FFCP PHASE1:Mm9::chr5:115905342..115905374,+: Difference between revisions
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{{FFCP | {{FFCP|EntrezGene=NA|HGNC=|MCL_coexpression_id=573|UniProt=NA|association_with_transcript=NA|description=CAGE_peak_at_chr5:115905342..115905374,+|id=chr5:115905342..115905374,+|ontology_enrichment_celltype=CL:0000221!1.67e-14!44;CL:0000133!1.67e-14!44;CL:0002319!6.61e-14!43;CL:0000540!4.03e-12!33;CL:0000047!4.03e-12!33;CL:0000031!4.03e-12!33;CL:0000404!4.03e-12!33;CL:0000117!7.62e-12!23;CL:0000337!7.62e-12!23;CL:0000055!1.46e-10!50;CL:0000393!2.22e-09!39;CL:0000211!2.22e-09!39|ontology_enrichment_celltype_v019_2=CL:0000221,1.79e-15,44;CL:0000133,1.79e-15,44;CL:0002319,8.08e-15,43;CL:0000540,3.31e-13,33;CL:0000047,3.31e-13,33;CL:0000031,3.31e-13,33;CL:0000404,3.31e-13,33;CL:0000117,6.67e-13,23;CL:0000337,6.67e-13,23;CL:0000393,7.73e-10,39;CL:0000211,7.73e-10,39;CL:0002321,1.78e-07,70|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0004121!7.06e-22!102;UBERON:0000924!7.06e-22!102;UBERON:0006601!7.06e-22!102;UBERON:0002346!2.24e-21!71;UBERON:0003075!2.24e-21!71;UBERON:0007284!2.24e-21!71;UBERON:0001017!9.31e-21!73;UBERON:0005743!9.31e-21!73;UBERON:0000073!9.64e-20!75;UBERON:0001016!9.64e-20!75;UBERON:0000033!4.52e-18!63;UBERON:0003056!5.81e-17!49;UBERON:0001049!2.78e-15!52;UBERON:0005068!2.78e-15!52;UBERON:0006241!2.78e-15!52;UBERON:0007135!2.78e-15!52;UBERON:0000955!1.65e-13!50;UBERON:0006238!1.65e-13!50;UBERON:0002616!3.27e-13!49;UBERON:0003080!1.07e-11!40;UBERON:0002780!1.23e-11!39;UBERON:0001890!1.23e-11!39;UBERON:0006240!1.23e-11!39;UBERON:0002020!1.74e-09!34;UBERON:0000153!2.06e-09!94;UBERON:0007811!6.41e-09!86;UBERON:0002791!2.01e-07!29;UBERON:0003528!2.01e-07!29;UBERON:0001893!2.01e-07!29;UBERON:0000468!5.58e-07!333;UBERON:0000970!9.74e-07!9;UBERON:0000019!9.74e-07!9;UBERON:0000047!9.74e-07!9;UBERON:0004088!9.74e-07!9;UBERON:0002104!9.74e-07!9;UBERON:0001456!9.74e-07!9;UBERON:0003072!9.74e-07!9;UBERON:0003071!9.74e-07!9;UBERON:0004128!9.74e-07!9|ontology_enrichment_uberon_v019_2=UBERON:0004121,6.22e-23,95;UBERON:0000924,6.22e-23,95;UBERON:0006601,6.22e-23,95;UBERON:0002346,1.47e-22,64;UBERON:0003075,1.47e-22,64;UBERON:0007284,1.47e-22,64;UBERON:0001017,5.64e-22,73;UBERON:0010371,6.65e-21,73;UBERON:0001016,1.52e-20,75;UBERON:0003056,9.54e-18,49;UBERON:0000073,3.41e-16,54;UBERON:0001049,5.87e-16,52;UBERON:0005068,5.87e-16,52;UBERON:0006241,5.87e-16,52;UBERON:0007135,5.87e-16,52;UBERON:0010314,2.81e-14,92;UBERON:0000955,1.43e-13,47;UBERON:0006238,1.43e-13,47;UBERON:0002616,3.00e-13,46;UBERON:0003080,4.94e-12,40;UBERON:0002780,5.87e-12,39;UBERON:0001890,5.87e-12,39;UBERON:0006240,5.87e-12,39;UBERON:0002020,1.26e-09,34;UBERON:0003528,2.10e-07,29;UBERON:0002791,2.10e-07,29;UBERON:0001893,2.10e-07,29;UBERON:0000970,2.83e-07,9;UBERON:0000019