FFCP PHASE1:Mm9::chr6:67892543..67892559,-: Difference between revisions
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{{FFCP | {{FFCP|EntrezGene=|HGNC=|MCL_coexpression_id=63|UniProt=|association_with_transcript=-189bp_to_ENSMUST00000103312_5end|description=CAGE_peak_1_at_ENSMUST00000103312_5end|id=chr6:67892543..67892559,-|ontology_enrichment_celltype=CL:0000553!9.94e-14!6;CL:0000556!9.94e-14!6;CL:0000050!7.57e-09!9;CL:0002027!1.70e-07!3;CL:0002006!1.70e-07!3;CL:0002024!1.70e-07!3;CL:0000414!4.49e-07!11|ontology_enrichment_celltype_v019_2=CL:0000553,4.19e-28,6;CL:0000556,4.19e-28,6;CL:0000050,1.28e-18,9;CL:0002027,1.67e-14,3;CL:0002006,1.67e-14,3;CL:0002024,1.67e-14,3;CL:0000839,9.15e-13,13;CL:0000763,2.75e-10,16;CL:0002031,1.30e-08,25;CL:0000049,1.37e-08,19|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0007023!4.41e-12!51;UBERON:0002465!5.11e-08!3;UBERON:0002193!5.51e-08!48|ontology_enrichment_uberon_v019_2=UBERON:0002465,1.23e-15,3;UBERON:0002193,1.06e-14,48;UBERON:0002405,1.06e-14,48;UBERON:0001962,7.44e-11,2;UBERON:0001961,7.44e-11,2;UBERON:0001744,7.44e-11,2;UBERON:0002371,2.75e-10,16;UBERON:0001474,7.36e-10,22;UBERON:0004765,7.36e-10,22;UBERON:0001434,7.36e-10,22;UBERON:0002390,6.26e-09,45;UBERON:0003061,6.26e-09,45;UBERON:0002106,1.84e-07,6;UBERON:0004457,1.84e-07,6;UBERON:0000042,1.84e-07,6;UBERON:0004854,1.84e-07,6;UBERON:0009034,1.84e-07,6;UBERON:0002095,1.84e-07,6;UBERON:0004782,1.84e-07,6;UBERON:0003281,1.84e-07,6;UBERON:0009664,1.84e-07,6;UBERON:0002296,1.84e-07,6;UBERON:0005602,1.84e-07,6;UBERON:0001179,1.84e-07,6;UBERON:0006293,1.84e-07,6|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.33042690360362,4.656931149966,3.49780939064073,7.88655413395594,9.46089591879598,6.79023442876848,0.255129870453209,0,0,6.87967418011649,10.5528269290898,0,0,0,0,0.756090389279792,0.443461021310609,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,5.36904339384756,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.140444420131752,0,0,0,0,0,0,0,0,0,0,1.37020655662872,53.0822661476702,0.445326417194474,0,0,0,0,0,0,0,0.289198713839823,4.42305275974937,0,0.220841518460394,0,0,0,0,12.517395705221,0,0,0,0,0,0,0,0,0,0,0,0,0,0.841767423545896,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.98251269790279,1.58670339998127,0,0,0,0,0,0,0,0,0,0,0,0,0,0.199141273254367,0,0,0,0,0,0,0.0632365371242573,0.147610147979602,0,0,0,0,0,0,0,0,0,0,0,0.274561413188081,0,0,0,0,0,0,0.739012760666419,0,0,0,0,0,0,0,0.157635144106191,0,0,0.163863314715738,0.172684981865896,0.433947175744535,0,0,0,0.275936746304732,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.141940085208269,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,10.423123728669,0,0,0,1.23024804948923,3.20289442489132,0,0,0,0.954670618015114,0,0,0,0,0,0,0,0,0,0.621339313086926,0,0,0,0,0,0,0,0,0,0,0,1.26404448251271,0,0,0,0,0,0,0,0.100966449948148,0,0,0.0974578807397524,0,0.116876902181569,0,0,0,0,0.386379188064381,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.170733605754134,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0|short_description=p1@ENSMUST00000103312}} | ||
|EntrezGene= | |||
|HGNC= | |||
|MCL_coexpression_id=63 | |||
|UniProt= | |||
|association_with_transcript=-189bp_to_ENSMUST00000103312_5end | |||
|description=CAGE_peak_1_at_ENSMUST00000103312_5end | |||
|id=chr6:67892543..67892559,- | |||
|ontology_enrichment_celltype=CL:0000553!9.94e-14!6;CL:0000556!9.94e-14!6;CL:0000050!7.57e-09!9;CL:0002027!1.70e-07!3;CL:0002006!1.70e-07!3;CL:0002024!1.70e-07!3;CL:0000414!4.49e-07!11 | |||
