FFCP PHASE1:Mm9::chr6:67811124..67811133,+: Difference between revisions
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{{FFCP | {{FFCP|EntrezGene=|HGNC=|MCL_coexpression_id=63|UniProt=|association_with_transcript=-19bp_to_ENSMUST00000103309_5end|description=CAGE_peak_1_at_ENSMUST00000103309_5end|id=chr6:67811124..67811133,+|ontology_enrichment_celltype=CL:0000553!4.97e-14!6;CL:0000556!4.97e-14!6;CL:0000050!4.86e-09!9;CL:0002027!1.33e-07!3;CL:0002006!1.33e-07!3;CL:0002024!1.33e-07!3;CL:0000414!3.16e-07!11|ontology_enrichment_celltype_v019_2=CL:0000553,9.23e-32,6;CL:0000556,9.23e-32,6;CL:0000050,4.43e-21,9;CL:0002027,3.53e-16,3;CL:0002006,3.53e-16,3;CL:0002024,3.53e-16,3;CL:0000839,1.74e-14,13;CL:0000763,1.07e-11,16;CL:0002031,7.22e-10,25;CL:0000049,8.79e-10,19;CL:0000988,1.49e-07,32;CL:0002032,1.49e-07,32;CL:0000037,1.49e-07,32;CL:0000837,1.49e-07,32|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0007023!2.83e-13!51;UBERON:0002465!7.28e-08!3|ontology_enrichment_uberon_v019_2=UBERON:0002465,8.31e-17,3;UBERON:0002193,6.10e-12,48;UBERON:0002405,6.10e-12,48;UBERON:0002371,1.07e-11,16;UBERON:0001962,1.67e-11,2;UBERON:0001961,1.67e-11,2;UBERON:0001744,1.67e-11,2;UBERON:0001474,3.65e-11,22;UBERON:0004765,3.65e-11,22;UBERON:0001434,3.65e-11,22;UBERON:0001155,4.88e-11,2;UBERON:0000059,4.88e-11,2;UBERON:0002204,1.86e-07,32;UBERON:0007023,4.07e-07,51;UBERON:0000029,5.73e-07,1;UBERON:0001097,5.73e-07,1;UBERON:0003968,5.73e-07,1;UBERON:0001467,5.73e-07,1|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,5.66286595086627,6.47920855647443,2.09868563438444,13.4071420277251,10.4206969540361,8.48779303596061,0.0850432901510698,0,0,6.07971206614945,6.19405058881359,0,0,0,0,0.756090389279792,0.443461021310609,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,8.05356509077134,0.725362142011344,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.075726193333184,0,0,0,0,0,0,0,0.140444420131752,0,0,0,0,0,0,0,0,0,0,0.45673551887624,49.9750115439041,0.29688427812965,0,0,0,0,0,0,0,0.289198713839823,1.76922110389975,0,0,0.484875253135222,1.86391761218122,0,0,3.57639877292028,0,0,0,0,0,0,0,0,0,0,0,0.248813941220186,0,0.210441855886474,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.330418782983798,0.793351699990633,0,0,0,0,0,0,0,0,0,0,0,0,0,0.597423819763102,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.162135226775035,0,0,0,0,0,0,0,1.66277871149944,0,0,0,0,0,0,0,0,0,0,0.327726629431476,0.172684981865896,0.289298117163023,0,0,0,0.551873492609465,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.141940085208269,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.220528398054962,0,0,0,0,0,0,0,10.0813819670733,0,0,0,0.136694227721025,1.37266903923914,0,0.139951452323658,0,0.954670618015114,0,0,0,0,0,0,0,0,0,4.34937519160848,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.120195449519969,0,0,0,0,0.0974578807397524,0,0,0,0,0,0,0.19318959403219,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0|short_description=p1@ENSMUST00000103309}} | ||
|EntrezGene= | |||
|HGNC= | |||
|MCL_coexpression_id=63 | |||
|UniProt= | |||
|association_with_transcript=-19bp_to_ENSMUST00000103309_5end | |||
|description=CAGE_peak_1_at_ENSMUST00000103309_5end | |||
|id=chr6:67811124..67811133,+ | |||
|ontology_enrichment_celltype=CL:0000553!4.97e-14!6;CL:0000556!4.97e-14!6;CL:0000050!4.86e-09!9;CL:0002027!1.33e-07!3;CL:0002006!1.33e-07!3;CL:0002024!1.33e-07!3;CL:0000414!3.16e-07!11 | |||
