FFCP PHASE1:Mm9::chr6:129187277..129187288,+: Difference between revisions
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{{FFCP | {{FFCP|EntrezGene=NA|HGNC=|MCL_coexpression_id=233|UniProt=NA|association_with_transcript=NA|description=CAGE_peak_at_chr6:129187277..129187288,+|id=chr6:129187277..129187288,+|ontology_enrichment_celltype=CL:0000084!2.75e-10!11;CL:0000827!2.75e-10!11;CL:0000838!3.42e-09!12;CL:0000791!1.20e-08!9;CL:0000789!1.20e-08!9;CL:0002420!1.20e-08!9;CL:0002419!1.20e-08!9;CL:0000790!1.20e-08!9;CL:0000542!2.86e-08!13;CL:0000051!2.86e-08!13;CL:0000893!5.58e-08!6;CL:0002489!5.58e-08!6;CL:0000898!5.58e-08!6;CL:0000809!5.58e-08!6;CL:0000810!5.58e-08!6;CL:0000895!5.58e-08!6;CL:0000808!5.58e-08!6;CL:0000894!5.58e-08!6;CL:0000806!5.58e-08!6;CL:0000807!5.58e-08!6;CL:0000805!5.58e-08!6;CL:0002425!5.58e-08!6;CL:0002436!5.58e-08!6;CL:0002427!5.58e-08!6;CL:0002428!5.58e-08!6;CL:0002429!5.58e-08!6;CL:0002433!5.58e-08!6;CL:0002431!5.58e-08!6;CL:0002432!5.58e-08!6;CL:0000624!9.80e-08!8;CL:0000738!3.89e-07!17;CL:0002087!3.89e-07!17;CL:0002031!7.86e-07!25|ontology_enrichment_celltype_v019_2=CL:0000893,1.71e-17,6;CL:0002489,1.71e-17,6;CL:0000898,1.71e-17,6;CL:0000809,1.71e-17,6;CL:0000810,1.71e-17,6;CL:0000895,1.71e-17,6;CL:0000808,1.71e-17,6;CL:0000894,1.71e-17,6;CL:0000806,1.71e-17,6;CL:0000807,1.71e-17,6;CL:0000805,1.71e-17,6;CL:0002425,1.71e-17,6;CL:0002436,1.71e-17,6;CL:0002427,1.71e-17,6;CL:0002428,1.71e-17,6;CL:0002429,1.71e-17,6;CL:0002433,1.71e-17,6;CL:0002431,1.71e-17,6;CL:0002432,1.71e-17,6;CL:0000624,3.42e-13,8;CL:0000791,9.36e-12,9;CL:0000789,9.36e-12,9;CL:0002420,9.36e-12,9;CL:0002419,9.36e-12,9;CL:0000790,9.36e-12,9;CL:0000084,1.17e-09,11;CL:0000827,1.17e-09,11;CL:0000738,2.39e-09,17;CL:0002087,2.39e-09,17;CL:0000838,7.17e-09,12;CL:0000542,3.34e-08,13;CL:0000051,3.34e-08,13|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=DOID:0060100,2.90e-09,3;DOID:4045,2.90e-09,3|ontology_enrichment_uberon=UBERON:0006562!4.04e-13!24;UBERON:0001557!4.04e-13!24;UBERON:0001042!4.04e-13!24;UBERON:0008814!4.04e-13!24;UBERON:0009145!4.04e-13!24;UBERON:0004177!1.64e-12!29;UBERON:0002370!2.25e-12!23;UBERON:0000974!2.25e-12!23;UBERON:0004807!2.25e-12!23;UBERON:0005058!2.25e-12!23;UBERON:0003351!2.25e-12!23;UBERON:0009113!2.25e-12!23;UBERON:0003295!2.25e-12!23;UBERON:0009722!2.25e-12!23;UBERON:0005562!2.25e-12!23;UBERON:0007690!2.25e-12!23;UBERON:0002193!5.83e-12!48;UBERON:0003408!1.25e-11!24;UBERON:0000072!5.06e-11!27;UBERON:0000065!5.45e-11!41;UBERON:0002390!5.64e-11!45;UBERON:0003061!5.64e-11!45;UBERON:0001004!1.48e-10!42;UBERON:0000063!2.85e-07!35;UBERON:0002405!3.75e-07!70|ontology_enrichment_uberon_v019_2=UBERON:0002370,1.11e-09,23;UBERON:0000974,1.11e-09,23;UBERON:0004807,1.11e-09,23;UBERON:0005058,1.11e-09,23;UBERON:0003351,1.11e-09,23;UBERON:0009113,1.11e-09,23;UBERON:0003295,1.11e-09,23;UBERON:0009722,1.11e-09,23;UBERON:0005562,1.11e-09,23;UBERON:0007690,1.11e-09,23;UBERON:0006562,2.90e-09,24;UBERON:0003408,2.90e-09,24;UBERON:0001557,2.90e-09,24;UBERON:0001042,2.90e-09,24;UBERON:0008814,2.90e-09,24;UBERON:0009145,2.90e-09,24;UBERON:0000072,3.39e-08,27;UBERON:0000029,9.86e-08,1;