FFCP PHASE1:Hg19::chrX:118892545..118892562,+: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=347454|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding|HGNC=32960|TSSclassifier=S|UniProt=A6NJG2|association_with_transcript=-13bp_to_ENST00000343905,NM_001105576,uc010nql.2_5end|description=CAGE_peak_1_at_SOWAHD_5end|id=chrX:118892545..118892562,+|ontology_enrichment_celltype=CL:0002194!5.38e-17!63;CL:0000576!5.38e-17!63;CL:0000040!5.38e-17!63;CL:0000559!5.38e-17!63;CL:0000839!2.37e-16!70;CL:0002009!6.90e-16!65;CL:0000037!1.11e-15!172;CL:0000566!1.11e-15!172;CL:0000557!1.52e-15!71;CL:0002087!3.68e-15!119;CL:0000763!4.77e-15!112;CL:0000049!4.77e-15!112;CL:0000766!8.96e-15!76;CL:0002032!1.52e-14!165;CL:0000837!1.52e-14!165;CL:0000988!2.17e-14!182;CL:0002031!9.71e-14!124;CL:0000738!2.14e-12!140;CL:0002057!3.52e-10!42;CL:0000860!9.42e-09!45|ontology_enrichment_celltype_v019=CL:0000235;1.79e-15;6!CL:0000766;4.88e-09;69!CL:0000576;8.17e-09;48!CL:0002619;2.83e-08;3!CL:0000236;3.96e-08;13!CL:0000875;4.61e-08;3!CL:0002396;4.61e-08;3!CL:0000763;3.20e-07;100!CL:0000473;7.13e-07;39!CL:0000234;7.13e-07;39|ontology_enrichment_celltype_v019_2=CL:0002194,1.12e-23,59;CL:0000576,1.12e-23,59;CL:0000040,1.12e-23,59;CL:0000559,1.12e-23,59;CL:0002009,1.21e-22,61;CL:0000763,1.72e-22,108;CL:0000049,1.72e-22,108;CL:0002032,6.64e-22,161;CL:0000837,6.64e-22,161;CL:0000557,1.30e-21,67;CL:0000037,1.49e-21,168;CL:0000839,2.46e-20,66;CL:0000988,9.08e-20,177;CL:0002087,5.33e-19,115;CL:0000766,5.41e-18,72;CL:0002031,9.00e-18,120;CL:0000235,1.58e-15,6;CL:0000738,1.80e-14,136;CL:0000473,3.89e-13,48;CL:0000234,3.89e-13,48;CL:0002393,3.19e-09,9;CL:0002397,3.19e-09,9;CL:0002619,3.33e-08,3;CL:0000875,4.21e-08,3;CL:0002396,4.21e-08,3;CL:0000236,1.34e-07,14;CL:0000134,2.62e-07,354;CL:0000219,3.01e-07,386;CL:0002320,6.52e-07,361|ontology_enrichment_development_v019=CL:0000049;8.41e-09;108|ontology_enrichment_disease=|ontology_enrichment_disease_v019=DOID:8692;2.28e-09;31|ontology_enrichment_disease_v019_2=DOID:8692,6.63e-10,31;DOID:1240,3.05e-07,39|ontology_enrichment_uberon=UBERON:0002390!1.59e-18!102;UBERON:0003061!1.59e-18!102;UBERON:0002193!5.83e-16!112;UBERON:0002371!2.26e-13!80;UBERON:0001474!9.85e-12!86;UBERON:0002405!4.32e-11!115;UBERON:0007023!1.36e-10!115;UBERON:0004765!1.54e-09!101;UBERON:0001434!1.54e-09!101|ontology_enrichment_uberon_v019=UBERON:0000178;2.20e-09;15!UBERON:0000179;2.20e-09;15!UBERON:0000463;2.20e-09;15|ontology_enrichment_uberon_v019_2=UBERON:0002390,4.88e-26,98;UBERON:0003061,4.88e-26,98;UBERON:0002193,1.32e-22,108;UBERON:0002371,1.44e-19,76;UBERON:0001474,1.58e-17,82;UBERON:0002405,1.22e-15,93;UBERON:0004765,3.07e-15,90;UBERON:0001434,5.53e-14,100;UBERON:0000178,2.72e-09,15;UBERON:0000179,2.72e-09,15;UBERON:0000463,2.72e-09,15;UBERON:0003081,1.82e-08,203;UBERON:0002384,8.27e-07,371|phase1_expression=0,0,0,0,0.446961094427288,0,0,0,0,0,0,0.436882744260345,0,0,0,0,0,0,0,0.123121058076788,0.408001382488506,0.313454721478088,0,0,0,0.229240217243854,0.57470412614962,0.472264687882075,0,0,0.928896739896456,0,0,0,0,1.9903692548239,1.76160263600908,0,0.802177789880567,0.868043482863407,9.1805344438369,5.18229865630367,2.31818010870768,0.581592955118259,3.77875943688809,2.66842467306598,0.697287110717054,1.23350366406548,0.309706370895104,0,0.256160706529101,0.236482229888585,0.344745680736619,0.645484683583826,1.35426486594342,0.941211697713023,0.545812300115692,0.898893937