FFCP PHASE1:Mm9::chr5:3927857..3927888,+: Difference between revisions
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{{FFCP | {{FFCP|EntrezGene=100986|HGNC=|MCL_coexpression_id=643|UniProt=|association_with_transcript=-165bp_to_ENSMUST00000132058,uc008wib.1_5end|description=CAGE_peak_3_at_Akap9_5end|id=chr5:3927857..3927888,+|ontology_enrichment_celltype=CL:0000540!1.93e-07!33;CL:0000047!1.93e-07!33;CL:0000031!1.93e-07!33;CL:0000404!1.93e-07!33;CL:0000117!6.47e-07!23;CL:0000337!6.47e-07!23|ontology_enrichment_celltype_v019_2=CL:0000117,3.53e-08,23;CL:0000337,3.53e-08,23;CL:0002609,6.89e-07,6|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0003056!7.31e-10!49;UBERON:0002346!5.10e-09!71;UBERON:0003075!5.10e-09!71;UBERON:0007284!5.10e-09!71;UBERON:0001017!6.06e-08!73;UBERON:0005743!6.06e-08!73;UBERON:0004121!9.95e-08!102;UBERON:0000924!9.95e-08!102;UBERON:0006601!9.95e-08!102;UBERON:0000033!1.05e-07!63;UBERON:0001049!1.14e-07!52;UBERON:0005068!1.14e-07!52;UBERON:0006241!1.14e-07!52;UBERON:0007135!1.14e-07!52;UBERON:0000073!1.50e-07!75;UBERON:0001016!1.50e-07!75;UBERON:0003080!2.16e-07!40;UBERON:0002780!3.49e-07!39;UBERON:0001890!3.49e-07!39;UBERON:0006240!3.49e-07!39;UBERON:0002020!3.62e-07!34|ontology_enrichment_uberon_v019_2=UBERON:0003056,2.56e-13,49;UBERON:0002346,2.42e-11,64;UBERON:0003075,2.42e-11,64;UBERON:0007284,2.42e-11,64;UBERON:0003080,5.44e-10,40;UBERON:0002780,1.09e-09,39;UBERON:0001890,1.09e-09,39;UBERON:0006240,1.09e-09,39;UBERON:0002020,2.41e-09,34;UBERON:0010371,6.08e-09,73;UBERON:0001049,1.27e-08,52;UBERON:0005068,1.27e-08,52;UBERON:0006241,1.27e-08,52;UBERON:0007135,1.27e-08,52;UBERON:0000955,5.74e-08,47;UBERON:0006238,5.74e-08,47;UBERON:0000073,5.98e-08,54;UBERON:0003528,7.47e-08,29;UBERON:0002791,7.47e-08,29;UBERON:0001893,7.47e-08,29;UBERON:0001017,9.41e-08,73;UBERON:0004121,9.84e-08,95;UBERON:0000924,9.84e-08,95;UBERON:0006601,9.84e-08,95;UBERON:0002616,1.48e-07,46;UBERON:0001016,3.00e-07,75|phase1_expression=0.80074423552397,0.348975407639361,0,0.30246421130683,0,0.503637815735669,0.233612640595526,0,0,0,0,0,0,0,0,0,0,0.157731082679119,0,0,5.69790044012167,0.198581902401771,0,0.319984845586813,0,0.57423196411502,0.86152399231815,0.430942465371778,0,0,0.443461021310609,0,0,0,0,0,0.204169356262369,0,0,0,1.17646297606203,0,0,0.125896817975577,0.101376931219515,0.183546752161682,0,0,0,0,0,0,0,0,0,0.257259436035947,0,0,3.03474691289397,2.64495489636016,1.90149421051854,0,0,0,0,0,0,0.384218305321555,5.80661828927475,3.24014251996058,4.41682418837902,1.14260393761521,0.883474163806454,5.02212276781312,3.83381884072945,2.75765635983006,0,0.510749352340751,0.46081959976873,2.76961204233407,2.01272815925301,4.16730696445408,0,0.56276261003168,1.06958773443767,2.94628585473668,2.98980529678116,1.86399445825301,0.151452386666368,0.226714680320357,0.289864488701678,0,0,0,0,0,0.140444420131752,0,0,0,1.12674735821344,0,0,0,0,0,0,0.5709193985953,0.258937883647172,0,0.346970653532272,0.304465478312141,0.461230994512117,0.301445281105245,0.823120949949934,0.125666591329675,0.247194967734374,0.144599356919912,0,0.323533699894818,0.220841518460394,0,0,0.585561594023094,0.628340120440365,0,0.11981512450592,0.599902730993408,0.381210681219194,1.19832511523858,5.03250663100489,14.4502504929794,1.39059456153821,2.55715457330331,1.24672826735736,2.43361894601636,2.24046600470696,0.124406970610093,0.252722758433