,2.83e-07,9;UBERON:0000047,2.83e-07,9;UBERON:0010312,2.83e-07,9;UBERON:0004088,2.83e-07,9;UBERON:0002104,2.83e-07,9;UBERON:0001456,2.83e-07,9;UBERON:0003072,2.83e-07,9;UBERON:0004128,2.83e-07,9;UBERON:0003071,2.83e-07,9;UBERON:0000020,3.36e-07,12;UBERON:0001032,3.36e-07,12;UBERON:0004456,3.36e-07,12;UBERON:0000922,9.41e-07,320|phase1_expression=10.890121603126,0,1.36499771816861,0,0,1.51091344720701,1.40167584357315,0,0,0,0,0.0797721589953364,0,0.0874204024189974,0,0,0,0,0,0,3.06155844543851,0.0992909512008853,0,1.59992422793407,2.98232065387321,0.57423196411502,1.29228598847722,0.861884930743556,1.52018735565099,1.00812051903972,4.6563407237614,0,0,0,9.53210345179206,6.81562045969819,7.14592746918292,0,0,0,0,0,0,0.377690453926732,1.31790010585369,0.917733760808408,3.12956537739216,8.72100625521786,16.9158360705543,4.27745777963423,1.39986421625363,12.9377307928474,0,0,0,0.257259436035947,1.14613375975503,0,25.2895576074497,37.5583595283143,17.747279298173,2.37191172448392,0.889294796111139,0,0.988866362566974,0.7104801149461,29.6604109413221,59.1696190195194,36.7061227572011,54.2723872093396,53.2122152218996,5.42736870367227,7.73039893330647,33.6849697841124,21.3735400370667,22.0612508786405,1.10115880999389,5.10749352340751,4.45458946443106,25.3221672441972,13.9976094711687,30.7338888628488,5.862842979029,6.19038871034848,6.26472815884921,12.0797720044204,12.9558229527184,21.063137378259,0.227178579999552,0.68014404096107,0.579728977403356,0,0,0,0,0,0.421333260395256,0.340860645156116,0.779358013808606,1.06001872353102,27.0419365971227,1.28326477414318,0,0,1.29894624606728,0.253359865475099,0,0.45673551887624,0,0.445326417194474,5.55153045651635,2.43572382649713,4.38169444786511,2.11011696773672,1.88141931417128,0.879666139307728,0,0.289198713839823,0,1.45590164952668,0.662524555381181,2.90925151881133,0,2.63502717310392,4.60782754989601,0.255457055208591,0,0,0,2.24685959107234,0,14.4502504929794,2.25971616249959,3.3243009452943,3.32460871295296,2.75810147215188,2.24046600470696,1.11966273549084,0,5.89237196482127,31.2289063110489,17.2426578325105,17.2859644613135,35.8677466449002,40.7538629916454,63.0319503801461,85.7370779721519,27.4225572983357,6.25147179505242,2.08016688184601,2.63926686245923,3.5071317188412,4.448755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| ||
|EntrezGene=NA | |||
|HGNC= | |||
|MCL_coexpression_id=573 | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|description=CAGE_peak_at_chr5:115905342..115905374,+ | |||
|id=chr5:115905342..115905374,+ | |||
|ontology_enrichment_celltype=CL:0000221!1.67e-14!44;CL:0000133!1.67e-14!44;CL:0002319!6.61e-14!43;CL:0000540!4.03e-12!33;CL:0000047!4.03e-12!33;CL:0000031!4.03e-12!33;CL:0000404!4.03e-12!33;CL:0000117!7.62e-12!23;CL:0000337!7.62e-12!23;CL:0000055!1.46e-10!50;CL:0000393!2.22e-09!39;CL:0000211!2.22e-09!39 | |||
