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FFCP PHASE1:Mm9::chr5:53225407..53225422,+: Difference between revisions

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{{FFCP
{{FFCP|EntrezGene=52206|HGNC=|UniProt=Q3TM92,Q91W96|association_with_transcript=33bp_to_NM_024213,uc008xkw.1,uc008xkx.1_5end|description=CAGE_peak_3_at_Anapc4_5end|id=chr5:53225407..53225422,+|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019_2=|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0000077!1.53e-11!97;UBERON:0003104!1.90e-11!131;UBERON:0009142!1.90e-11!131;UBERON:0005178!3.06e-11!17;UBERON:0005181!3.06e-11!17;UBERON:0002224!3.06e-11!17;UBERON:0000915!3.06e-11!17;UBERON:0008947!3.06e-11!17;UBERON:0003258!3.06e-11!17;UBERON:0005157!4.68e-11!27;UBERON:0005153!5.50e-11!17;UBERON:0004119!2.04e-10!130;UBERON:0000925!2.04e-10!130;UBERON:0006595!2.04e-10!130;UBERON:0001041!5.50e-10!92;UBERON:0001007!1.51e-09!128;UBERON:0001555!1.51e-09!128;UBERON:0007026!1.51e-09!128;UBERON:0002048!3.25e-09!14;UBERON:0000117!3.25e-09!14;UBERON:0000171!3.25e-09!14;UBERON:0000170!3.25e-09!14;UBERON:0005597!3.25e-09!14;UBERON:0000118!3.25e-09!14;UBERON:0000065!3.99e-09!41;UBERON:0004921!4.70e-09!126;UBERON:0004185!4.70e-09!126;UBERON:0001004!8.51e-09!42;UBERON:0000926!1.63e-08!193;UBERON:0004120!1.63e-08!193;UBERON:0006603!1.63e-08!193;UBERON:0000464!3.96e-08!57;UBERON:0002100!6.08e-08!98;UBERON:0000466!3.79e-07!79;UBERON:0009569!6.23e-07!66|ontology_enrichment_uberon_v019_2=UBERON:0005178,1.89e-11,17;UBERON:0005181,1.89e-11,17;UBERON:0002224,1.89e-11,17;UBERON:0000915,1.89e-11,17;UBERON:0008947,1.89e-11,17;UBERON:0003258,1.89e-11,17;UBERON:0005153,3.45e-11,17;UBERON:0002100,1.97e-10,90;UBERON:0005157,3.03e-10,20;UBERON:0000065,1.80e-09,41;UBERON:0002048,2.22e-09,14;UBERON:0000117,2.22e-09,14;UBERON:0000171,2.22e-09,14;UBERON:0000170,2.22e-09,14;UBERON:0005597,2.22e-09,14;UBERON:0000118,2.22e-09,14;UBERON:0001004,3.95e-09,42;UBERON:0005177,1.15e-08,79;UBERON:0004119,1.25e-08,118;UBERON:0000925,1.25e-08,118;UBERON:0006595,1.25e-08,118;UBERON:0001041,2.31e-08,80;UBERON:0001007,7.89e-08,116;UBERON:0001555,7.89e-08,116;UBERON:0007026,7.89e-08,116;UBERON:0004921,2.24e-07,114;UBERON:0009569,7.87e-07,66|phase1_expression=0.960893082628764,1.39590163055744,1.36499771816861,2.11724947914781,3.00537437967808,1.00727563147134,1.63528848416868,2.96983643915625,3.37892933164,3.5109678948299,0.856089841127525,1.03703806693937,2.73921167889929,2.27293046289393,1.99865857089398,1.82227740650843,0.699561878128147,0.630924330716475,0.959801035240171,0.84877930359606,0.935476191661768,2.48227378002213,3.91799683708403,2.87986361028132,2.2940928106717,0.57423196411502,0.430761996159075,3.01659725760245,1.52018735565099,1.51218077855958,2.21730510655305,1.27006134691926,0.61506478758457,0,1.1554064790051,1.32987716286794,2.04169356262369,3.76678467663217,0.7813353445238,2.09409497589519,1.17646297606203,1.36609096991689,3.39857247121808,3.9028013572429,3.14268486780495,4.03802854755699,0,0.218025156380447,0.219686182734472,0.972149495371417,0.139986421625363,0,0.838913030288682,2.90144856804538,1.68046899571232,3.60163210450326,1.14613375975503,1.03134418455488,0,0,0,0,0,0,0,0,0,0.384218305321555,0,0.135005938331691,0,0.571301968807607,0.441737081903227,0.489963196859816,0.0958454710182364,0,0,0.510749352340751,0.307213066512487,0.791317726381163,0,0.52091337055676,0.837548997004143,0.56276261003168,0.15279824777681,0.883885756421003,0.142371680799103,0.931997229126503,1.51452386666368,1.81371744256285,1.15945795480671,0,0,1.61910957491345,1.29955283489534,1.34408066129201,1.40444420131752,4.09032774187339,2.59786004602869,3.5333957451034,2.39433813620357,2.56652954828636,0,0,4.32982082022428,7.85415582972806,7.58286667522175,0.68510327831436,0,3.41416919849097,2.77576522825817,2.43572382649713,1.84492397804847,3.3158980921577,1.99900802130698,1.50799909595611,2.96633961281249,2.31358971071859,0.884610551949874,1.45590164952668,0.883366073841574,0.484875253135222,1.86391761218122,0.878342391034642,0.41889341362691,1.27728527604296,2.03685711660064,2.39961092397363,1.14363204365758,1.19832511523858,0.457500602818626,0.879580464790051,0.521472960576829,0.255715457330331,0.83115217823824,0.324482526135515,1.01839363850316,1.11966273549084,2.52722758433675,1.89397670297827,2.21204753036596,1.14951052216736,1.44049703844279,0.753524089178575,1.15662048557257,1.2811372028485,0.749613796477831,0.776110112217047,4.31135985865684,1.32374256117473,3.51902248327898,2.84954452155847,1.94633074457919,1.39300866608867,2.46938563689532,2.58744546864041,0,1.28673953557358,1.13665399758237,2.07125772535502,3.98694301967864,2.34080679899319,1.42046841351126,1.37734962223183,1.69693824176116,0.465067889500816,1.3413670069981,1.05088808130453,1.48103864922132,1.97000956894914,0.972825714550269,0.877199924551994,0.878200461164203,1.8788898626452,0.210289948564127,0.514523061896422,2.31293148088659,0.528901133327089,4.69234151177515,1.39342003116263,1.28867461322093,1.00841762311671,0.444756087689741,1.52180500890047,1.89811624617805,0.823494773620054,1.50801125280162,1.79060824837036,1.16978452271472,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|EntrezGene=52206
