERON:0001049,2.64e-11,52;UBERON:0005068,2.64e-11,52;UBERON:0006241,2.64e-11,52;UBERON:0007135,2.64e-11,52;UBERON:0000970,1.75e-10,9;UBERON:0000019,1.75e-10,9;UBERON:0000047,1.75e-10,9;UBERON:0010312,1.75e-10,9;UBERON:0004088,1.75e-10,9;UBERON:0002104,1.75e-10,9;UBERON:0001456,1.75e-10,9;UBERON:0003072,1.75e-10,9;UBERON:0004128,1.75e-10,9;UBERON:0003071,1.75e-10,9;UBERON:0003080,5.53e-10,40;UBERON:0002616,1.49e-09,46;UBERON:0002780,2.49e-09,39;UBERON:0001890,2.49e-09,39;UBERON:0006240,2.49e-09,39;UBERON:0000955,3.48e-09,47;UBERON:0006238,3.48e-09,47;UBERON:0000020,7.61e-09,12;UBERON:0001032,7.61e-09,12;UBERON:0004456,7.61e-09,12;UBERON:0001444,4.27e-08,11;UBERON:0000007,4.38e-08,8;UBERON:0003296,4.38e-08,8;UBERON:0010133,4.38e-08,8;UBERON:0000033,6.14e-08,13;UBERON:0005085,6.14e-08,13;UBERON:0001894,1.73e-07,10;UBERON:0006222,1.73e-07,10 | |||
|phase1_expression=0.480446541314382,0,0,0,0,0.671517087647559,0.233612640595526,0,0,0,0,0,0,0,0,0,0,0,0,0,0.510259740906419,0,0,0.47997726838022,0.22940928106717,0,0,0.430942465371778,0.190023419456374,0.252030129759931,0.221730510655305,0,0,0,2.02196133825892,1.49611180822643,1.02084678131185,0,0,0,0,0,0,0.125896817975577,0.202753862439029,0.183546752161682,0,1.74420125104357,0.439372365468944,1.1665793944457,0.979904951377538,1.43752564364972,0,0,0,0,0,0,7.48570905180512,11.1088105647127,8.23980824558033,0,0,0,0,0,1.19840044207362,3.84218305321555,6.53244557543409,6.07526722492608,7.78202357000113,0.571301968807607,1.76694832761291,7.22695715368229,9.77623804386011,6.43453150627015,1.10115880999389,1.0214987046815,1.53606533256243,8.44072241473241,10.9785172322892,9.89735404057844,1.67509799400829,0.56276261003168,0.763991238884051,1.76777151284201,2.13557521198654,5.96478226640962,0,0.151143120213571,0,0,0,0,0,0,0,0,0,0,2.11265129665021,1.28326477414318,0,0,0,0,0,0,0,0.148442139064825,0.346970653532272,1.21786191324856,0.461230994512117,0.301445281105245,0.470354828542819,0,0.247194967734374,0,0,0.161766849947409,0,0,0,0.585561594023094,0.628340120440365,0,0,0,0,2.54644086988199,0.915001205637253,8.29318723944905,0.695297280769106,0.767146371990992,1.24672826735736,0.811206315338788,0.407357455401265,0.124406970610093,0.252722758433675,2.73574412652416,4.16385417480652,2.98872735763515,5.94205028357652,3.91832526372859,7.8241974024027,4.61209393025459,4.8724896771059,4.9153640440413,2.58681591519411,2.45837904218165,0.703804496655795,0.219195732427575,0.556094498451196,0.348252166522167,0,0.59710280045548,0,0,0,0.414251545071004,0.938104239924385,0.180062061461015,0,0.393528463494808,0,0,0,0.116765342367169,0,0,0,0,0,0,0.630869845692382,5.9684675179985,0,0,1.91959425481711,1.62565670302307,0.77320476793256,0.80673409849337,1.55664630691409,0.380451252225118,0,0.329397909448022,0.502670417600539,0.795825888164603,0.58489226135736,0,0.432276099749388,0.199141273254367,1.51734320762465,0.685491075658373,3.38123207019241,0.814605311381257,0.969762435838129,0.841629838683823,0.189709611372772,0,0,0,0,0,0.589676985339609,0.224862112384854,0,0,0,0,0,