|ontology_enrichment_celltype_v019_2=CL:0000221,1.79e-15,44;CL:0000133,1.79e-15,44;CL:0002319,8.08e-15,43;CL:0000540,3.31e-13,33;CL:0000047,3.31e-13,33;CL:0000031,3.31e-13,33;CL:0000404,3.31e-13,33;CL:0000117,6.67e-13,23;CL:0000337,6.67e-13,23;CL:0000393,7.73e-10,39;CL:0000211,7.73e-10,39;CL:0002321,1.78e-07,70 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0004121!7.06e-22!102;UBERON:0000924!7.06e-22!102;UBERON:0006601!7.06e-22!102;UBERON:0002346!2.24e-21!71;UBERON:0003075!2.24e-21!71;UBERON:0007284!2.24e-21!71;UBERON:0001017!9.31e-21!73;UBERON:0005743!9.31e-21!73;UBERON:0000073!9.64e-20!75;UBERON:0001016!9.64e-20!75;UBERON:0000033!4.52e-18!63;UBERON:0003056!5.81e-17!49;UBERON:0001049!2.78e-15!52;UBERON:0005068!2.78e-15!52;UBERON:0006241!2.78e-15!52;UBERON:0007135!2.78e-15!52;UBERON:0000955!1.65e-13!50;UBERON:0006238!1.65e-13!50;UBERON:0002616!3.27e-13!49;UBERON:0003080!1.07e-11!40;UBERON:0002780!1.23e-11!39;UBERON:0001890!1.23e-11!39;UBERON:0006240!1.23e-11!39;UBERON:0002020!1.74e-09!34;UBERON:0000153!2.06e-09!94;UBERON:0007811!6.41e-09!86;UBERON:0002791!2.01e-07!29;UBERON:0003528!2.01e-07!29;UBERON:0001893!2.01e-07!29;UBERON:0000468!5.58e-07!333;UBERON:0000970!9.74e-07!9;UBERON:0000019!9.74e-07!9;UBERON:0000047!9.74e-07!9;UBERON:0004088!9.74e-07!9;UBERON:0002104!9.74e-07!9;UBERON:0001456!9.74e-07!9;UBERON:0003072!9.74e-07!9;UBERON:0003071!9.74e-07!9;UBERON:0004128!9.74e-07!9 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0004121,6.22e-23,95;UBERON:0000924,6.22e-23,95;UBERON:0006601,6.22e-23,95;UBERON:0002346,1.47e-22,64;UBERON:0003075,1.47e-22,64;UBERON:0007284,1.47e-22,64;UBERON:0001017,5.64e-22,73;UBERON:0010371,6.65e-21,73;UBERON:0001016,1.52e-20,75;UBERON:0003056,9.54e-18,49;UBERON:0000073,3.41e-16,54;UBERON:0001049,5.87e-16,52;UBERON:0005068,5.87e-16,52;UBERON:0006241,5.87e-16,52;UBERON:0007135,5.87e-16,52;UBERON:0010314,2.81e-14,92;UBERON:0000955,1.43e-13,47;UBERON:0006238,1.43e-13,47;UBERON:0002616,3.00e-13,46;UBERON:0003080,4.94e-12,40;UBERON:0002780,5.87e-12,39;UBERON:0001890,5.87e-12,39;UBERON:0006240,5.87e-12,39;UBERON:0002020,1.26e-09,34;UBERON:0003528,2.10e-07,29;UBERON:0002791,2.10e-07,29;UBERON:0001893,2.10e-07,29;UBERON:0000970,2.83e-07,9;UBERON:0000019,2.83e-07,9;UBERON:0000047,2.83e-07,9;UBERON:0010312,2.83e-07,9;UBERON:0004088,2.83e-07,9;UBERON:0002104,2.83e-07,9;UBERON:0001456,2.83e-07,9;UBERON:0003072,2.83e-07,9;UBERON:0004128,2.83e-07,9;UBERON:0003071,2.83e-07,9;UBERON:0000020,3.36e-07,12;UBERON:0001032,3.36e-07,12;UBERON:0004456,3.36e-07,12;UBERON:0000922,9.41e-07,320 | |||