|HGNC=
|UniProt=Q3TM92,Q91W96
|association_with_transcript=33bp_to_NM_024213,uc008xkw.1,uc008xkx.1_5end
|description=CAGE_peak_3_at_Anapc4_5end
|id=chr5:53225407..53225422,+
|ontology_enrichment_celltype=
|ontology_enrichment_celltype_v019_2=
|ontology_enrichment_disease=
|ontology_enrichment_disease_v019_2=
|ontology_enrichment_uberon=UBERON:0000077!1.53e-11!97;UBERON:0003104!1.90e-11!131;UBERON:0009142!1.90e-11!131;UBERON:0005178!3.06e-11!17;UBERON:0005181!3.06e-11!17;UBERON:0002224!3.06e-11!17;UBERON:0000915!3.06e-11!17;UBERON:0008947!3.06e-11!17;UBERON:0003258!3.06e-11!17;UBERON:0005157!4.68e-11!27;UBERON:0005153!5.50e-11!17;UBERON:0004119!2.04e-10!130;UBERON:0000925!2.04e-10!130;UBERON:0006595!2.04e-10!130;UBERON:0001041!5.50e-10!92;UBERON:0001007!1.51e-09!128;UBERON:0001555!1.51e-09!128;UBERON:0007026!1.51e-09!128;UBERON:0002048!3.25e-09!14;UBERON:0000117!3.25e-09!14;UBERON:0000171!3.25e-09!14;UBERON:0000170!3.25e-09!14;UBERON:0005597!3.25e-09!14;UBERON:0000118!3.25e-09!14;UBERON:0000065!3.99e-09!41;UBERON:0004921!4.70e-09!126;UBERON:0004185!4.70e-09!126;UBERON:0001004!8.51e-09!42;UBERON:0000926!1.63e-08!193;UBERON:0004120!1.63e-08!193;UBERON:0006603!1.63e-08!193;UBERON:0000464!3.96e-08!57;UBERON:0002100!6.08e-08!98;UBERON:0000466!3.79e-07!79;UBERON:0009569!6.23e-07!66
|ontology_enrichment_uberon_v019_2=UBERON:0005178,1.89e-11,17;UBERON:0005181,1.89e-11,17;UBERON:0002224,1.89e-11,17;UBERON:0000915,1.89e-11,17;UBERON:0008947,1.89e-11,17;UBERON:0003258,1.89e-11,17;UBERON:0005153,3.45e-11,17;UBERON:0002100,1.97e-10,90;UBERON:0005157,3.03e-10,20;UBERON:0000065,1.80e-09,41;UBERON:0002048,2.22e-09,14;UBERON:0000117,2.22e-09,14;UBERON:0000171,2.22e-09,14;UBERON:0000170,2.22e-09,14;UBERON:0005597,2.22e-09,14;UBERON:0000118,2.22e-09,14;UBERON:0001004,3.95e-09,42;UBERON:0005177,1.15e-08,79;UBERON:0004119,1.25e-08,118;UBERON:0000925,1.25e-08,118;UBERON:0006595,1.25e-08,118;UBERON:0001041,2.31e-08,80;UBERON:0001007,7.89e-08,116;UBERON:0001555,7.89e-08,116;UBERON:0007026,7.89e-08,116;UBERON:0004921,2.24e-07,114;UBERON:0009569,7.87e-07,66
|phase1_expression=0.960893082628764,1.39590163055744,1.36499771816861,2.11724947914781,3.00537437967808,1.00727563147134,1.63528848416868,2.96983643915625,3.37892933164,3.5109678948299,0.856089841127525,1.03703806693937,2.73921167889929,2.27293046289393,1.99865857089398,1.82227740650843,0.699561878128147,0.630924330716475,0.959801035240171,0.84877930359606,0.935476191661768,2.48227378002213,3.91799683708403,2.87986361028132,2.2940928106717,0.57423196411502,0.430761996159075,3.01659725760245,1.52018735565099,1.51218077855958,2.21730510655305,1.27006134691926,0.61506478758457,0,1.1554064790051,1.32987716286794,2.04169356262369,3.76678467663217,0.7813353445238,2.09409497589519,1.17646297606203,1.36609096991689,3.39857247121808,3.9028013572429,3.14268486780495,4.03802854755699,0,0.218025156380447,0.219686182734472,0.972149495371417,0.139986421625363,0,0.838913030288682,2.90144856804538,1.68046899571232,3.60163210450326,1.14613375975503,1.03134418455488,0,0,0,0,0,0,0,0,0,0.384218305321555,0,0.135005938331691,0,0.571301968807607,0.441737081903227,0.489963196859816,0.0958454710182364,0,0,0.510749352340751,0.307213066512487,0.791317726381163,0,0.52091337055676,0.837548997004143,0.56276261003168,0.15279824777681,0.883885756421003,0.142371680799103,0.931997229126503,1.51452386666368,1.81371744256285,1.15945795480671,0,0,1.61910957491345,1.29955283489534,1.34408066129201,1.40444420131752,4.09032774187339,2.59786004602869,3.5333957451034,2.39433813620357,2.56652954828636,0,0,4.32982082022428,7.85415582972806,7.58286667522175,0.68510327831436,0,3.41416919849097,2.77576522825817,2.43572382649713,1.84492397804847,3.3158980921577,1.99900802130698,1.50799909595611,2.96633961281249,2.31358971071859,0.884610551949874,1.45590164952668,0.883366073841574,0.484875253135222,1.86391761218122,0.878342391034642,0.41889341362691,1.27728527604296,2.03685711660064,2.39961092397363,1.14363204365758,1.19832511523858,0.457500602818626,0.879580464790051,0