675,0.210441855886474,1.69156575851515,2.29902104433473,2.52086981727489,3.0140963567143,3.74200745332303,4.09963904911519,2.52994656311268,0.258703370739016,0.215567992932842,1.13463648100692,1.93546236580344,0.657587197282725,1.11218899690239,0.696504333044333,0,1.39323986772945,0,0.772043721344145,0,1.03562886267751,0.938104239924385,0.540186184383045,0.23674473558521,1.18058539048442,0.925602677324269,0.232533944750408,1.07309360559848,1.05088808130453,0.329119699826961,0.656669856316381,0.324275238183423,0.146199987425332,0,0.134206418760372,0.630869845692382,16.0531195311684,0,0,0.853153002140936,2.09013004674395,0.644337306610467,1.00841762311671,0.889512175379481,0.190225626112559,0,0.329397909448022,0.754005626400808,0.795825888164603,0.58489226135736,0,0.432276099749388,0,0.189667900953082,1.5994791765362,0,0.814605311381257,0.775809948670503,1.61312385747733,0.758838445491087,0,0.31399745568275,0,0,0,0.196558995113203,0.224862112384854,0.202860121388503,0,0.25462585178142,0,0.486405680325106,0,0,0.744281895337007,0,0,0,0.482443521363367,0.554259570499814,0.37898282354097,1.62964976442026,1.18821560042632,1.40814148973101,2.01007508930179,1.19021820443007,2.14647012643579,1.57635144106191,1.7717175171902,1.11618338060241,0.655453258862952,0.863424909329478,0.578596234326046,0,0,0,0,0.160550589987792,0.820481806145422,0,0.504941854408746,0.631016438832513,0.390438744296638,1.50796378412959,0.477937595905104,0.891194696329576,1.13230612315533,0.404810701674894,1.16902343164525,1.97643888973262,1.92792789853084,0.99358059645788,0.178065603667255,1.46598263418218,0.494910368917606,0,0.242780636154981,0.604647113929502,0.754420319023592,0,0,0.775284879504663,0,0,0,0,0,0,1.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| ||
|EntrezGene=100986 | |||
|HGNC= | |||
|MCL_coexpression_id=643 | |||
|UniProt= | |||
|association_with_transcript=-165bp_to_ENSMUST00000132058,uc008wib.1_5end | |||
|description=CAGE_peak_3_at_Akap9_5end | |||
|id=chr5:3927857..3927888,+ | |||
|ontology_enrichment_celltype=CL:0000540!1.93e-07!33;CL:0000047!1.93e-07!33;CL:0000031!1.93e-07!33;CL:0000404!1.93e-07!33;CL:0000117!6.47e-07!23;CL:0000337!6.47e-07!23 | |||
|ontology_enrichment_celltype_v019_2=CL:0000117,3.53e-08,23;CL:0000337,3.53e-08,23;CL:0002609,6.89e-07,6 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0003056!7.31e-10!49;UBERON:0002346!5.10e-09!71;UBERON:0003075!5.10e-09!71;UBERON:0007284!5.10e-09!71;UBERON:0001017!6.06e-08!73;UBERON:0005743!6.06e-08!73;UBERON:0004121!9.95e-08!102;UBERON:0000924!9.95e-08!102;UBERON:0006601!9.95e-08!102;UBERON:0000033!1.05e-07!63;UBERON:0001049!1.14e-07!52;UBERON:0005068!1.14e-07!52;UBERON:0006241!1.14e-07!52;UBERON:0007135!1.14e-07!52;UBERON:0000073!1.50e-07!75;UBERON:0001016!1.50e-07!75;UBERON:0003080!2.16e-07!40;UBERON:0002780!3.49e-07!39;UBERON:0001890!3.49e-07!39;UBERON:0006240!3.49e-07!39;UBERON:0002020!3.62e-07!34 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0003056,2.56e-13,49;UBERON:0002346,2.42e-11,64;UBERON:0003075,2.42e-11,64;UBERON:0007284,2.42e-11,64;UBERON:0003080,5.44e-10,40;UBERON:0002780,1.09e-09,39;UBERON:0001890,1.09e-09,39;UBERON:0006240,1.09e-09,39;UBERON:0002020,2.41e-09,34;UBERON:0010371,6.08e-09,73;UBERON:0001049,1.27e-08,52;UBERON:0005068,1.27e-08,52;UBERON:0006241,1.27e-08,52;UBERON:0007135,1.27e-08,52;UBERON:0000955,5.74e-08,47;UBERON:0006238,5.74e-08,47;UBERON:0000073,5.98e-08,54;UBERON:0003528,7.47e-08,29;UBERON:0002791,7.47e-08,29;UBERON:0001893,7.47e-08,29;UBERON:0001017,9.41e-08,73;UBERON:0004121,9.84e-08,95;UBERON:0000924,9.84e-08,95;UBERON:0006601,9.84e-08,95;UBERON:0002616,1.48e-07,46;UBERON:0001016,3.00e-07,75 | |||