|phase1_expression=10.890121603126,0,1.36499771816861,0,0,1.51091344720701,1.40167584357315,0,0,0,0,0.0797721589953364,0,0.0874204024189974,0,0,0,0,0,0,3.06155844543851,0.0992909512008853,0,1.59992422793407,2.98232065387321,0.57423196411502,1.29228598847722,0.861884930743556,1.52018735565099,1.00812051903972,4.6563407237614,0,0,0,9.53210345179206,6.81562045969819,7.14592746918292,0,0,0,0,0,0,0.377690453926732,1.31790010585369,0.917733760808408,3.12956537739216,8.72100625521786,16.9158360705543,4.27745777963423,1.39986421625363,12.9377307928474,0,0,0,0.257259436035947,1.14613375975503,0,25.2895576074497,37.5583595283143,17.747279298173,2.37191172448392,0.889294796111139,0,0.988866362566974,0.7104801149461,29.6604109413221,59.1696190195194,36.7061227572011,54.2723872093396,53.2122152218996,5.42736870367227,7.73039893330647,33.6849697841124,21.3735400370667,22.0612508786405,1.10115880999389,5.10749352340751,4.45458946443106,25.3221672441972,13.9976094711687,30.7338888628488,5.862842979029,6.19038871034848,6.26472815884921,12.0797720044204,12.9558229527184,21.063137378259,0.227178579999552,0.68014404096107,0.579728977403356,0,0,0,0,0,0.421333260395256,0.340860645156116,0.779358013808606,1.06001872353102,27.0419365971227,1.28326477414318,0,0,1.29894624606728,0.253359865475099,0,0.45673551887624,0,0.445326417194474,5.55153045651635,2.43572382649713,4.38169444786511,2.11011696773672,1.88141931417128,0.879666139307728,0,0.289198713839823,0,1.45590164952668,0.662524555381181,2.90925151881133,0,2.63502717310392,4.60782754989601,0.255457055208591,0,0,0,2.24685959107234,0,14.4502504929794,2.25971616249959,3.3243009452943,3.32460871295296,2.75810147215188,2.24046600470696,1.11966273549084,0,5.89237196482127,31.2289063110489,17.2426578325105,17.2859644613135,35.8677466449002,40.7538629916454,63.0319503801461,85.7370779721519,27.4225572983357,6.25147179505242,2.08016688184601,2.63926686245923,3.5071317188412,4.44875598760957,0.696504333044333,2.05782136407943,9.15557627365069,0,0,0,1.03562886267751,3.51789089971644,2.16074473753218,0.23674473558521,0.393528463494808,0.771335564436891,0.930135779001631,0.268273401399619,0,0.493679549740441,0.656669856316381,0.243206428637567,0.292399974850665,0.219550115291051,0.268412837520744,1.47202963994889,11.3195073617213,0,0,7.46508876873319,6.0381534683714,1.03093969057675,1.61346819698674,2.2237804384487,0.760902504450237,2.84717436926707,3.29397909448022,2.5133520880027,1.1937388322469,1.16978452271472,0.898819408654221,1.72910439899755,1.59313018603494,2.0863469104839,7.65465034485183,3.38123207019241,4.2766778847516,3.68509725618489,2.45475369616115,1.70738650235495,0.295220295959204,0.156998727841375,0.370191491765402,0,0.333690211432188,0.786235980452812,0,0.202860121388503,0.241177159752417,0.50925170356284,0.287696137450811,0,1.37280706594041,1.43768206527355,0.372140947668503,0.312037673114561,0,0.179397413521912,0,0,1.70542270593436,1.79261474086228,5.09235257325564,3.28566347603903,0.167506257441816,0.476087281772027,0.780534591431195,0.630540576424764,1.32878813789265,0.797273843287435,0.