.521472960576829,0.255715457330331,0.83115217823824,0.324482526135515,1.01839363850316,1.11966273549084,2.52722758433675,1.89397670297827,2.21204753036596,1.14951052216736,1.44049703844279,0.753524089178575,1.15662048557257,1.2811372028485,0.749613796477831,0.776110112217047,4.31135985865684,1.32374256117473,3.51902248327898,2.84954452155847,1.94633074457919,1.39300866608867,2.46938563689532,2.58744546864041,0,1.28673953557358,1.13665399758237,2.07125772535502,3.98694301967864,2.34080679899319,1.42046841351126,1.37734962223183,1.69693824176116,0.465067889500816,1.3413670069981,1.05088808130453,1.48103864922132,1.97000956894914,0.972825714550269,0.877199924551994,0.878200461164203,1.8788898626452,0.210289948564127,0.514523061896422,2.31293148088659,0.528901133327089,4.69234151177515,1.39342003116263,1.28867461322093,1.00841762311671,0.444756087689741,1.52180500890047,1.89811624617805,0.823494773620054,1.50801125280162,1.79060824837036,1.16978452271472,1.79763881730844,1.72910439899755,1.1948476395262,0.948339504765408,1.71372768914593,1.1270773567308,2.44381593414377,1.55161989734101,1.40271639780637,1.70738650235495,1.18088118383682,1.255989822731,1.48076596706161,1.48226313543574,1.16791574001266,0.982794975566015,0.674586337154561,1.21716072833102,0.964708639009667,2.5462585178142,2.30156909960649,1.13494658742525,2.74561413188081,10.0637744569148,3.72140947668503,3.12037673114561,1.76805214562978,3.22915344339442,2.8946611281802,3.8798169934987,3.03186258832776,4.23708938749267,3.56464680127895,4.22442446919304,6.365237782789,6.9032655856944,7.41507861859636,3.4679731703362,4.65075848262427,3.6674596791222,4.26044618260919,3.28101465545202,3.32692834737477,0,1.08781136763742,6.88469982226651,4.13905119457099,0.963303539926752,0.937693492737625,1.47541450839008,0.757412781613119,1.26203287766503,1.95219372148319,1.93881057959519,0.955875191810208,0.668396022247182,1.13230612315533,2.02405350837447,0.876767573733936,1.58115111178609,0.642642632843614,2.55492153374884,1.24645922567079,1.62886959353576,2.96946221350564,2.65490276679926,2.18502572539483,1.81394134178851,1.32023555829129,2.06711325016541,2.45948118355142,2.32585463851399,5.45300594216258,2.49548164869305,3.16036757935816,3.16255825724996,0,2.38307724027652,3.06103859853227,1.81102157295856,1.28602221018955,3.19212420556092,2.14042581122485,3.29098041204242,1.522324745573,4.4587624532105,4.02480934641258,3.52845436887939,0.98931751764888,1.45317984026315,2.23157822234177,2.74556391207214,2.46211349617592,1.45740418314925,0.741701208042039,2.73393409276564,1.65109494370578,2.40752885580625,1.69531611304222,1.50363650493128,1.37266903923914,1.5298058699447,1.81936888020755,1.79659965945751,1.90934123603023,1.73984796469624,1.62655573701479,1.51207477150522,2.09088296014469,3.9305261474312,2.42755823492677,2.31429676030941,1.04702376793612,1.8146096260851,1.24267862617385,0.56369293868419,2.24274819065968,1.48912641411388,0.777804753376191,1.29159823477731,0.844780627453891,1.05621514781179,2.0832701575032,3.35549902162275,1.20792060413003,1.15212002503146,2.8441000856536,2.43270258348197,1.23253148597793,1.29920822977795,1.9692936523423,1.19208812868759,1.9231271923195,2.51072196196781,2.3222283488074,1.600342939755,2.11734988787365,2.43644701849381,2.30908419936791,2.45441494581295,1.81384306892169,0.887943813496259,2.42227412845584,3.69346156000973,1.73870634628971,2.064507229963,2.01466786693992,2.14368379079066,3.00943262421218,0,0.460325236507177,1.14579102687879,0.343706364687375,0,0.755393897389701,0,0,0,0,1.97195960409936,1.59609949360412,2.56100408631201,1.21553358534147,3.5634237646757,1.2869045591501,1.55572709461131,1.64828045791115,2.24643446714271,1.51618327058278,1.01391719956096,1.13175804831646,1.12369808963859,1.6646539625266,1.43588672389033,2.85776214769844,1.62238056322798,1.73618298417335,1.23625770240992,1.76638704161277,1.02860775715625,2.8396128985494,1.43061713968393,1.88950341622027,1.69396884747595,1.94613598150856,1.82927972872773,1.57841826862706,2.30866993537965,2.24456908663095,1.30498519936592,1.37906275325789,0.818462086339379,1.70430525304563,1.92906610981141,1.49886346762768,2.10538447600868,1.93383948643468,1.53030665655075,1.76473135295612,0.927471342481686
|short_description=p3@Anapc4
}}

Revision as of 07:45, 14 September 2013

Short description:p3@Anapc4
Species:Mouse (Mus musculus)
DPI dataset: NA
TSS-like-by-RIKEN-classifier(Yes/No): NA
DHS support(Yes/No): NA
Description: CAGE_peak_3_at_Anapc4_5end
Coexpression cluster:NA
Association with transcript: 33bp_to_NM_024213, uc008xkw.1, uc008xkx.1_5end
EntrezGene:Anapc4