|phase1_expression=0.80074423552397,0.348975407639361,0,0.30246421130683,0,0.503637815735669,0.233612640595526,0,0,0,0,0,0,0,0,0,0,0.157731082679119,0,0,5.69790044012167,0.198581902401771,0,0.319984845586813,0,0.57423196411502,0.86152399231815,0.430942465371778,0,0,0.443461021310609,0,0,0,0,0,0.204169356262369,0,0,0,1.17646297606203,0,0,0.125896817975577,0.101376931219515,0.183546752161682,0,0,0,0,0,0,0,0,0,0.257259436035947,0,0,3.03474691289397,2.64495489636016,1.90149421051854,0,0,0,0,0,0,0.384218305321555,5.80661828927475,3.24014251996058,4.41682418837902,1.14260393761521,0.883474163806454,5.02212276781312,3.83381884072945,2.75765635983006,0,0.510749352340751,0.46081959976873,2.76961204233407,2.01272815925301,4.16730696445408,0,0.56276261003168,1.06958773443767,2.94628585473668,2.98980529678116,1.86399445825301,0.151452386666368,0.226714680320357,0.289864488701678,0,0,0,0,0,0.140444420131752,0,0,0,1.12674735821344,0,0,0,0,0,0,0.5709193985953,0.258937883647172,0,0.346970653532272,0.304465478312141,0.461230994512117,0.301445281105245,0.823120949949934,0.125666591329675,0.247194967734374,0.144599356919912,0,0.323533699894818,0.220841518460394,0,0,0.585561594023094,0.628340120440365,0,0.11981512450592,0.599902730993408,0.381210681219194,1.19832511523858,5.03250663100489,14.4502504929794,1.39059456153821,2.55715457330331,1.24672826735736,2.43361894601636,2.24046600470696,0.124406970610093,0.252722758433675,0.210441855886474,1.69156575851515,2.29902104433473,2.52086981727489,3.0140963567143,3.74200745332303,4.09963904911519,2.52994656311268,0.258703370739016,0.215567992932842,1.13463648100692,1.93546236580344,0.657587197282725,1.11218899690239,0.696504333044333,0,1.39323986772945,0,0.772043721344145,0,1.03562886267751,0.938104239924385,0.540186184383045,0.23674473558521,1.18058539048442,0.925602677324269,0.232533944750408,1.07309360559848,1.05088808130453,0.329119699826961,0.656669856316381,0.324275238183423,0.146199987425332,0,0.134206418760372,0.630869845692382,16.0531195311684,0,0,0.853153002140936,2.09013004674395,0.644337306610467,1.00841762311671,0.889512175379481,0.190225626112559,0,0.329397909448022,0.754005626400808,0.795825888164603,0.58489226135736,0,0.432276099749388,0,0.189667900953082,1.5994791765362,0,0.814605311381257,0.775809948670503,1.61312385747733,0.758838445491087,0,0.31399745568275,0,0,0,0.196558995113203,0.224862112384854,0.202860121388503,0,0.25462585178142,0,0.486405680325106,0,0,0.744281895337007,0,0,0,0.482443521363367,0.554259570499814,0.37898282354097,1.62964976442026,1.18821560042632,1.40814148973101,2.01007508930179,1.19021820443007,2.14647012643579,1.57635144106191,1.7717175171902,1.11618338060241,0.655453258862952,0.863424909329478,0.578596234326046,0,0,0,0,0.160550589987792,0.820481806145422,0,0.504941854408746,0.631016438832513,0.390438744296638,1.50796378412959,0.477937595905104,0.891194696329576,1.13230612315533,0.404810701674894,1.16902343164525,1.97643888973262,1.92792789853084,0.99358059645788,0.178065603667255,1.46598263418218,0.494910368917606,0,0.242780636154981,0.604647113929502,0.754420319023592,0,0,0.775