0,0,0,0,0,0,0,0,0.757965647081939,0.977789858652155,0.339490171550376,0.234690248288502,0,0,0,0,0.221464689648775,0,0,0,0,0,0,0,0,0.80275294993896,2.10981035865966,0,0,1.57754109708128,1.17131623288992,2.15423397732799,1.43381278771531,1.11399337041197,0.849229592366497,1.21443210502468,0.876767573733936,1.18586333383957,0.642642632843614,0.425820255624806,0.890328018336276,0.651547837414304,0.164970122972535,0,0.485561272309963,0.604647113929502,0,0,0,0,0,0,0,0,0,2.38307724027652,2.34079422240703,3.88076051348264,2.7863814554107,4.61084607469911,2.67553226403106,1.15184314421485,3.95804433848979,0.23467170806371,0.21183207086382,0,0,0.322928853391811,0.180938774784468,0.477489376012546,0.656563598980245,0.291480836629851,0.927126510052548,0,0,0,0,0,0,0.169978429993855,0,0,0,1.89801596148681,0.813277868507395,0.648032044930808,0.836353184057875,0.218362563746178,0.539457385539283,0.165306911450672,0,0,0,0.56369293868419,0.448549638131936,0.66183396182839,0.388902376688095,0.258319646955462,0.844780627453891,0.938857909166032,1.0416350787516,2.83120229949419,2.65742532908607,2.01621004380506,0,0.405450430580328,0.102710957164827,0,0.358053391334963,0,0.120195449519969,0,0,0.0762068066549998,0.100826185136841,0.194915761479505,0.0962118416403295,0,0,0,0,0,0,0.187682475451182,0.183151624267265,0,0,0,0.460325236507177,0,0.343706364687375,0,0.755393897389701,0,0.900642406448441,0.453142408984205,0,4.35906859853542,2.79317411380722,3.24393850932855,1.21553358534147,1.67690530102386,1.10306105070008,1.33348036680969,0.824140228955577,0.962757628775446,0.505394423527595,1.01391719956096,0.754505365544305,0.842773567228942,1.28050304809739,0.804096565378586,0.952587382566147,0.927074607558844,0.964546102318525,0.824171801606613,1.32479028120958,1.71434626192708,1.06485483695602,1.1921809497366,1.30811774969096,0.941093804153306,0.423073039458382,0.73171189149109,1.05227884575137,0.543216455383447,0.561142271657738,0.949080144993393,1.57607171800902,0.409231043169689,1.08455788830176,0.964533054905707,3.74715866906919,1.16965804222704,1.07435527024149,0.57386499620653,0,0.463735671240843 | |||
|short_description=p3@Msi1 | |||
}} |
Revision as of 06:06, 14 September 2013
Short description: | p3@Msi1 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_3_at_Msi1_5end |
Coexpression cluster: | MCL_coexpression_mm9:22 |
Association with transcript: | -4bp_to_ENSMUST00000067168_5end |
EntrezGene: | Msi1 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
ectodermal cell | 1.39e-18 | 44 |
neurectodermal cell | 1.39e-18 | 44 |
neuron | 3.43e-18 | 33 |
neuronal stem cell | 3.43e-18 | 33 |
neuroblast | 3.43e-18 | 33 |
electrically signaling cell | 3.43e-18 | 33 |
neural cell | 8.10e-18 | 43 |
CNS neuron (sensu Vertebrata) | 7.60e-17 | 23 |
neuroblast (sensu Vertebrata) | 7.60e-17 | 23 |
electrically responsive cell | 5.11e-14 | 39 |
electrically active cell | 5.11e-14 | 39 |
embryonic cell | 7.85e-11 | 70 |
neuron of cerebral cortex | 2.74e-08 | 6 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.