163863314715738,0,0.144649058581512,0,0,0,0,1.12385412991454,4.33683240391152,0.983609672260053,0,2.83957397474631,3.12350995437311,2.58508077279359,1.91175038362042,2.00518806674155,1.13230612315533,1.61924280669958,2.63030272120181,2.37172666767914,4.4984984299053,0.283880170416537,7.83488656135923,2.76907830901079,0.659880491890142,0,4.85561272309963,8.46505959501303,1.50884063804718,0.885905678642318,0.307435147943927,0.516856586336442,1.45413491791002,1.06949213515416,0.316036757935816,0,0,8.85142974959849,21.2472090956946,24.9662259700716,31.2932071146125,6.91626911204867,18.9070946658195,12.9993726275676,20.3991515906782,0,0,0,0.65954501176592,0.807322133479528,1.02531972377865,3.46179797609096,2.29797259643086,1.7488850197791,3.15223013417866,0,0.82554747185289,0.925972636848558,0,0,0,0,0.139951452323658,0,2.86401185404534,4.9032079005076,1.42323626988794,3.78018692876304,2.92723614420256,2.40198820120795,1.61837215661785,1.1571483801547,0.523511883968059,0.388844919875379,0,14.0923234671048,8.22341003241883,7.1147150896552,12.444876054019,10.2036260547408,11.6579726588637,6.80671984145373,16.0151393358059,12.1636839533825,18.3603931827765,18.4339204005034,0,4.86540516696394,2.67048488628551,1.94881234466693,0.179026695667481,0.39736270956253,0.721172697119813,0.443068581523732,0.302899349844443,0.15241361331,0.604957110821043,0.38983152295901,0.192423683280659,0.350630706544707,0,0.665957860122194,0.807424709485281,0.167884616364078,0,0,0.549454872801795,0.643105137237198,0.501572104035363,0.564751842617067,0.920650473014354,2.29158205375759,9.10821866421544,0.685082519770642,1.5107877947794,4.72515750162264,1.80128481289688,1.35942722695261,3.62432218226274,35.7028475689568,1.19707462020309,4.78054096111576,4.132814190161,3.14419743941973,2.38996560985018,0.44449345560323,0.824140228955577,0.64183841918363,1.01078884705519,1.01391719956096,1.50901073108861,1.77918864192777,1.7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| |||
|short_description=p@chr5:115905342..115905374,+ | |||
}} |
Revision as of 06:07, 14 September 2013
Short description: | p@chr5:115905342..115905374, + |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr5:115905342..115905374, + |
Coexpression cluster: | MCL_coexpression_mm9:573 |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
ectodermal cell | 1.79e-15 | 44 |
neurectodermal cell | 1.79e-15 | 44 |
neural cell | 8.08e-15 | 43 |
neuron | 3.31e-13 | 33 |
neuronal stem cell | 3.31e-13 | 33 |
neuroblast | 3.31e-13 | 33 |
electrically signaling cell | 3.31e-13 | 33 |
CNS neuron (sensu Vertebrata) | 6.67e-13 | 23 |
neuroblast (sensu Vertebrata) | 6.67e-13 | 23 |
electrically responsive cell | 7.73e-10 | 39 |
electrically active cell | 7.73e-10 | 39 |
embryonic cell | 1.78e-07 | 70 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.