UBERON:0001097,9.86e-08,1;UBERON:0003968,9.86e-08,1;UBERON:0001467,9.86e-08,1;UBERON:0002193,1.08e-07,48;UBERON:0002405,1.08e-07,48;UBERON:0004177,1.32e-07,29;UBERON:0005057,1.32e-07,29|phase1_expression=0,0,0,0,0,0.33575854382378,0,0.774739940649458,5.06839399746,4.68129052643987,2.05461561870606,1.19658238493005,0.171200729931206,0.34968160967599,0,0.202475267389826,0,0.630924330716475,0.411343300817216,0,0.0850432901510698,0.297872853602656,0.261199789138935,0.159992422793407,0,0,0,0,0.190023419456374,0.504060259519861,0.221730510655305,0,0,0,0.577703239502549,0,0,0.418531630736908,3.1253413780952,1.0470474879476,4.70585190424811,1.36609096991689,2.42755176515577,0.125896817975577,0.101376931219515,0,0,0,0,0,0,0,0,0,0.336093799142464,0,0,0,0,0,0,0,0,0,0,0.7104801149461,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.280888840263504,0,0,0,0,0,0,0,0,0,0,0.11418387971906,2.07150306917737,0,0,0,0,0,0,0,0,0,0.884610551949874,0,0.220841518460394,0,0,0,0,0,0.11981512450592,0,0,0.149790639404823,0,0,0,0,0,0,0,0.124406970610093,0,0,0,0,0,0,0,0,0,0,0,0,0,0.219195732427575,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.268273401399619,0,0,0,0,0,0,0,0,0,0.330418782983798,0.264450566663544,0,0,0,0,0,0,0,0,0,0,0,0,0.864552199498777,0.398282546508734,0,0,0,0,0,0,0,0,0,0.246794327843601,0,0,0,0,0,0,0,0,0,0,0,0,0,0.252578877947112,0,0.482443521363367,0.184753190166605,0,0,0,0,0,0.476087281772027,0,0,0,0.159454768657487,0.327726629431476,0.172684981865896,0.433947175744535,0,1.08781136763742,0,0.275936746304732,0,0,0.163934945376675,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.164970122972535,0,0,0.302323556964751,0,0,0,0,0,0,0,1.05418608574999,0,0,0,0,0.214337035031592,0,0,0.164549020602121,0,0,0.21183207086382,0.220528398054962,0.32977250588296,0,0.120625849856312,0,0,0,0,0,0,0.185194527369712,0.376736914009382,0,0.228778173206523,0.169978429993855,0,0,0,0,0,0,0,0,0,0.0826534557253359,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.26404448251271,0,0.102710957164827,0,0.179026695667481,0.39736270956253,0.120195449519969,0.295379054349154,0.201932899896295,0.0762068066549998,0.504130925684203,0.194915761479505,1.25075394132428,0.467507608726276,0.226730383615211,0,0,0,0,0,0.36630324853453,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.183843508450014,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0846146078916765,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0|short_description=p@chr6:129187277..129187288,+}} | ||
|EntrezGene=NA | |||
|HGNC= | |||
|MCL_coexpression_id=233 | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|description=CAGE_peak_at_chr6:129187277..129187288,+ | |||
|id=chr6:129187277..129187288,+ | |||
|ontology_enrichment_celltype=CL:0000084!2.75e-10!11;CL:0000827!2.75e-10!11;CL:0000838!3.42e-09!12;CL:0000791!1.20e-08!9;CL:0000789!1.20e-08!9;CL:0002420!1.20e-08!9;CL:0002419!1.20e-08!9;CL:0000790!1.20e-08!9;CL:0000542!2.86e-08!13;CL:0000051!2.86e-08!13;CL:0000893!5.58e-08!6;CL:0002489!5.58e-08!6;CL:0000898!5.58e-08!6;CL:0000809!5.58e-08!6;CL:0000810!5.58e-08!6;CL:0000895!5.58e-08!6;CL:0000808!5.58e-08!6;CL:0000894!5.58e-08!6;CL:0000806!5.58e-08!6;CL:0000807!5.58e-08!6;CL:0000805!5.58e-08!6;CL:0002425!5.58e-08!6;CL:0002436!5.58e-08!6;CL:0002427!5.58e-08!6;CL:0002428!5.58e-08!6;CL:0002429!5.58e-08!6;CL:0002433!5.58e-08!6;CL:0002431!5.58e-08!6;CL:0002432!5.58e-08!6;CL:0000624!9.80e-08!8;CL:0000738!3.89e-07!17;CL:0002087!3.89e-07!17;CL:0002031!7.86e-07!25 | |||