Link to Zenbu:ZENBU


View on UCSC genome browser

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CAGE Expression

Sample

p3@Anapc4

Atoh1+ Inner ear hair cells - organ of corti, pool1.CNhs12533.12158-128G70.96
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13242.11850-124I51.40
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13233.11851-124I61.36
CD326+ enterocyte, pool1.CNhs13542.11848-124I32.12
CD326+ enterocyte, pool2.CNhs13197.11849-124I43.01
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13236.11852-124I71.01
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13210.11853-124I81.64
CD4+CD25+ regulatory T cells, pool2 (Balb_cAJcl).CNhs13221.11818-124E92.97
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool1 (C57BL_6J).CNhs13219.11816-124E73.38
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool2 (Balb_cAJcl).CNhs13226.11820-124F23.51
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool1 (C57BL_6J).CNhs13218.11815-124E60.86
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool2 (Balb_cAJcl).CNhs13225.11819-124F11.04
CD4+CD25-CD44- naive conventional T cells, pool1 (C57BL_6J).CNhs13217.11813-124E42.74
CD4+CD25-CD44- naive conventional T cells, pool2 (Balb_cAJcl).CNhs13220.11817-124E82.27
CD41+ megakaryocyte cancer, donor1.CNhs13079.11774-124A12.00
CD41+ megakaryocyte cancer, donor2.CNhs13213.11776-124A31.82
CD41+ megakaryocyte cancer, donor3.CNhs13506.11778-124A50.70
CD41+ megakaryocyte control, donor1.CNhs13212.11775-124A20.63
CD41+ megakaryocyte control, donor2.CNhs13214.11777-124A40.96
CD41+ megakaryocyte control, donor3.CNhs13201.11779-124A60.85
Clontech Mouse Universal Reference Total RNA, pool1.CNhs10609.10001-101A30.94
EBF KO HPCs induced to T cell, 00hr00min, biol_rep1.CNhs11058.12972-138H22.48
EBF KO HPCs induced to T cell, 00hr00min, biol_rep2.CNhs12980.12988-138I93.92
Follicle Associated Epithelium, pool2.CNhs13211.10262-104D12.88
Follicle Associated Epithelium, pool3.CNhs13200.10263-104D22.29
GP2+ M cell, pool1.CNhs13228.11845-124H90.57
GP2+ M cell, pool2.CNhs13231.11846-124I10.43
GP2+ M cell, pool3.CNhs13240.11847-124I23.02
Ileum epithelium, pool1.CNhs13199.10252-104B91.52
Ileum epithelium, pool2.CNhs13232.10253-104C11.51
Ileum epithelium, treated with RANKL, day03, pool3.CNhs13234.10260-104C82.22
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep1.CNhs12449.13063-139I31.27
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep2.CNhs12668.13129-140G60.62
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep3.CNhs12770.13195-141E90.00
Lgr5 positive intestinal stem cells, pool1.CNhs12555.12228-129F51.16
Lgr5 positive intestinal stem cells, pool2.CNhs12556.12229-129F61.33
Lgr5 positive intestinal stem cells, pool3.CNhs12557.12230-129F72.04
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor1 (10,11,12 3LL).CNhs12539.12159-128G83.77
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor2 (0127 3LL).CNhs12198.12161-128H10.78
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor3 (0128 3LL).CNhs12542.12163-128H32.09
MC1+Gr1+ myeloid-derived suppressor cells control, donor1 (4,5,6PBS).CNhs12540.12160-128G91.18
MC1+Gr1+ myeloid-derived suppressor cells control, donor2 (0127 PBS).CNhs12541.12162-128H21.37
MC1+Gr1+ myeloid-derived suppressor cells control, donor3 (0128 PBS).CNhs12543.12164-128H43.40
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep1.CNhs11055.11484-119D83.90
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep2.CNhs11056.11485-119D93.14
Mouse Aortic Smooth Muscle cells, donor1.CNhs11297.11299-117B34.04
Mouse Astrocytes - cerebellar, donor1.CNhs13077.11708-123B70.00
Mouse Astrocytes - cerebellar, donor2.CNhs12076.11550-120C20.22
Mouse Astrocytes - hippocampus, donor1.CNhs12129.11709-123B80.22
Mouse Astrocytes - hippocampus, donor2.CNhs12077.11551-120C30.97
Mouse Astrocytes, donor2.CNhs12078.11552-120C40.14
Mouse Astrocytes, donor3.CNhs12107.11633-122C40.00
Mouse CD19+ B Cells, donor1.CNhs13531.11856-125A20.84
Mouse CD4+ T Cells, donor1.CNhs13509.11854-124I92.90
Mouse CD8+ T Cells, donor1.CNhs13511.11855-125A11.68
Mouse Cardiac Myocytes, donor1.CNhs12355.11711-123C13.60
Mouse Cardiac Myocytes, donor2.CNhs12356.11729-123E11.15
Mouse Cardiac Myocytes, donor3.CNhs12353.11634-122C51.03
Mouse Granule cells, donor1.CNhs12131.11713-123C30.00
Mouse Granule cells, donor2.CNhs12357.11731-123E30.00
Mouse Granule cells, donor3.CNhs12108.11636-122C70.00
Mouse Meningeal cells, donor1.CNhs12132.11716-123C60.00
Mouse Meningeal cells, donor3.CNhs12109.11639-122D10.00
Mouse Mesenchymal stem cells - bone marrow derived, donor1.CNhs12628.11717-123C70.00
