FFCP PHASE1:Mm9::chr6:113604364..113604388,+: Difference between revisions
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{{FFCP | {{FFCP|EntrezGene=NA|HGNC=|MCL_coexpression_id=6|UniProt=NA|association_with_transcript=NA|description=CAGE_peak_at_chr6:113604364..113604388,+|id=chr6:113604364..113604388,+|ontology_enrichment_celltype=CL:0000049!6.30e-14!19;CL:0000988!7.38e-08!32;CL:0002032!7.38e-08!32;CL:0000037!7.38e-08!32;CL:0000566!7.38e-08!32;CL:0000837!7.38e-08!32;CL:0000034!9.45e-07!97|ontology_enrichment_celltype_v019_2=CL:0000557,4.26e-09,7;CL:0000049,8.46e-09,19;CL:0000355,1.97e-07,9|ontology_enrichment_disease=DOID:0060100!1.30e-14!3;DOID:4045!1.30e-14!3;DOID:0050686!1.52e-07!6|ontology_enrichment_disease_v019_2=DOID:0060100,3.91e-21,3;DOID:4045,3.91e-21,3;DOID:0050686,6.96e-11,6|ontology_enrichment_uberon=UBERON:0002204!5.98e-08!32|ontology_enrichment_uberon_v019_2=UBERON:0001134,1.97e-07,9;UBERON:0002036,1.97e-07,9;UBERON:0002385,1.97e-07,9;UBERON:0000486,1.97e-07,9;UBERON:0007503,1.97e-07,9;UBERON:0001015,1.97e-07,9;UBERON:0002329,1.97e-07,9;UBERON:0003082,1.97e-07,9;UBERON:0003059,1.97e-07,9;UBERON:0007282,1.97e-07,9;UBERON:0004290,1.97e-07,9;UBERON:0009618,1.97e-07,9;UBERON:0002204,2.65e-07,32;UBERON:0000383,9.75e-07,10|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.202475267389826,0,0,0.137114433605739,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.51118978442145,3.906676722619,2.09409497589519,20.5881020810855,13.6609096991689,7.76816564849846,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.958520996047362,2.99951365496704,1.77898317902291,0.149790639404823,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.80885274925294,1.28673953557358,1.42081749697796,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.275936746304732,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.69978429993855,1.39951452323658,0.414599921413271,0,0,0,0,0,0,0,0.0826534557253359,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0|short_description=p@chr6:113604364..113604388,+}} | ||
|EntrezGene=NA | |||
|HGNC= | |||
|MCL_coexpression_id=6 | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|description=CAGE_peak_at_chr6:113604364..113604388,+ | |||
|id=chr6:113604364..113604388,+ | |||
|ontology_enrichment_celltype=CL:0000049!6.30e-14!19;CL:0000988!7.38e-08!32;CL:0002032!7.38e-08!32;CL:0000037!7.38e-08!32;CL:0000566!7.38e-08!32;CL:0000837!7.38e-08!32;CL:0000034!9.45e-07!97 | |||
|ontology_enrichment_celltype_v019_2=CL:0000557,4.26e-09,7;CL:0000049,8.46e-09,19;CL:0000355,1.97e-07,9 | |||
|ontology_enrichment_disease=DOID:0060100!1.30e-14!3;DOID:4045!1.30e-14!3;DOID:0050686!1.52e-07!6 | |||
|ontology_enrichment_disease_v019_2=DOID:0060100,3.91e-21,3;DOID:4045,3.91e-21,3;DOID:0050686,6.96e-11,6 | |||
|ontology_enrichment_uberon=UBERON:0002204!5.98e-08!32 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001134,1.97e-07,9;UBERON:0002036,1.97e-07,9;UBERON:0002385,1.97e-07,9;UBERON:0000486,1.97e-07,9;UBERON:0007503,1.97e-07,9;UBERON:0001015,1.97e-07,9;UBERON:0002329,1.97e-07,9;UBERON:0003082,1.97e-07,9;UBERON:0003059,1.97e-07,9;UBERON:0007282,1.97e-07,9;UBERON:0004290,1.97e-07,9;UBERON:0009618,1.97e-07,9;UBERON:0002204,2.65e-07,32;UBERON:0000383,9.75e-07,10 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.202475267389826,0,0,0.137114433605739,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.51118978442145,3.906676722619,2.09409497589519,20.5881020810855,13.6609096991689,7.76816564849846,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.958520996047362,2.99951365496704,1.77898317902291,0.149790639404823,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.80885274925294,1.28673953557358,1.42081749697796,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.275936746304732,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.69978429993855,1.39951452323658,0.414599921413271,0,0,0,0,0,0,0,0.0826534557253359,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | |||
|short_description=p@chr6:113604364..113604388,+ | |||
}} |
Revision as of 08:33, 14 September 2013
Short description: | p@chr6:113604364..113604388, + |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr6:113604364..113604388, + |
Coexpression cluster: | MCL_coexpression_mm9:6 |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
granulocyte monocyte progenitor cell | 4.26e-09 | 7 |
common myeloid progenitor | 8.46e-09 | 19 |
multi-potent skeletal muscle stem cell | 1.97e-07 | 9 |
Ontology term | p-value | n |
---|---|---|
skeletal muscle tissue | 1.97e-07 | 9 |
striated muscle tissue | 1.97e-07 | 9 |
muscle tissue | 1.97e-07 | 9 |
multilaminar epithelium | 1.97e-07 | 9 |
epithelial vesicle | 1.97e-07 | 9 |
musculature | 1.97e-07 | 9 |
somite | 1.97e-07 | 9 |
myotome | 1.97e-07 | 9 |
presomitic mesoderm | 1.97e-07 | 9 |
presumptive segmental plate | 1.97e-07 | 9 |
dermomyotome | 1.97e-07 | 9 |
trunk paraxial mesoderm | 1.97e-07 | 9 |
musculoskeletal system | 2.65e-07 | 32 |
musculature of body | 9.75e-07 | 10 |
Ontology term | p-value | n |
---|---|---|
musculoskeletal system cancer | 3.91e-21 | 3 |
muscle cancer | 3.91e-21 | 3 |
organ system cancer | 6.96e-11 | 6 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.