|ontology_enrichment_celltype_v019_2=CL:0000893,1.71e-17,6;CL:0002489,1.71e-17,6;CL:0000898,1.71e-17,6;CL:0000809,1.71e-17,6;CL:0000810,1.71e-17,6;CL:0000895,1.71e-17,6;CL:0000808,1.71e-17,6;CL:0000894,1.71e-17,6;CL:0000806,1.71e-17,6;CL:0000807,1.71e-17,6;CL:0000805,1.71e-17,6;CL:0002425,1.71e-17,6;CL:0002436,1.71e-17,6;CL:0002427,1.71e-17,6;CL:0002428,1.71e-17,6;CL:0002429,1.71e-17,6;CL:0002433,1.71e-17,6;CL:0002431,1.71e-17,6;CL:0002432,1.71e-17,6;CL:0000624,3.42e-13,8;CL:0000791,9.36e-12,9;CL:0000789,9.36e-12,9;CL:0002420,9.36e-12,9;CL:0002419,9.36e-12,9;CL:0000790,9.36e-12,9;CL:0000084,1.17e-09,11;CL:0000827,1.17e-09,11;CL:0000738,2.39e-09,17;CL:0002087,2.39e-09,17;CL:0000838,7.17e-09,12;CL:0000542,3.34e-08,13;CL:0000051,3.34e-08,13 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2=DOID:0060100,2.90e-09,3;DOID:4045,2.90e-09,3 | |||
|ontology_enrichment_uberon=UBERON:0006562!4.04e-13!24;UBERON:0001557!4.04e-13!24;UBERON:0001042!4.04e-13!24;UBERON:0008814!4.04e-13!24;UBERON:0009145!4.04e-13!24;UBERON:0004177!1.64e-12!29;UBERON:0002370!2.25e-12!23;UBERON:0000974!2.25e-12!23;UBERON:0004807!2.25e-12!23;UBERON:0005058!2.25e-12!23;UBERON:0003351!2.25e-12!23;UBERON:0009113!2.25e-12!23;UBERON:0003295!2.25e-12!23;UBERON:0009722!2.25e-12!23;UBERON:0005562!2.25e-12!23;UBERON:0007690!2.25e-12!23;UBERON:0002193!5.83e-12!48;UBERON:0003408!1.25e-11!24;UBERON:0000072!5.06e-11!27;UBERON:0000065!5.45e-11!41;UBERON:0002390!5.64e-11!45;UBERON:0003061!5.64e-11!45;UBERON:0001004!1.48e-10!42;UBERON:0000063!2.85e-07!35;UBERON:0002405!3.75e-07!70 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002370,1.11e-09,23;UBERON:0000974,1.11e-09,23;UBERON:0004807,1.11e-09,23;UBERON:0005058,1.11e-09,23;UBERON:0003351,1.11e-09,23;UBERON:0009113,1.11e-09,23;UBERON:0003295,1.11e-09,23;UBERON:0009722,1.11e-09,23;UBERON:0005562,1.11e-09,23;UBERON:0007690,1.11e-09,23;UBERON:0006562,2.90e-09,24;UBERON:0003408,2.90e-09,24;UBERON:0001557,2.90e-09,24;UBERON:0001042,2.90e-09,24;UBERON:0008814,2.90e-09,24;UBERON:0009145,2.90e-09,24;UBERON:0000072,3.39e-08,27;UBERON:0000029,9.86e-08,1;UBERON:0001097,9.86e-08,1;UBERON:0003968,9.86e-08,1;UBERON:0001467,9.86e-08,1;UBERON:0002193,1.08e-07,48;UBERON:0002405,1.08e-07,48;UBERON:0004177,1.32e-07,29;UBERON:0005057,1.32e-07,29 | |||
|phase1_expression=0,0,0,0,0,0.33575854382378,0,0.774739940649458,5.06839399746,4.68129052643987,2.05461561870606,1.19658238493005,0.171200729931206,0.34968160967599,0,0.202475267389826,0,0.630924330716475,0.411343300817216,0,0.0850432901510698,0.297872853602656,0.261199789138935,0.159992422793407,0,0,0,0,0.190023419456374,0.504060259519861,0.221730510655305,0,0,0,0.577703239502549,0,0,0.418531630736908,3.1253413780952,1.0470474879476,4.70585190424811,1.36609096991689,2.42755176515577,0.125896817975577,0.101376931219515,0,0,0,0,0,0