Mouse Mesenchymal stem cells - bone marrow derived, donor2.CNhs12633.11735-123E70.00
Mouse Mesenchymal stem cells - bone marrow derived, donor3.CNhs12616.11640-122D20.00
Mouse Microglia, donor1.CNhs12629.11718-123C80.00
Mouse Microglia, donor2.CNhs12634.11736-123E80.38
Mouse Neurons - cortical, donor1.CNhs12025.11724-123D50.00
Mouse Neurons - cortical, donor2.CNhs11947.11742-123F50.14
Mouse Neurons - cortical, donor3.CNhs12112.11647-122D90.00
Mouse Neurons - dorsal spinal cord, donor2.CNhs12635.11738-123F10.57
Mouse Neurons - dorsal spinal cord, donor3.CNhs12618.11643-122D50.44
Mouse Neurons - hippocampal, donor1.CNhs12133.11721-123D20.49
Mouse Neurons - hippocampal, donor2.CNhs12359.11739-123F20.10
Mouse Neurons - hippocampal, donor3.CNhs12110.11644-122D60.00
Mouse Neurons - raphe, donor1.CNhs12631.11722-123D30.00
Mouse Neurons - raphe, donor2.CNhs12636.11740-123F30.51
Mouse Neurons - raphe, donor3.CNhs12619.11645-122D70.31
Mouse Neurons - striatal, donor1.CNhs12134.11723-123D40.79
Mouse Neurons - striatal, donor2.CNhs12360.11741-123F40.00
Mouse Neurons - striatal, donor3.CNhs12111.11646-122D80.52
Mouse Neurons - substantia nigra, donor4, tech_rep1.CNhs12612.11489-119E40.84
Mouse Neurons - substantia nigra, donor5.CNhs12614.11490-119E50.56
Mouse Neurons - substantia nigra, donor6.CNhs12643.11770-123I60.15
Mouse Neurons - ventral spinal cord, donor1.CNhs12632.11725-123D60.88
Mouse Neurons - ventral spinal cord, donor2.CNhs12638.11743-123F60.14
Mouse Neurons - ventral spinal cord, donor3.CNhs12113.11648-122E10.93
Mouse Schwann, donor1.CNhs12507.11728-123D91.51
Mouse Schwann, donor2.CNhs12573.11746-123F91.81
Mouse hepatic Sinusoidal Endothelial Cells, donor1.CNhs13209.11830-124G31.16
Mouse hepatic Stellate Cells (lipocyte), donor1.CNhs13196.11825-124F70.00
Mouse hepatocyte, donor1.CNhs13078.11714-123C40.00
Mouse hepatocyte, donor3.CNhs12615.11637-122C81.62
Mouse hepatocyte, donor6.CNhs13090.11822-124F41.30
Mouse hepatocyte, donor8.CNhs13091.11824-124F61.34
SABiosciences XpressRef Mouse Universal Total RNA, pool1.CNhs10611.10003-101A71.40
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep1 (000hC4).CNhs11939.12338-130I74.09
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep2 (000hC5).CNhs13275.12460-132E32.60
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep3 (000hC6).CNhs13324.12582-133I83.53
Sox2+ Supporting cells - organ of corti, pool1.CNhs12532.12157-128G62.39
TSt-4/DLL1 feeder cells, biol_rep1.CNhs13407.12971-138H12.57
TSt-4/DLL1 feeder cells, biol_rep2.CNhs13408.12987-138I80.00
TSt-4/DLL1 feeder cells, biol_rep3.CNhs13409.13003-139B60.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep1.CNhs13739.13367-143G14.33
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep2.CNhs13740.13368-143G27.85
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep3.CNhs13741.13369-143G37.58
Universal RNA - Mouse Normal Tissues Biochain, pool1.CNhs10613.10008-101B60.69
accessory axillary lymph node, adult.CNhs10475.1063-29H90.00
adrenal gland, adult.CNhs10508.49-24D73.41
adrenal gland, embryo E14.CNhs11038.406-44C52.78
adrenal gland, embryo E16.CNhs11004.1254-43D62.44
adrenal gland, embryo E17.CNhs11043.1263-45I11.84
adrenal gland, embryo E18.CNhs11026.1262-18F53.32
adrenal gland, neonate N00.CNhs11191.1311-23C12.00
adrenal gland, neonate N25.CNhs11223.1377-27I31.51
amnion, adult pregnant day17.5.CNhs10488.583-22A82.97
aorta, adult.CNhs10498.46-23H12.31
bone (os femoris), adult.CNhs10483.56-12G20.88
bone (os femoris), neonate N02.CNhs11227.1985-43F51.46
bone (os femoris), neonate N16.CNhs11225.1525-43A60.88
bone (os femoris), neonate N20.CNhs11195.1350-25C30.48
cecum, adult.CNhs10467.37-13H41.86
cerebellum, adult.CNhs10494.15-8B20.88
cerebellum, neonate N30.CNhs11135.1395-42I20.42
colon, adult.CNhs10468.36-18H71.28
common myeloid progenitor CMP, biol_rep1.CNhs12550.12122-128C72.04
common myeloid progenitor CMP, biol_rep2.CNhs12203.12125-128D12.40
common myeloid progenitor CMP, biol_rep3.CNhs12551.12128-128D41.14
corpora quadrigemina, adult.CNhs10501.16-22A41.20
corpus striatum, adult.CNhs10487.19-21D80.46
corpus striatum, neonate N00.CNhs11226.630-43F10.88
cortex, adult.CNhs10473.12-14D50.52
cortex, neonate N30.CNhs11107.1392-42F20.26
diencephalon, adult.CNhs10482.20-12F20.83
diencephalon, neonate N30.CNhs11201.1388-42B20.32
epididymis and seminiferous tubule, neonate N00.CNhs11218.1310-23B11.02
epididymis and seminiferous tubule, neonate N30.CNhs11199.1387-42A21.12
epididymis, adult.CNhs10490.58-23B22.53
eyeball, adult.CNhs10484.31-12G41.89
eyeball, embryo E12.CNhs11016.345-16C62.21
eyeball, embryo E14.CNhs10521.399-16E21.15