284879504663,0,0,0,0,0,0,1.44048875225048,0.646793418913773,1.28602221018955,2.83744373827638,2.14042581122485,2.79733335023606,0.304464949114599,0,0,0,0.32977250588296,0.645857706783622,0.784068024066026,0.238744688006273,0.984845398470368,0,0.927126510052548,0,0.412773735926445,0.370389054739423,0.565105371014073,0.136694227721025,0,1.01987057996313,0,0.552799895217695,0,1.26534397432454,1.01659733563424,0.540026704109006,1.25452977608681,0.218362563746178,0.134864346384821,0.826534557253359,0,0.129614973291793,0,15.2197093444731,0.897099276263873,0.827292452285488,0,0.258319646955462,0.675824501963113,1.87771581833206,2.21347454234715,2.41176492179135,6.03960302065015,22.1783104818556,0,0.608175645870493,0,0.51968329191118,0.179026695667481,0,0.480781798079875,0.590758108698309,0.605798699688886,0.381034033274999,0.403304740547362,0.194915761479505,0.192423683280659,0.467507608726276,0.226730383615211,0,0.179427713218951,0,0,0,0.36630324853453,0.214368379079066,0,3.95326289831947,1.84130094602871,1.14579102687879,1.3748254587495,1.37016503954128,0,1.35004500046361,0.45032120322422,0,0.51776031175182,1.55681021376265,4.38927360741134,2.39027048055788,4.132814190161,1.88651846365184,0.551530525350042,3.77819437262746,2.88449080134452,1.92551525755089,2.52697211763797,2.5347929989024,2.26351609663291,2.06011316433741,2.36893063898016,3.27382173046996,0.476293691283074,2.20180219295225,3.8581844092741,2.47251540481984,0.883193520806384,2.05721551431249,1.59728225543404,1.43061713968393,1.74415699958794,2.54095327121393,2.70766745253365,2.74391959309159,0.526139422875686,1.49384525230448,1.12228454331548,2.84724043498018,3.15214343601803,2.45538625901814,2.01417893541756,1.15743966588685,1.74867404556562,1.87145286756327,3.22306581072447,0.956441660344217,0.220591419119515,0.463735671240843 | |||
|short_description=p3@Akap9 | |||
}} |
Revision as of 07:38, 14 September 2013
Short description: | p3@Akap9 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_3_at_Akap9_5end |
Coexpression cluster: | MCL_coexpression_mm9:643 |
Association with transcript: | -165bp_to_ENSMUST00000132058, uc008wib.1_5end |
EntrezGene: | Akap9 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
CNS neuron (sensu Vertebrata) | 3.53e-08 | 23 |
neuroblast (sensu Vertebrata) | 3.53e-08 | 23 |
neuron of cerebral cortex | 6.89e-07 | 6 |
Ontology term | p-value | n |
---|---|---|
pre-chordal neural plate | 2.56e-13 | 49 |
neurectoderm | 2.42e-11 | 64 |
neural plate | 2.42e-11 | 64 |
presumptive neural plate | 2.42e-11 | 64 |
anterior neural tube | 5.44e-10 | 40 |
regional part of forebrain | 1.09e-09 | 39 |
forebrain | 1.09e-09 | 39 |
future forebrain | 1.09e-09 | 39 |
gray matter | 2.41e-09 | 34 |
ecto-epithelium | 6.08e-09 | 73 |
neural tube | 1.27e-08 | 52 |
neural rod | 1.27e-08 | 52 |
future spinal cord | 1.27e-08 | 52 |
neural keel | 1.27e-08 | 52 |
brain | 5.74e-08 | 47 |
future brain | 5.74e-08 | 47 |
regional part of nervous system | 5.98e-08 | 54 |
brain grey matter | 7.47e-08 | 29 |
regional part of telencephalon | 7.47e-08 | 29 |
telencephalon | 7.47e-08 | 29 |
central nervous system | 9.41e-08 | 73 |
ectoderm-derived structure | 9.84e-08 | 95 |
ectoderm | 9.84e-08 | 95 |
presumptive ectoderm | 9.84e-08 | 95 |
regional part of brain | 1.48e-07 | 46 |
nervous system | 3.00e-07 | 75 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.