FFCP PHASE1:Mm9::chr5:136704291..136704298,+: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP|EntrezGene=NA|HGNC=|MCL_coexpression_id=124|UniProt=NA|association_with_transcript=NA|description=CAGE_peak_at_chr5:136704291..136704298,+|id=chr5:136704291..136704298,+|ontology_enrichment_celltype=CL:0000553!4.31e-10!6;CL:0000556!4.31e-10!6;CL:0000050!1.65e-08!9|ontology_enrichment_celltype_v019_2=CL:0000553,5.19e-34,6;CL:0000556,5.19e-34,6;CL:0000050,6.67e-23,9;CL:0002027,5.00e-18,3;CL:0002006,5.00e-18,3;CL:0002024,5.00e-18,3;CL:0000839,4.85e-16,13;CL:0000763,3.91e-13,16;CL:0000049,3.87e-11,19;CL:0002031,1.43e-08,25;CL:0000988,8.81e-07,32;CL:0002032,8.81e-07,32;CL:0000037,8.81e-07,32;CL:0000837,8.81e-07,32|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0002106!2.68e-08!6;UBERON:0004457!2.68e-08!6;UBERON:0000042!2.68e-08!6;UBERON:0004854!2.68e-08!6;UBERON:0009034!2.68e-08!6;UBERON:0002095!2.68e-08!6;UBERON:0004782!2.68e-08!6;UBERON:0003281!2.68e-08!6;UBERON:0009664!2.68e-08!6;UBERON:0002296!2.68e-08!6;UBERON:0005602!2.68e-08!6;UBERON:0001179!2.68e-08!6;UBERON:0006293!2.68e-08!6|ontology_enrichment_uberon_v019_2=UBERON:0002371,3.91e-13,16;UBERON:0001474,1.11e-09,22;UBERON:0004765,1.11e-09,22;UBERON:0001434,1.11e-09,22;UBERON:0002204,8.81e-07,32|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0.171200729931206,0,0.333109761815663,6.07425802169478,5.59649502502517,1.10411757875383,0.822686601634433,1.27316895539409,0,0,0,0,0,0,0,0,0,0,0,0.635030673459631,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.103689612308478,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.117588707135705,0.125666591329675,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.248813941220186,0,0,0,0,0,0.150704817835715,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.154267112887378,0,0,0,0,0,0,0.292399974850665,0.439100230582101,0.268412837520744,0,0,0,0,0,0,0.128867461322093,0,0,0,0,0,0,0.198956472041151,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.166845105716094,0.589676985339609,1.12431056192427,1.01430060694251,0.482354319504834,0.763877555344259,0.575392274901621,0.162135226775035,0,0,0,0,0,0,0,0.184753190166605,0.189491411770485,0,0,0,0.167506257441816,0,0.195133647857799,0,0.44292937929755,0,0.983179888294428,0.172684981865896,0.289298117163023,0,0,0,0,0,0.117211686592203,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.242780636154981,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.178368817602071,0,0,0,0.21183207086382,0,0,0,0,0,0,0,0.18542530201051,0.512612642393558,0.412773735926445,0.185194527369712,0.753473828018764,0.27338845544205,0.228778173206523,0,0,0,0,0,0,0,0.209088296014469,0,0,0,0,0,0,0,0,0,0.194451188344048,0,0,0,0,0,0,0,0,0,0.205421914329655,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.729320151204882,0,0,0,0.206035057238894,0,0.252697211763798,0,0,0.0936415074698824,0.0640251524048693,0.0574354689556133,0.476293691283074,0,0,0.412085900803307,0.147198920134397,1.02860775715625,0,0.238436189947321,0,0,0.0846146078916765,0,0.526139422875686,0.271608227691724,0,0,0.0985044823755635,0.818462086339379,0.464810523557898,0.192906610981141,0.499621155875892,0.233931608445408,0,0,0,0.231867835620421|short_description=p@chr5:136704291..136704298,+}} | ||
|EntrezGene=NA | |||
|HGNC= | |||
|MCL_coexpression_id=124 | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|description=CAGE_peak_at_chr5:136704291..136704298,+ | |||
|id=chr5:136704291..136704298,+ | |||
|ontology_enrichment_celltype=CL:0000553!4.31e-10!6;CL:0000556!4.31e-10!6;CL:0000050!1.65e-08!9 | |||