|ontology_enrichment_celltype_v019_2=CL:0000553,9.23e-32,6;CL:0000556,9.23e-32,6;CL:0000050,4.43e-21,9;CL:0002027,3.53e-16,3;CL:0002006,3.53e-16,3;CL:0002024,3.53e-16,3;CL:0000839,1.74e-14,13;CL:0000763,1.07e-11,16;CL:0002031,7.22e-10,25;CL:0000049,8.79e-10,19;CL:0000988,1.49e-07,32;CL:0002032,1.49e-07,32;CL:0000037,1.49e-07,32;CL:0000837,1.49e-07,32 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!2.83e-13!51;UBERON:0002465!7.28e-08!3 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002465,8.31e-17,3;UBERON:0002193,6.10e-12,48;UBERON:0002405,6.10e-12,48;UBERON:0002371,1.07e-11,16;UBERON:0001962,1.67e-11,2;UBERON:0001961,1.67e-11,2;UBERON:0001744,1.67e-11,2;UBERON:0001474,3.65e-11,22;UBERON:0004765,3.65e-11,22;UBERON:0001434,3.65e-11,22;UBERON:0001155,4.88e-11,2;UBERON:0000059,4.88e-11,2;UBERON:0002204,1.86e-07,32;UBERON:0007023,4.07e-07,51;UBERON:0000029,5.73e-07,1;UBERON:0001097,5.73e-07,1;UBERON:0003968,5.73e-07,1;UBERON:0001467,5.73e-07,1 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,5.66286595086627,6.47920855647443,2.09868563438444,13.4071420277251,10.4206969540361,8.48779303596061,0.0850432901510698,0,0,6.07971206614945,6.19405058881359,0,0,0,0,0.756090389279792,0.443461021310609,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,8.05356509077134,0.725362142011344,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.075726193333184,0,0,0,0,0,0,0,0.140444420131752,0,0,0,0,0,0,0,0,0,0,0.45673551887624,49.9750115439041,0.29688427812965,0,0,0,0,0,0,0,0.289198713839823,1.76922110389975,0,0,0.484875253135222,1.86391761218122,0,0,3.57639877292028,0,0,0,0,0,0,0,0,0,0,0,0.248813941220186,0,0.210441855886474,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.330418782983798,0.793351699990633,0,0,0,0,0,0,0,0,0,0,0,0,0,0.597423819763102,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.162135226775035,0,0,0,0,0,0,0,1.66277871149944,0,0,0,0,0,0,0,0,0,0,0.327726629431476,0.172684981865896,0.289298117163023,0,0,0,0.551873492609465,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.141940085208269,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.220528398054962,0,0,0,0,0,0,0,10.0813819670733,0,0,0,0.136694227721025,1.37266903923914,0,0.139951452323658,0,0.954670618015114,0,0,0,0,0,0,0,0,0,4.34937519160848,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.120195449519969,0,0,0,0,0.0974578807397524,0,0,0,0,0,0,0.19318959403219,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | |||
|short_description=p1@ENSMUST00000103309 | |||
}} |
Revision as of 10:28, 14 September 2013
Short description: | p1@ENSMUST00000103309 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_1_at_ENSMUST00000103309_5end |
Coexpression cluster: | MCL_coexpression_mm9:63 |
Association with transcript: | -19bp_to_ENSMUST00000103309_5end |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
megakaryocyte progenitor cell | 9.23e-32 | 6 |
megakaryocyte | 9.23e-32 | 6 |
megakaryocyte-erythroid progenitor cell | 4.43e-21 | 9 |
CD9-positive, CD41-positive megakaryocyte cell | 3.53e-16 | 3 |
Kit-positive, CD34-negative megakaryocyte erythroid progenitor cell | 3.53e-16 | 3 |
Kit-positive megakaryocyte progenitor cell | 3.53e-16 | 3 |
myeloid lineage restricted progenitor cell | 1.74e-14 | 13 |
myeloid cell | 1.07e-11 | 16 |
hematopoietic lineage restricted progenitor cell | 7.22e-10 | 25 |
common myeloid progenitor | 8.79e-10 | 19 |
hematopoietic cell | 1.49e-07 | 32 |
hematopoietic oligopotent progenitor cell | 1.49e-07 | 32 |
hematopoietic stem cell | 1.49e-07 | 32 |
hematopoietic multipotent progenitor cell | 1.49e-07 | 32 |
Ontology term | p-value | n |
---|---|---|
lymphoid system | 8.31e-17 | 3 |
hemolymphoid system | 6.10e-12 | 48 |
immune system | 6.10e-12 | 48 |
bone marrow | 1.07e-11 | 16 |
gut-associated lymphoid tissue | 1.67e-11 | 2 |
mucosa-associated lymphoid tissue | 1.67e-11 | 2 |
lymphoid tissue | 1.67e-11 | 2 |
bone element | 3.65e-11 | 22 |
skeletal element | 3.65e-11 | 22 |
skeletal system | 3.65e-11 | 22 |
colon | 4.88e-11 | 2 |
large intestine | 4.88e-11 | 2 |
musculoskeletal system | 1.86e-07 | 32 |
adult organism | 4.07e-07 | 51 |
lymph node | 5.73e-07 | 1 |
axillary lymph node | 5.73e-07 | 1 |
peripheral lymph node | 5.73e-07 | 1 |
shoulder | 5.73e-07 | 1 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.