,0,0,0,0.336093799142464,0,0,0,0,0,0,0,0,0,0,0.7104801149461,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.280888840263504,0,0,0,0,0,0,0,0,0,0,0.11418387971906,2.07150306917737,0,0,0,0,0,0,0,0,0,0.884610551949874,0,0.220841518460394,0,0,0,0,0,0.11981512450592,0,0,0.149790639404823,0,0,0,0,0,0,0,0.124406970610093,0,0,0,0,0,0,0,0,0,0,0,0,0,0.219195732427575,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.268273401399619,0,0,0,0,0,0,0,0,0,0.330418782983798,0.264450566663544,0,0,0,0,0,0,0,0,0,0,0,0,0.864552199498777,0.398282546508734,0,0,0,0,0,0,0,0,0,0.246794327843601,0,0,0,0,0,0,0,0,0,0,0,0,0,0.252578877947112,0,0.482443521363367,0.184753190166605,0,0,0,0,0,0.476087281772027,0,0,0,0.159454768657487,0.327726629431476,0.172684981865896,0.433947175744535,0,1.08781136763742,0,0.275936746304732,0,0,0.163934945376675,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.164970122972535,0,0,0.302323556964751,0,0,0,0,0,0,0,1.05418608574999,0,0,0,0,0.214337035031592,0,0,0.164549020602121,0,0,0.21183207086382,0.220528398054962,0.32977250588296,0,0.120625849856312,0,0,0,0,0,0,0.185194527369712,0.376736914009382,0,0.228778173206523,0.169978429993855,0,0,0,0,0,0,0,0,0,0.0826534557253359,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.26404448251271,0,0.102710957164827,0,0.179026695667481,0.39736270956253,0.120195449519969,0.295379054349154,0.201932899896295,0.0762068066549998,0.504130925684203,0.194915761479505,1.25075394132428,0.467507608726276,0.226730383615211,0,0,0,0,0,0.36630324853453,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.183843508450014,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0846146078916765,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | |||
|short_description=p@chr6:129187277..129187288,+ | |||
}} |
Revision as of 09:04, 14 September 2013
Short description: | p@chr6:129187277..129187288, + |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr6:129187277..129187288, + |
Coexpression cluster: | MCL_coexpression_mm9:233 |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
thymus | 1.11e-09 | 23 |
neck | 1.11e-09 | 23 |
respiratory system epithelium | 1.11e-09 | 23 |
hemolymphoid system gland | 1.11e-09 | 23 |
pharyngeal epithelium | 1.11e-09 | 23 |
thymic region | 1.11e-09 | 23 |
pharyngeal gland | 1.11e-09 | 23 |
entire pharyngeal arch endoderm | 1.11e-09 | 23 |
thymus primordium | 1.11e-09 | 23 |
early pharyngeal endoderm | 1.11e-09 | 23 |
pharynx | 2.90e-09 | 24 |
gland of gut | 2.90e-09 | 24 |
upper respiratory tract | 2.90e-09 | 24 |
chordate pharynx | 2.90e-09 | 24 |
pharyngeal arch system | 2.90e-09 | 24 |
pharyngeal region of foregut | 2.90e-09 | 24 |
segment of respiratory tract | 3.39e-08 | 27 |
lymph node | 9.86e-08 | 1 |
axillary lymph node | 9.86e-08 | 1 |
peripheral lymph node | 9.86e-08 | 1 |
shoulder | 9.86e-08 | 1 |
hemolymphoid system | 1.08e-07 | 48 |
immune system | 1.08e-07 | 48 |
hemopoietic organ | 1.32e-07 | 29 |
immune organ | 1.32e-07 | 29 |
Ontology term | p-value | n |
---|---|---|
musculoskeletal system cancer | 2.90e-09 | 3 |
muscle cancer | 2.90e-09 | 3 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.