|ontology_enrichment_celltype_v019_2=CL:0000553,5.19e-34,6;CL:0000556,5.19e-34,6;CL:0000050,6.67e-23,9;CL:0002027,5.00e-18,3;CL:0002006,5.00e-18,3;CL:0002024,5.00e-18,3;CL:0000839,4.85e-16,13;CL:0000763,3.91e-13,16;CL:0000049,3.87e-11,19;CL:0002031,1.43e-08,25;CL:0000988,8.81e-07,32;CL:0002032,8.81e-07,32;CL:0000037,8.81e-07,32;CL:0000837,8.81e-07,32 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002106!2.68e-08!6;UBERON:0004457!2.68e-08!6;UBERON:0000042!2.68e-08!6;UBERON:0004854!2.68e-08!6;UBERON:0009034!2.68e-08!6;UBERON:0002095!2.68e-08!6;UBERON:0004782!2.68e-08!6;UBERON:0003281!2.68e-08!6;UBERON:0009664!2.68e-08!6;UBERON:0002296!2.68e-08!6;UBERON:0005602!2.68e-08!6;UBERON:0001179!2.68e-08!6;UBERON:0006293!2.68e-08!6 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002371,3.91e-13,16;UBERON:0001474,1.11e-09,22;UBERON:0004765,1.11e-09,22;UBERON:0001434,1.11e-09,22;UBERON:0002204,8.81e-07,32 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0.171200729931206,0,0.333109761815663,6.07425802169478,5.59649502502517,1.10411757875383,0.822686601634433,1.27316895539409,0,0,0,0,0,0,0,0,0,0,0,0.635030673459631,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.103689612308478,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.117588707135705,0.125666591329675,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.248813941220186,0,0,0,0,0,0.150704817835715,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.154267112887378,0,0,0,0,0,0,0.292399974850665,0.439100230582101,0.268412837520744,0,0,0,0,0,0,0.128867461322093,0,0,0,0,0,0,0.198956472041151,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.166845105716094,0.589676985339609,1.12431056192427,1.01430060694251,0.482354319504834,0.763877555344259,0.575392274901621,0.162135226775035,0,0,0,0,0,0,0,0.184753190166605,0.189491411770485,0,0,0,0.167506257441816,0,0.195133647857799,0,0.44292937929755,0,0.983179888294428,0.172684981865896,0.289298117163023,0,0,0,0,0,0.117211686592203,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.242780636154981,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.178368817602071,0,0,0,0.21183207086382,0,0,0,0,0,0,0,0.18542530201051,0.512612642393558,0.412773735926445,0.185194527369712,0.753473828018764,0.27338845544205,0.228778173206523,0,0,0,0,0,0,0,0.209088296014469,0,0,0,0,0,0,0,0,0,0.194451188344048,0,0,0,0,0,0,0,0,0,0.205421914329655,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.729320151204882,0,0,0,0.206035057238894,0,0.252697211763798,0,0,0.0936415074698824,0.0640251524048693,0.0574354689556133,0.476293691283074,0,0,0.412085900803307,0.147198920134397,1.02860775715625,0,0.238436189947321,0,0,0.0846146078916765,0,0.526139422875686,0.271608227691724,0,0,0.0985044823755635,0.818462086339379,0.464810523557898,0.192906610981141,0.499621155875892,0.233931608445408,0,0,0,0.231867835620421 | |||
|short_description=p@chr5:136704291..136704298,+ | |||
}} |
Revision as of 06:42, 14 September 2013
Short description: | p@chr5:136704291..136704298, + |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr5:136704291..136704298, + |
Coexpression cluster: | MCL_coexpression_mm9:124 |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
megakaryocyte progenitor cell | 5.19e-34 | 6 |
megakaryocyte | 5.19e-34 | 6 |
megakaryocyte-erythroid progenitor cell | 6.67e-23 | 9 |
CD9-positive, CD41-positive megakaryocyte cell | 5.00e-18 | 3 |
Kit-positive, CD34-negative megakaryocyte erythroid progenitor cell | 5.00e-18 | 3 |
Kit-positive megakaryocyte progenitor cell | 5.00e-18 | 3 |
myeloid lineage restricted progenitor cell | 4.85e-16 | 13 |
myeloid cell | 3.91e-13 | 16 |
common myeloid progenitor | 3.87e-11 | 19 |
hematopoietic lineage restricted progenitor cell | 1.43e-08 | 25 |
hematopoietic cell | 8.81e-07 | 32 |
hematopoietic oligopotent progenitor cell | 8.81e-07 | 32 |
hematopoietic stem cell | 8.81e-07 | 32 |
hematopoietic multipotent progenitor cell | 8.81e-07 | 32 |
Ontology term | p-value | n |
---|---|---|
bone marrow | 3.91e-13 | 16 |
bone element | 1.11e-09 | 22 |
skeletal element | 1.11e-09 | 22 |
skeletal system | 1.11e-09 | 22 |
musculoskeletal system | 8.81e-07 | 32 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.