FFCP PHASE1:Mm9::chr5:32655895..32655909,+: Difference between revisions
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{{FFCP | {{FFCP|EntrezGene=665270|HGNC=|MCL_coexpression_id=139|UniProt=|association_with_transcript=-32bp_to_ENSMUST00000144245_5end|description=CAGE_peak_6_at_Plb1_5end|id=chr5:32655895..32655909,+|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019_2=CL:0002293,1.97e-09,3|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0005178!1.73e-17!17;UBERON:0005181!1.73e-17!17;UBERON:0002224!1.73e-17!17;UBERON:0000915!1.73e-17!17;UBERON:0008947!1.73e-17!17;UBERON:0003258!1.73e-17!17;UBERON:0002048!4.04e-17!14;UBERON:0000117!4.04e-17!14;UBERON:0000171!4.04e-17!14;UBERON:0000170!4.04e-17!14;UBERON:0005597!4.04e-17!14;UBERON:0000118!4.04e-17!14;UBERON:0000065!6.32e-17!41;UBERON:0001004!2.64e-16!42;UBERON:0005153!1.33e-15!17;UBERON:0000310!3.80e-08!6;UBERON:0001443!3.80e-08!6;UBERON:0005157!5.08e-08!27;UBERON:0005911!5.94e-08!69|ontology_enrichment_uberon_v019_2=UBERON:0005153,4.98e-23,17;UBERON:0002048,1.38e-21,14;UBERON:0000117,1.38e-21,14;UBERON:0000171,1.38e-21,14;UBERON:0000170,1.38e-21,14;UBERON:0005597,1.38e-21,14;UBERON:0000118,1.38e-21,14;UBERON:0005157,1.77e-19,20;UBERON:0005178,1.07e-17,17;UBERON:0005181,1.07e-17,17;UBERON:0002224,1.07e-17,17;UBERON:0000915,1.07e-17,17;UBERON:0008947,1.07e-17,17;UBERON:0003258,1.07e-17,17;UBERON:0000310,2.78e-17,6;UBERON:0001443,2.78e-17,6;UBERON:0000065,1.37e-11,41;UBERON:0001004,2.72e-11,42|phase1_expression=0,0.348975407639361,0.454999239389536,0,0,0.16787927191189,0.233612640595526,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0850432901510698,0.198581902401771,0,0.47997726838022,0,0.57423196411502,0,0.215471232685889,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.53387290320252,2.33807404142582,2.12003744706204,0,1.28326477414318,2.54805239706646,0,0.216491041011214,0,0.505524445014783,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.175951124163949,0,0,0.348252166522167,0,0,0,0,0,0,0,0.180062061461015,0,0,0.154267112887378,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.232236671860439,0,0,0,0,0,0,0,0,0,0,0.216138049874694,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.287696137450811,0,0,0,0,0,0,0,0,1.66277871149944,0.189491411770485,0.488894929326078,1.18821560042632,1.87752198630802,5.19269398069629,4.28478553594825,1.36593553500459,0.630540576424764,0.44292937929755,0.478364305972461,0.81931657357869,0.863424909329478,1.01254341007058,0,0,0,1.65562047782839,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.164970122972535,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.304464949114599,0,1.27099242518292,0,0,0,0,0.119372344003136,0.164140899745061,0,0,0,0,0.185194527369712,0,0,0,0,0,0,0,0,0,0,0,0.655087691238533,0.134864346384821,0,0.26175594198403,0,0,0,0,0,0,0,0,0.117357238645754,0,0,0,0,0.316011120628178,0,0.205421914329655,0,0.179026695667481,0.596044064343795,0,0,0.403865799792591,0.15241361331,0.100826185136841,0.194915761479505,0.0962118416403295,0,0.906921534460845,0,0,0,0,0,0.183151624267265,0.214368379079066,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.183843508450014,0,0.206035057238894,0,0,0.25347929989024,0.377252682772152,0.187283014939765,0.128050304809739,0.0574354689556133,0.952587382566147,0.347652977834566,0,0.824171801606613,0.147198920134397,0,0.532427418478012,0.238436189947321,0.290692833264657,0.0941093804153306,0.25384382367503,0,0.263069711437843,0.135804113845862,0,0.118635018124174,0.197008964751127,0,0.154936841185966,0.192906610981141,0,0,0.429742108096597,0,0.220591419119515,0|short_description=p6@Plb1}} | ||
|EntrezGene=665270 | |||
|HGNC= | |||
|MCL_coexpression_id=139 | |||
|UniProt= | |||
|association_with_transcript=-32bp_to_ENSMUST00000144245_5end | |||
|description=CAGE_peak_6_at_Plb1_5end | |||