780338,0,0.641858054152187,0,0,0.199463657621632,0,0,0,0.622822248995575,0.251248665256743,0,0.217188844705117,0.605399502633369,0.368277635987565,0,2.95757400836718,2.12604299965044,4.82214884669265,3.70684482783434,2.70318407114711,2.4108838004562,4.27519115611873,2.78483348078726,4.56660384411585,0,4.36910889009705,9.7846017924991,2.56038133539904,2.80277190925209,1.72425731986345,4.62731410949403,3.81621501814146,0,0,0,0,0.560508562981536,2.37045676297569,0,0,0,0,0,0,0,0.334231370655521,0,0,0,0.128091319725675,0,0.164437904603676,0.276350017785848,0,0.296573126324121,0.267540828089713,1.04535523804977,0.339928028092699,0,0.34362744548263,0,0.637130828648193,0.651083453856419,0,1.05402583354441,0.127986611154418,0,0.236777252044017,0,0,0,0,0,0,0.12786256184353,0,0,0,0,0,0,0,0,1.30979075497713,0.364295288292542,0.370784442784429,2.27183175558278,1.56716763569341,3.45690697349049,0.476981248610684,0,0.371457501329565,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.354668382198357,0,0,0.24666754841716,0,0,0,0,0,0,0,0,0,0.117434498643765,0,0,0,0.122834317311768,0,1.18800285728205,1.23633464639278,0,0,0,0,0,0.438977620880838,0.30648779579902,1.65261864797256,0,0,0.640672166455702,0,0,0,0.257640540045629,0,0,0.389748020644795,0,0,0.161646056818812,0,0.10075209822764,0,0,0,0,0.243947412259191,0.662648841607426,1.04574548582567,0.10366105501537,1.00928340350251,0,1.56449532329816,0,0,0.928735856063958,0.721879481669586,0.118306800039844,0,0,0,0,0,0,0,0,0,0,0,2.94017422771084,0,0,0.590789906681404,0,0.122988438543114,0,0,0,0,0,0,0,0,0,0.234817388471643,0,0,0,0.790204397959275,0,8.37137820697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| ||
|DPIdataset=robustDPI | |||
|EntrezGene=347454 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=32960 | |||
|TSSclassifier=S | |||
|UniProt=A6NJG2 | |||
|association_with_transcript=-13bp_to_ENST00000343905,NM_001105576,uc010nql.2_5end | |||
|description=CAGE_peak_1_at_SOWAHD_5end | |||
|id=chrX:118892545..118892562,+ | |||
|ontology_enrichment_celltype=CL:0002194!5.38e-17!63;CL:0000576!5.38e-17!63;CL:0000040!5.38e-17!63;CL:0000559!5.38e-17!63;CL:0000839!2.37e-16!70;CL:0002009!6.90e-16!65;CL:0000037!1.11e-15!172;CL:0000566!1.11e-15!172;CL:0000557!1.52e-15!71;CL:0002087!3.68e-15!119;CL:0000763!4.77e-15!112;CL:0000049!4.77e-15!112;CL:0000766!8.96e-15!76;CL:0002032!1.52e-14!165;CL:0000837!1.52e-14!165;CL:0000988!2.17e-14!182;CL:0002031!9.71e-14!124;CL:0000738!2.14e-12!140;CL:0002057!3.52e-10!42;CL:0000860!9.42e-09!45 | |||
|ontology_enrichment_celltype_v019=CL:0000235;1.79e-15;6!CL:0000766;4.88e-09;69!CL:0000576;8.17e-09;48!CL:0002619;2.83e-08;3!CL:0000236;3.96e-08;13!CL:0000875;4.61e-08;3!CL:0002396;4.61e-08;3!CL:0000763;3.20e-07;100!CL:0000473;7.13e-07;39!CL:0000234;7.13e-07;39 | |||
|ontology_enrichment_celltype_v019_2=CL:0002194,1.12e-23,59;CL:0000576,1.12e-23,59;CL:0000040,1.12e-23,59;CL:0000559,1.12e-23,59;CL:0002009,1.21e-22,61;CL:0000763,1.72e-22,108;CL:0000049,1.72e-22,108;CL:0002032,6.64e-22,161;CL:0000837,6.64e-22,161;CL:0000557,1.30e-21,67;CL:0000037,1.49e-21,168;CL:0000839,2.46e-20,66;CL:0000988,9.08e-20,177;CL:0002087,5.33e-19,115;CL:0000766,5.41e-18,72;CL:0002031,9.00e-18,120;CL:0000235,1.58e-15,6;CL:0000738,1.80e-14,136;CL:0000473,3.89e-13,48;CL:0000234,3.89e-13,48;CL:0002393,3.19e-09,9;CL:0002397,3.19e-09,9;CL:0002619,3.33e-08,3;CL:0000875,4.21e-08,3;CL:0002396,4.21e-08,3;CL:0000236,1.34e-07,14;CL:0000134,2.62e-07,354;CL:0000219,3.01e-07,386;CL:0002320,6.52e-07,361 | |||