eyeball, embryo E15.CNhs10593.426-16C91.44
eyeball, embryo E17.CNhs11023.1261-18D40.75
eyeball, neonate N00.CNhs11207.633-15C61.16
eyeball, neonate N01.CNhs11140.1532-43E71.28
eyeball, neonate N02.CNhs11205.1551-44G80.75
eyeball, neonate N16.CNhs11188.777-19A20.78
forelimb, embryo E11.CNhs10596.335-25E24.31
forelimb, embryo E12.CNhs10600.359-14H21.32
forelimb, embryo E13.CNhs10589.384-1E23.52
forelimb, embryo E14.CNhs10577.413-26A82.85
forelimb, embryo E15.CNhs11007.437-20E71.95
forelimb, embryo E17.CNhs10598.1517-43C41.39
forelimb, embryo E18.CNhs11008.1520-43B52.47
gonad, embryo E13.CNhs11044.1564-45I62.59
granulocyte macrophage progenitor GMP, biol_rep1.CNhs12206.12123-128C80.00
granulocyte macrophage progenitor GMP, biol_rep2.CNhs12202.12126-128D21.29
granulocyte macrophage progenitor GMP, biol_rep3.CNhs11928.12129-128D51.14
heart, embryo E11.CNhs10586.331-24E92.07
heart, embryo E12.CNhs11015.353-12F53.99
heart, embryo E13.CNhs11013.376-3I92.34
heart, embryo E14.CNhs10597.403-26D41.42
heart, embryo E15.CNhs11017.431-16C81.38
heart, embryo E16.CNhs11021.457-17C61.70
heart, embryo E17.CNhs11025.479-18E50.47
heart, embryo E18.CNhs11030.1283-20G31.34
heart, neonate N00.CNhs11213.639-21E31.05
heart, neonate N03.CNhs11221.1349-25I21.48
heart, neonate N10.CNhs11118.749-24G11.97
heart, neonate N16.CNhs11209.782-15G10.97
heart, neonate N20.CNhs11127.821-26I60.88
heart, neonate N25.CNhs11196.1351-25D30.88
heart, neonate N30.CNhs11202.1390-42D21.88
hippocampus, adult.CNhs10478.13-16E80.21
hippocampus, neonate N00.CNhs11228.627-43G10.51
intestinal mucosa, adult.CNhs10506.860-29I32.31
intestine, adult.CNhs10496.178-9A30.53
intestine, embryo E12.CNhs11019.1251-16I54.69
intestine, embryo E13.CNhs11010.381-16D51.39
intestine, embryo E15.CNhs10602.976-16D81.29
intestine, embryo E16.CNhs10585.463-22H41.01
intestine, embryo E17.CNhs10582.482-18D30.44
intestine, embryo E18.CNhs10526.1289-20F71.52
intestine, neonate N00.CNhs11126.644-26D11.90
intestine, neonate N01.CNhs11192.1322-23E90.82
intestine, neonate N06.CNhs11102.688-20B81.51
intestine, neonate N07.CNhs11095.720-20F21.79
intestine, neonate N10.CNhs11098.755-23A51.17
intestine, neonate N20.CNhs11187.827-18D11.80
intestine, neonate N25.CNhs11121.1352-25E31.73
intestine, neonate N30.CNhs11131.1384-42G11.19
kidney, embryo E14.CNhs10606.411-4I90.95
kidney, embryo E15.CNhs10997.434-16F81.71
kidney, embryo E16.CNhs10584.464-22A51.13
kidney, embryo E17.CNhs11028.483-18I22.44
kidney, embryo E18.CNhs11001.1288-20C71.55
kidney, neonate N00.CNhs11214.646-21G71.40
kidney, neonate N10.CNhs11206.758-6D51.71
kidney, neonate N20.CNhs11113.832-19I11.18
kidney, neonate N25.CNhs11122.1353-25F31.26
kidney, neonate N30.CNhs11203.1385-42H11.48
liver, adult pregnant day01.CNhs10466.508-5B21.48
liver, embryo E12.CNhs10601.355-15F81.17
liver, embryo E13.CNhs10524.378-3H60.98
liver, embryo E14.CNhs10594.409-16E10.67
liver, embryo E15.CNhs10520.433-16D71.22
liver, embryo E16.CNhs10523.462-17F50.96
liver, embryo E17.CNhs10510.481-18A32.55
liver, embryo E18.CNhs10579.499-43G42.30
liver, neonate N00.CNhs11117.641-24F41.13
liver, neonate N03.CNhs11123.1345-25G22.75
liver, neonate N06.CNhs11101.684-20A810.06
liver, neonate N07.CNhs11103.716-20H23.72
liver, neonate N10.CNhs11115.751-24B93.12
liver, neonate N20.CNhs11220.823-25A31.77
liver, neonate N25.CNhs11198.1368-26H13.23
liver, neonate N30.CNhs11106.1382-42D12.89
lung, adult.CNhs10474.28-22B13.88
lung, embryo E12.CNhs10522.354-16G23.03
lung, embryo E14.CNhs10604.404-26F84.24
lung, embryo E15.CNhs11020.432-17C53.56
lung, embryo E16.CNhs10998.458-17B64.22
lung, embryo E17.CNhs10605.480-44A66.37
lung, embryo E18.CNhs10583.1287-20I66.90
lung, neonate N00.CNhs11224.640-42C67.42
lung, neonate N06.CNhs11212.683-20E53.47
lung, neonate N07.CNhs11111.715-19A34.65
lung, neonate N10.CNhs11219.750-23E63.67
lung, neonate N20.CNhs11109.822-18A44.26
lung, neonate N25.CNhs11119.1359-25C73.28
lung, neonate N30.CNhs11133.1394-42H23.33
macrophage, bone marrow derived, pool1.CNhs11457.3560-170A10.00
macrophage, bone marrow derived, pool2.CNhs11532.3632-171A11.09
mammary gland, adult lactating day02.CNhs10480.595-22B66.88
mammary gland, adult pregnant day19.CNhs10476.588-5H24.14
medulla oblongata, adult.CNhs10477.17-12C20.96
medulla oblongata, neonate N30.CNhs11200.1396-42A30.94
mouse fibroblast cell line: CRL-1658 NIH/3T3.CNhs11093.1830-49C71.48
muscle (biceps femoris), neonate N30.CNhs11129.1389-42C20.76
neurospheres - enteric neuron derived, biol_rep1.CNhs13087.11810-124E11.26
neurospheres - enteric neuron derived, biol_rep2.CNhs13088.11811-124E21.95
neurospheres - enteric neuron derived, biol_rep3.CNhs13089.11812-124E31.94