|ontology_enrichment_celltype_v019_2=CL:0000553,4.19e-28,6;CL:0000556,4.19e-28,6;CL:0000050,1.28e-18,9;CL:0002027,1.67e-14,3;CL:0002006,1.67e-14,3;CL:0002024,1.67e-14,3;CL:0000839,9.15e-13,13;CL:0000763,2.75e-10,16;CL:0002031,1.30e-08,25;CL:0000049,1.37e-08,19 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!4.41e-12!51;UBERON:0002465!5.11e-08!3;UBERON:0002193!5.51e-08!48 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002465,1.23e-15,3;UBERON:0002193,1.06e-14,48;UBERON:0002405,1.06e-14,48;UBERON:0001962,7.44e-11,2;UBERON:0001961,7.44e-11,2;UBERON:0001744,7.44e-11,2;UBERON:0002371,2.75e-10,16;UBERON:0001474,7.36e-10,22;UBERON:0004765,7.36e-10,22;UBERON:0001434,7.36e-10,22;UBERON:0002390,6.26e-09,45;UBERON:0003061,6.26e-09,45;UBERON:0002106,1.84e-07,6;UBERON:0004457,1.84e-07,6;UBERON:0000042,1.84e-07,6;UBERON:0004854,1.84e-07,6;UBERON:0009034,1.84e-07,6;UBERON:0002095,1.84e-07,6;UBERON:0004782,1.84e-07,6;UBERON:0003281,1.84e-07,6;UBERON:0009664,1.84e-07,6;UBERON:0002296,1.84e-07,6;UBERON:0005602,1.84e-07,6;UBERON:0001179,1.84e-07,6;UBERON:0006293,1.84e-07,6 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.33042690360362,4.656931149966,3.49780939064073,7.88655413395594,9.46089591879598,6.79023442876848,0.255129870453209,0,0,6.87967418011649,10.5528269290898,0,0,0,0,0.756090389279792,0.443461021310609,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,5.36904339384756,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.140444420131752,0,0,0,0,0,0,0,0,0,0,1.37020655662872,53.0822661476702,0.445326417194474,0,0,0,0,0,0,0,0.289198713839823,4.42305275974937,0,0.220841518460394,0,0,0,0,12.517395705221,0,0,0,0,0,0,0,0,0,0,0,0,0,0.841767423545896,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.98251269790279,1.58670339998127,0,0,0,0,0,0,0,0,0,0,0,0,0,0.199141273254367,0,0,0,0,0,0,0.0632365371242573,0.147610147979602,0,0,0,0,0,0,0,0,0,0,0,0.274561413188081,0,0,0,0,0,0,0.739012760666419,0,0,0,0,0,0,0,0.157635144106191,0,0,0.163863314715738,0.172684981865896,0.433947175744535,0,0,0,0.275936746304732,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.141940085208269,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,10.423123728669,0,0,0,1.23024804948923,3.20289442489132,0,0,0,0.954670618015114,0,0,0,0,0,0,0,0,0,0.621339313086926,0,0,0,0,0,0,0,0,0,0,0,1.26404448251271,0,0,0,0,0,0,0,0.100966449948148,0,0,0.0974578807397524,0,0.116876902181569,0,0,0,0,0.386379188064381,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.170733605754134,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | |||
|short_description=p1@ENSMUST00000103312 | |||
}} |
Revision as of 10:28, 14 September 2013
Short description: | p1@ENSMUST00000103312 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_1_at_ENSMUST00000103312_5end |
Coexpression cluster: | MCL_coexpression_mm9:63 |
Association with transcript: | -189bp_to_ENSMUST00000103312_5end |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
megakaryocyte progenitor cell | 4.19e-28 | 6 |
megakaryocyte | 4.19e-28 | 6 |
megakaryocyte-erythroid progenitor cell | 1.28e-18 | 9 |
CD9-positive, CD41-positive megakaryocyte cell | 1.67e-14 | 3 |
Kit-positive, CD34-negative megakaryocyte erythroid progenitor cell | 1.67e-14 | 3 |
Kit-positive megakaryocyte progenitor cell | 1.67e-14 | 3 |
myeloid lineage restricted progenitor cell | 9.15e-13 | 13 |
myeloid cell | 2.75e-10 | 16 |
hematopoietic lineage restricted progenitor cell | 1.30e-08 | 25 |
common myeloid progenitor | 1.37e-08 | 19 |
Ontology term | p-value | n |
---|---|---|
lymphoid system | 1.23e-15 | 3 |
hemolymphoid system | 1.06e-14 | 48 |
immune system | 1.06e-14 | 48 |
gut-associated lymphoid tissue | 7.44e-11 | 2 |
mucosa-associated lymphoid tissue | 7.44e-11 | 2 |
lymphoid tissue | 7.44e-11 | 2 |
bone marrow | 2.75e-10 | 16 |
bone element | 7.36e-10 | 22 |
skeletal element | 7.36e-10 | 22 |
skeletal system | 7.36e-10 | 22 |
hematopoietic system | 6.26e-09 | 45 |
blood island | 6.26e-09 | 45 |
spleen | 1.84e-07 | 6 |
cavity lining | 1.84e-07 | 6 |
serous membrane | 1.84e-07 | 6 |
gastrointestinal system mesentery | 1.84e-07 | 6 |
stomach region | 1.84e-07 | 6 |
mesentery | 1.84e-07 | 6 |
gastrointestinal system serosa | 1.84e-07 | 6 |
mesentery of stomach | 1.84e-07 | 6 |
gut mesentery | 1.84e-07 | 6 |
dorsal mesentery | 1.84e-07 | 6 |
dorsal mesogastrium | 1.84e-07 | 6 |
peritoneal cavity | 1.84e-07 | 6 |
spleen primordium | 1.84e-07 | 6 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.