|ontology_enrichment_development_v019=CL:0000049;8.41e-09;108 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:8692;2.28e-09;31 | |||
|ontology_enrichment_disease_v019_2=DOID:8692,6.63e-10,31;DOID:1240,3.05e-07,39 | |||
|ontology_enrichment_uberon=UBERON:0002390!1.59e-18!102;UBERON:0003061!1.59e-18!102;UBERON:0002193!5.83e-16!112;UBERON:0002371!2.26e-13!80;UBERON:0001474!9.85e-12!86;UBERON:0002405!4.32e-11!115;UBERON:0007023!1.36e-10!115;UBERON:0004765!1.54e-09!101;UBERON:0001434!1.54e-09!101 | |||
|ontology_enrichment_uberon_v019=UBERON:0000178;2.20e-09;15!UBERON:0000179;2.20e-09;15!UBERON:0000463;2.20e-09;15 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002390,4.88e-26,98;UBERON:0003061,4.88e-26,98;UBERON:0002193,1.32e-22,108;UBERON:0002371,1.44e-19,76;UBERON:0001474,1.58e-17,82;UBERON:0002405,1.22e-15,93;UBERON:0004765,3.07e-15,90;UBERON:0001434,5.53e-14,100;UBERON:0000178,2.72e-09,15;UBERON:0000179,2.72e-09,15;UBERON:0000463,2.72e-09,15;UBERON:0003081,1.82e-08,203;UBERON:0002384,8.27e-07,371 | |||
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| |||
|short_description=p1@SOWAHD | |||
}} |
Revision as of 10:33, 14 September 2013
Short description: | p1@SOWAHD |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_1_at_SOWAHD_5end |
Coexpression cluster: | NA |
Association with transcript: | -13bp_to_ENST00000343905, NM_001105576, uc010nql.2_5end |
EntrezGene: | SOWAHD |
HGNC: | 32960 |
UniProt: | A6NJG2 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
monopoietic cell | 1.12e-23 | 59 |
monocyte | 1.12e-23 | 59 |
monoblast | 1.12e-23 | 59 |
promonocyte | 1.12e-23 | 59 |
macrophage dendritic cell progenitor | 1.21e-22 | 61 |
myeloid cell | 1.72e-22 | 108 |
common myeloid progenitor | 1.72e-22 | 108 |
hematopoietic oligopotent progenitor cell | 6.64e-22 | 161 |
hematopoietic multipotent progenitor cell | 6.64e-22 | 161 |
granulocyte monocyte progenitor cell | 1.30e-21 | 67 |
hematopoietic stem cell | 1.49e-21 | 168 |
myeloid lineage restricted progenitor cell | 2.46e-20 | 66 |
hematopoietic cell | 9.08e-20 | 177 |
nongranular leukocyte | 5.33e-19 | 115 |
myeloid leukocyte | 5.41e-18 | 72 |
hematopoietic lineage restricted progenitor cell | 9.00e-18 | 120 |
macrophage | 1.58e-15 | 6 |
leukocyte | 1.80e-14 | 136 |
defensive cell | 3.89e-13 | 48 |
phagocyte | 3.89e-13 | 48 |
intermediate monocyte | 3.19e-09 | 9 |
CD14-positive, CD16-positive monocyte | 3.19e-09 | 9 |
adult endothelial progenitor cell | 3.33e-08 | 3 |
non-classical monocyte | 4.21e-08 | 3 |
CD14-low, CD16-positive monocyte | 4.21e-08 | 3 |
B cell | 1.34e-07 | 14 |
mesenchymal cell | 2.62e-07 | 354 |
motile cell | 3.01e-07 | 386 |
connective tissue cell | 6.52e-07 | 361 |
Ontology term | p-value | n |
---|---|---|
hematopoietic system | 4.88e-26 | 98 |
blood island | 4.88e-26 | 98 |
hemolymphoid system | 1.32e-22 | 108 |
bone marrow | 1.44e-19 | 76 |
bone element | 1.58e-17 | 82 |
immune system | 1.22e-15 | 93 |
skeletal element | 3.07e-15 | 90 |
skeletal system | 5.53e-14 | 100 |
blood | 2.72e-09 | 15 |
haemolymphatic fluid | 2.72e-09 | 15 |
organism substance | 2.72e-09 | 15 |
lateral plate mesoderm | 1.82e-08 | 203 |
connective tissue | 8.27e-07 | 371 |
Ontology term | p-value | n |
---|---|---|
myeloid leukemia | 6.63e-10 | 31 |
leukemia | 3.05e-07 | 39 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.