neurospheres - parasympathetic neuron derived, biol_rep1.CNhs13084.11807-124D70.96
neurospheres - parasympathetic neuron derived, biol_rep2.CNhs13085.11808-124D80.67
neurospheres - parasympathetic neuron derived, biol_rep3.CNhs13086.11809-124D91.13
neurospheres - sympathetic neuron derived, biol_rep1.CNhs13081.11804-124D42.02
neurospheres - sympathetic neuron derived, biol_rep2.CNhs13082.11805-124D50.88
neurospheres - sympathetic neuron derived, biol_rep3.CNhs13083.11806-124D61.58
olfactory brain, adult.CNhs10489.18-22I90.64
ovary, adult.CNhs10507.91-2I72.55
ovary, embryo E18.CNhs11040.505-44H71.25
ovary, neonate N00.CNhs11217.1299-22I41.63
oviduct, adult pregnant day01.CNhs10500.988-6G62.97
pancreas, adult.CNhs10486.34-16E42.65
pancreas, embryo E14.CNhs11012.405-44F42.19
pancreas, embryo E15.CNhs11042.1556-45F21.81
pancreas, embryo E16.CNhs11003.460-26E51.32
pancreas, embryo E17.CNhs10599.1558-45G32.07
pancreas, embryo E18.CNhs10580.1535-43I72.46
pancreas, neonate N00.CNhs11105.645-26G92.33
pancreas, neonate N01.CNhs11138.1531-43D75.45
pancreas, neonate N02.CNhs11139.1539-43D82.50
pancreas, neonate N16.CNhs11136.787-43B63.16
pancreas, neonate N25.CNhs11094.1555-45E23.16
pancreas, neonate N30.CNhs11182.1548-44H50.00
pituitary gland, adult.CNhs10493.21-1G82.38
pituitary gland, embryo E12.CNhs11018.346-16E63.06
pituitary gland, embryo E13.CNhs11009.370-44C71.81
pituitary gland, embryo E14.CNhs11037.398-44A51.29
pituitary gland, embryo E15.CNhs10592.427-16B93.19
pituitary gland, embryo E16.CNhs11036.449-43F62.14
pituitary gland, embryo E17.CNhs11039.1265-44F53.29
pituitary gland, neonate N00.CNhs11190.1308-22E91.52
placenta, adult pregnant day10.CNhs10472.539-13I74.46
placenta, adult pregnant day17.CNhs10464.577-18G34.02
prostate, adult.CNhs10470.859-1F83.53
skin, adult.CNhs10492.30-1C30.99
skin, neonate N00.CNhs11124.650-25G41.45
skin, neonate N03.CNhs11215.662-22H32.23
skin, neonate N06.CNhs11097.693-20I52.75
skin, neonate N10.CNhs11108.762-6C42.46
small intestine, neonate N16.CNhs11114.790-21I11.46
spinal cord, adult.CNhs10505.24-13C90.74
spleen, adult.CNhs10465.25-2G22.73
spleen, embryo E16.CNhs11035.461-43C11.65
spleen, embryo E18.CNhs11011.1271-21F22.41
spleen, neonate N10.CNhs11116.752-24D11.70
spleen, neonate N20.CNhs11112.824-19H11.50
spleen, neonate N25.CNhs11099.1354-25G31.37
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep1.CNhs12534.12121-128C61.53
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep2.CNhs12535.12124-128C91.82
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep3.CNhs12536.12127-128D31.80
stomach, adult.CNhs10503.33-1H61.91
stomach, embryo E12.CNhs10588.356-43E31.74
stomach, embryo E15.CNhs10603.1252-16G81.63
stomach, embryo E16.CNhs11022.459-17D41.51
stomach, embryo E17.CNhs11006.1035-18D52.09
stomach, embryo E18.CNhs10999.1286-20C63.93
stomach, neonate N03.CNhs11193.1340-24B82.43
stomach, neonate N07.CNhs11210.718-18A92.31
stomach, neonate N25.CNhs11104.1355-25E41.05
stomach, neonate N30.CNhs11134.1386-42I11.81
submandibular gland, adult.CNhs10469.59-29C11.24
testis, adult.CNhs10504.57-7G50.56
testis, embryo E13.CNhs11031.389-23F52.24
testis, embryo E15.CNhs11034.443-27C51.49
testis, embryo E16.CNhs11033.470-26G50.78
testis, embryo E17.CNhs11029.486-18I51.29
testis, embryo E18.CNhs11027.503-18G50.84
testis, neonate N00.CNhs11189.1300-22B71.06
testis, neonate N07.CNhs11222.726-26I42.08
testis, neonate N10.CNhs11204.763-44D93.36
testis, neonate N20.CNhs11110.839-18H31.21
testis, neonate N30.CNhs11130.1391-42E21.15
thymus, adult.CNhs10471.38-12B52.84
thymus, embryo E14.CNhs11041.402-44I42.43
thymus, embryo E15.CNhs11005.430-45I21.23
thymus, embryo E16.CNhs11002.456-26C51.30
thymus, embryo E17.CNhs10581.478-18C11.97
thymus, embryo E18.CNhs10595.1273-19G41.19
thymus, neonate N02.CNhs11181.1541-43F81.92
thymus, neonate N03.CNhs11137.2104-43C72.51
thymus, neonate N06.CNhs11197.681-26C42.32
thymus, neonate N07.CNhs11211.713-19D31.60
thymus, neonate N10.CNhs11194.748-24E42.12
thymus, neonate N20.CNhs11186.820-7A22.44
thymus, neonate N25.CNhs11125.1362-25G72.31
thymus, neonate N30.CNhs11132.1393-42G22.45
tongue, adult.CNhs10499.32-1B41.81
trophoblast stem cell line B1 differentiation, day00, biol_rep1.CNhs13526.13297-142H30.89
trophoblast stem cell line R1AB differentiation, day00, biol_rep1.CNhs13481.13283-142F72.42
trophoblast stem cell line Rybp differentiation, day00, biol_rep1.CNhs13519.13290-142G53.69
urinary bladder, adult.CNhs10481.879-12E41.74
uterus, adult pregnant day19.CNhs10497.590-15F52.06
uterus, adult.CNhs10509.92-27E52.01
vagina, adult.CNhs10502.89-27D52.14
