FFCP PHASE1:Mm9::chr5:28536954..28536968,-: Difference between revisions
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{{FFCP | {{FFCP|EntrezGene=269637|HGNC=|MCL_coexpression_id=30|UniProt=|association_with_transcript=-51bp_to_ENSMUST00000141196_5end|description=CAGE_peak_4_at_Cnpy1_5end|id=chr5:28536954..28536968,-|ontology_enrichment_celltype=CL:0000120!8.12e-11!3|ontology_enrichment_celltype_v019_2=CL:0002614,1.88e-08,3|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0004733!8.07e-12!6;UBERON:0004732!8.07e-12!6;UBERON:0002028!8.07e-12!6;UBERON:0007277!8.07e-12!6;UBERON:0002037!1.14e-08!4;UBERON:0002680!1.14e-08!4;UBERON:0001895!1.14e-08!4;UBERON:0010092!1.14e-08!4;UBERON:0006215!1.14e-08!4|ontology_enrichment_uberon_v019_2=UBERON:0002037,6.55e-23,4;UBERON:0002680,6.55e-23,4;UBERON:0001895,6.55e-23,4;UBERON:0010092,6.55e-23,4;UBERON:0006215,6.55e-23,4;UBERON:0004733,1.13e-15,6;UBERON:0004732,1.13e-15,6;UBERON:0002028,1.13e-15,6;UBERON:0007277,1.13e-15,6;UBERON:0002038,1.88e-08,3;UBERON:0009663,1.88e-08,3;UBERON:0009661,1.88e-08,3;UBERON:0000125,1.88e-08,3;UBERON:0002308,1.88e-08,3;UBERON:0003076,2.25e-08,12;UBERON:0003057,2.25e-08,12|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.7008658030214,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.404632921719196,0.528990979272033,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.67509799400829,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,24.8863677459815,24.5052646971742,0,0,0,0,0,0,0,0,0,0,0,0.203678727700633,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.117211686592203,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.45032120322422,0,0,0,0,0,0,0,0,0,0,0,0.252697211763798,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.135804113845862,0,0,0,0,0.154936841185966,0,0,0,0,0,0,0|short_description=p4@Cnpy1}} | ||
|EntrezGene=269637 | |||
|HGNC= | |||
|MCL_coexpression_id=30 | |||
|UniProt= | |||
|association_with_transcript=-51bp_to_ENSMUST00000141196_5end | |||
|description=CAGE_peak_4_at_Cnpy1_5end | |||
|id=chr5:28536954..28536968,- | |||
|ontology_enrichment_celltype=CL:0000120!8.12e-11!3 | |||
|ontology_enrichment_celltype_v019_2=CL:0002614,1.88e-08,3 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0004733!8.07e-12!6;UBERON:0004732!8.07e-12!6;UBERON:0002028!8.07e-12!6;UBERON:0007277!8.07e-12!6;UBERON:0002037!1.14e-08!4;UBERON:0002680!1.14e-08!4;UBERON:0001895!1.14e-08!4;UBERON:0010092!1.14e-08!4;UBERON:0006215!1.14e-08!4 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002037,6.55e-23,4;UBERON:0002680,6.55e-23,4;UBERON:0001895,6.55e-23,4;UBERON:0010092,6.55e-23,4;UBERON:0006215,6.55e-23,4;UBERON:0004733,1.13e-15,6;UBERON:0004732,1.13e-15,6;UBERON:0002028,1.13e-15,6;UBERON:0007277,1.13e-15,6;UBERON:0002038,1.88e-08,3;UBERON:0009663,1.88e-08,3;UBERON:0009661,1.88e-08,3;UBERON:0000125,1.88e-08,3;UBERON:0002308,1.88e-08,3;UBERON:0003076,2.25e-08,12;UBERON:0003057,2.25e-08,12 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.7008658030214,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.404632921719196,0.528990979272033,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.67509799400829,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,24.8863677459815,24.5052646971742,0,0,0,0,0,0,0,0,0,0,0,0.203678727700633,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.117211686592203,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.45032120322422,0,0,0,0,0,0,0,0,0,0,0,0.252697211763798,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.135804113845862,0,0,0,0,0.154936841185966,0,0,0,0,0,0,0 | |||
|short_description=p4@Cnpy1 | |||
}} |
Revision as of 07:20, 14 September 2013
Short description: | p4@Cnpy1 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_4_at_Cnpy1_5end |
Coexpression cluster: | MCL_coexpression_mm9:30 |
Association with transcript: | -51bp_to_ENSMUST00000141196_5end |
EntrezGene: | Cnpy1 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
neuron of the substantia nigra | 1.88e-08 | 3 |
Ontology term | p-value | n |
---|---|---|
cerebellum | 6.55e-23 | 4 |
regional part of metencephalon | 6.55e-23 | 4 |
metencephalon | 6.55e-23 | 4 |
future metencephalon | 6.55e-23 | 4 |
rhombic lip | 6.55e-23 | 4 |
segmental subdivision of hindbrain | 1.13e-15 | 6 |
segmental subdivision of nervous system | 1.13e-15 | 6 |
hindbrain | 1.13e-15 | 6 |
presumptive hindbrain | 1.13e-15 | 6 |
substantia nigra | 1.88e-08 | 3 |
telencephalic nucleus | 1.88e-08 | 3 |
midbrain nucleus | 1.88e-08 | 3 |
neural nucleus | 1.88e-08 | 3 |
nucleus of brain | 1.88e-08 | 3 |
posterior neural tube | 2.25e-08 | 12 |
chordal neural plate | 2.25e-08 | 12 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.