|id=chr5:32655895..32655909,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019_2=CL:0002293,1.97e-09,3 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0005178!1.73e-17!17;UBERON:0005181!1.73e-17!17;UBERON:0002224!1.73e-17!17;UBERON:0000915!1.73e-17!17;UBERON:0008947!1.73e-17!17;UBERON:0003258!1.73e-17!17;UBERON:0002048!4.04e-17!14;UBERON:0000117!4.04e-17!14;UBERON:0000171!4.04e-17!14;UBERON:0000170!4.04e-17!14;UBERON:0005597!4.04e-17!14;UBERON:0000118!4.04e-17!14;UBERON:0000065!6.32e-17!41;UBERON:0001004!2.64e-16!42;UBERON:0005153!1.33e-15!17;UBERON:0000310!3.80e-08!6;UBERON:0001443!3.80e-08!6;UBERON:0005157!5.08e-08!27;UBERON:0005911!5.94e-08!69 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0005153,4.98e-23,17;UBERON:0002048,1.38e-21,14;UBERON:0000117,1.38e-21,14;UBERON:0000171,1.38e-21,14;UBERON:0000170,1.38e-21,14;UBERON:0005597,1.38e-21,14;UBERON:0000118,1.38e-21,14;UBERON:0005157,1.77e-19,20;UBERON:0005178,1.07e-17,17;UBERON:0005181,1.07e-17,17;UBERON:0002224,1.07e-17,17;UBERON:0000915,1.07e-17,17;UBERON:0008947,1.07e-17,17;UBERON:0003258,1.07e-17,17;UBERON:0000310,2.78e-17,6;UBERON:0001443,2.78e-17,6;UBERON:0000065,1.37e-11,41;UBERON:0001004,2.72e-11,42 | |||
|phase1_expression=0,0.348975407639361,0.454999239389536,0,0,0.16787927191189,0.233612640595526,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0850432901510698,0.198581902401771,0,0.47997726838022,0,0.57423196411502,0,0.215471232685889,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.53387290320252,2.33807404142582,2.12003744706204,0,1.28326477414318,2.54805239706646,0,0.216491041011214,0,0.505524445014783,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.175951124163949,0,0,0.348252166522167,0,0,0,0,0,0,0,0.180062061461015,0,0,0.154267112887378,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.232236671860439,0,0,0,0,0,0,0,0,0,0,0.216138049874694,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.287696137450811,0,0,0,0,0,0,0,0,1.66277871149944,0.189491411770485,0.488894929326078,1.18821560042632,1.87752198630802,5.19269398069629,4.28478553594825,1.36593553500459,0.630540576424764,0.44292937929755,0.478364305972461,0.81931657357869,0.863424909329478,1.01254341007058,0,0,0,1.65562047782839,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.164970122972535,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.304464949114599,0,1.27099242518292,0,0,0,0,0.119372344003136,0.164140899745061,0,0,0,0,0.185194527369712,0,0,0,0,0,0,0,0,0,0,0,0.655087691238533,0.134864346384821,0,0.26175594198403,0,0,0,0,0,0,0,0,0.117357238645754,0,0,0,0,0.316011120628178,0,0.205421914329655,0,0.179026695667481,0.596044064343795,0,0,0.403865799792591,0.15241361331,0.100826185136841,0.194915761479505,0.0962118416403295,0,0.906921534460845,0,0,0,0,0,0.183151624267265,0.214368379079066,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.183843508450014,0,0.206035057238894,0,0,0.25347929989024,0.377252682772152,0.187283014939765,0.128050304809739,0.0574354689556133,0.952587382566147,0.347652977834566,0,0.824171801606613,0.147198920134397,0,0.532427418478012,0.238436189947321,0.290692833264657,0.0941093804153306,0.25384382367503,0,0.263069711437843,0.135804113845862,0,0.118635018124174,0.197008964751127,0,0.154936841185966,0.192906610981141,0,0,0.429742108096597,0,0.220591419119515,0 | |||
|short_description=p6@Plb1 | |||
}} |
Revision as of 07:28, 14 September 2013
Short description: | p6@Plb1 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_6_at_Plb1_5end |
Coexpression cluster: | MCL_coexpression_mm9:139 |
Association with transcript: | -32bp_to_ENSMUST00000144245_5end |
EntrezGene: | Plb1 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
epithelial cell of thymus | 1.97e-09 | 3 |
Ontology term | p-value | n |
---|---|---|
epithelial bud | 4.98e-23 | 17 |
lung | 1.38e-21 | 14 |
respiratory tube | 1.38e-21 | 14 |
respiration organ | 1.38e-21 | 14 |
pair of lungs | 1.38e-21 | 14 |
lung primordium | 1.38e-21 | 14 |
lung bud | 1.38e-21 | 14 |
epithelial fold | 1.77e-19 | 20 |
thoracic cavity element | 1.07e-17 | 17 |
thoracic segment organ | 1.07e-17 | 17 |
thoracic cavity | 1.07e-17 | 17 |
thoracic segment of trunk | 1.07e-17 | 17 |
respiratory primordium | 1.07e-17 | 17 |
endoderm of foregut | 1.07e-17 | 17 |
breast | 2.78e-17 | 6 |
chest | 2.78e-17 | 6 |
respiratory tract | 1.37e-11 | 41 |
respiratory system | 2.72e-11 | 42 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.