vesicular gland, adult.CNhs10491.51-27F83.01
visual cortex - wildtype, neonate N15, donor1.CNhs13031.10235-104A10.00
visual cortex - wildtype, neonate N15, donor2.CNhs13032.10236-104A20.46
visual cortex - wildtype, neonate N15, donor3.CNhs13033.10237-104A31.15
visual cortex - wildtype, neonate N15, donor5.CNhs13820.10349-105D70.34
visual cortex - wildtype, neonate N30, donor1.CNhs13034.10238-104A40.00
visual cortex - wildtype, neonate N30, donor2.CNhs13035.10239-104A50.76
visual cortex - wildtype, neonate N30, donor3.CNhs13036.10240-104A60.00
visual cortex - wildtype, neonate N60-70, donor1.CNhs13037.10241-104A70.00
visual cortex - wildtype, neonate N60-70, donor2.CNhs13038.10242-104A80.00
visual cortex - wildtype, neonate N60-70, donor3.CNhs13039.10243-104A90.00
whole body, embryo E11.CNhs11014.324-5I81.97
whole body, embryo E12.CNhs10587.857-27C91.60
whole body, embryo E13.CNhs10512.372-23H22.56
whole body, embryo E14.5.CNhs10578.420-27D21.22
whole body, embryo E14.CNhs10519.395-14B13.56
whole body, embryo E16.CNhs10514.453-14F21.29
whole body, embryo E17.5, pool1 (internal control).CNhs10479.3139-67G51.56
whole body, embryo E17.5, pool1 (internal control).CNhs10495.3139-67G51.65
whole body, embryo E17.5, pool1 (internal control).CNhs10511.3139-67G52.25
whole body, embryo E17.5, pool1 (internal control).CNhs10527.3139-67G51.52
whole body, embryo E17.5, pool1 (internal control).CNhs10591.3139-67G51.01
whole body, embryo E17.5, pool1 (internal control).CNhs10607.3139-67G51.13
whole body, embryo E17.5, pool1 (internal control).CNhs10623.3139-67G51.12
whole body, embryo E17.5, pool1 (internal control).CNhs10639.3139-67G51.66
whole body, embryo E17.5, pool1 (internal control).CNhs10655.3139-67G51.44
whole body, embryo E17.5, pool1 (internal control).CNhs10725.3139-67G52.86
whole body, embryo E17.5, pool1 (internal control).CNhs10749.3139-67G51.62
whole body, embryo E17.5, pool1 (internal control).CNhs10840.3139-67G51.74
whole body, embryo E17.5, pool1 (internal control).CNhs10856.3139-67G51.24
whole body, embryo E17.5, pool1 (internal control).CNhs10880.3139-67G51.77
whole body, embryo E17.5, pool1 (internal control).CNhs11000.3139-67G51.03
whole body, embryo E17.5, pool1 (internal control).CNhs11024.3139-67G52.84
whole body, embryo E17.5, pool1 (internal control).CNhs11032.3139-67G51.43
whole body, embryo E17.5, pool1 (internal control).CNhs11048.3139-67G51.89
whole body, embryo E17.5, pool1 (internal control).CNhs11072.3139-67G51.69
whole body, embryo E17.5, pool1 (internal control).CNhs11080.3139-67G51.95
whole body, embryo E17.5, pool1 (internal control).CNhs11096.3139-67G51.83
whole body, embryo E17.5, pool1 (internal control).CNhs11120.3139-67G51.58
whole body, embryo E17.5, pool1 (internal control).CNhs11128.3139-67G52.31
whole body, embryo E17.5, pool1 (internal control).CNhs11184.3139-67G52.24
whole body, embryo E17.5, pool1 (internal control).CNhs11208.3139-67G51.30
whole body, embryo E17.5, pool1 (internal control).CNhs11216.3139-67G51.38
whole body, embryo E17.5, pool1 (internal control).CNhs11246.3139-67G50.82
whole body, embryo E17.5, pool1 (internal control).CNhs11278.3139-67G51.70
whole body, embryo E17.5.CNhs10513.490-9F91.93
whole body, embryo E17.CNhs10517.475-3I51.50
whole body, embryo E18.CNhs10516.493-3B32.11
whole body, neonate N00.CNhs10525.657-19C21.93
whole body, neonate N01.CNhs10576.659-23C61.53
whole body, neonate N06.CNhs10515.692-21D11.76
whole body, neonate N10.CNhs10518.761-6B40.93





  • Click each plot point to find sample in table


Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data

Uber anatomy
Ontology termp-valuen
thoracic cavity element1.89e-1117
thoracic segment organ1.89e-1117
thoracic cavity1.89e-1117
thoracic segment of trunk1.89e-1117
respiratory primordium1.89e-1117
endoderm of foregut1.89e-1117
epithelial bud3.45e-1117
trunk1.97e-1090
epithelial fold3.03e-1020
respiratory tract1.80e-0941
lung2.22e-0914
respiratory tube2.22e-0914
respiration organ2.22e-0914
pair of lungs2.22e-0914
lung primordium2.22e-0914
lung bud2.22e-0914
respiratory system3.95e-0942
trunk region element1.15e-0879
endoderm-derived structure1.25e-08118
endoderm1.25e-08118
presumptive endoderm1.25e-08118
foregut2.31e-0880
digestive system7.89e-08116
digestive tract7.89e-08116
primitive gut7.89e-08116
subdivision of digestive tract2.24e-07114
subdivision of trunk7.87e-0766







Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process. Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process. Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.

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