FFCP PHASE1:Mm9::chr6:88777388..88777396,+: Difference between revisions
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{{FFCP | {{FFCP|EntrezGene=NA|HGNC=|MCL_coexpression_id=148|UniProt=NA|association_with_transcript=NA|description=CAGE_peak_at_chr6:88777388..88777396,+|id=chr6:88777388..88777396,+|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019_2=CL:0002605,7.02e-19,2;CL:0002604,7.02e-19,2;CL:0000128,6.10e-14,6;CL:0000126,6.10e-14,6;CL:0000127,6.10e-14,6;CL:0002453,1.29e-10,8;CL:0000333,1.31e-08,10;CL:0000095,1.31e-08,10;CL:0000243,1.31e-08,10;CL:0000123,1.31e-08,10;CL:0000125,1.31e-08,10;CL:0000030,1.31e-08,10;CL:0000339,1.31e-08,10|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0002021!3.71e-09!10;UBERON:0000411!3.71e-09!10;UBERON:0001950!3.71e-09!10;UBERON:0002619!6.21e-07!17;UBERON:0004111!7.93e-07!122|ontology_enrichment_uberon_v019_2=UBERON:0002619,1.20e-08,17;UBERON:0000956,4.74e-07,21;UBERON:0001869,4.74e-07,21;UBERON:0000203,4.74e-07,21|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.202475267389826,0,0,0.137114433605739,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.09012578190223,1.09843091367236,6.41618666945135,0.279972843250725,0,0,0,0,0,0,0,0,0,0,0,0,0,0.988866362566974,0.7104801149461,0,0.384218305321555,0,0,0,0,0.220868540951614,0,0,0,0,0.127687338085188,0.307213066512487,0,0,0,0.279182999001381,0,0.30559649555362,0,0.284743361598206,0,0.151452386666368,0,0.289864488701678,0,0,1.07940638327563,0.649776417447669,0.448026887097336,0.280888840263504,0,0,0,0.14084341977668,0,0,0,0,0,0,0,0.258937883647172,0.148442139064825,0,0,0,0,0,0.251333182659351,0,0.433798070759735,0,0,0,0,0,0,0.209446706813455,0.255457055208591,0,0,0,0,0,0,0.173824320192276,0,0.41557608911912,0.324482526135515,0,0.124406970610093,0.505445516867349,2.31486041475121,0,0,0,0,0,0,0,1.29351685369508,0,0.189106080167819,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.116765342367169,0,0.164167464079095,0.162137619091711,0,0,0.134206418760372,0,0,0,0,0,0,0.128867461322093,0,0,0,0,0.494096864172033,0,0,0,0,0,0,0,0,0,0.203651327845314,0,0,0,0,0,0.370191491765402,0,0.166845105716094,0,0.224862112384854,0.202860121388503,0,0.25462585178142,0,0,0,1.43768206527355,0.744281895337007,0,0.252578877947112,0.358794827043824,0,0.184753190166605,0,0,0,0,0,0.476087281772027,0.195133647857799,0.157635144106191,0.221464689648775,0.318909537314974,0.327726629431476,0,0,0,0,0.491764273019036,0.275936746304732,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.141940085208269,0.178065603667255,0,0,0,0.242780636154981,0,0,0.295301892880773,0.307435147943927,0,0,0,0,1.05418608574999,0,0,0,0,0,0,0,0,0,0,0,0,0.49465875882444,0,0.120625849856312,0.119372344003136,0,0.291480836629851,0,0,0,0,0,0.136694227721025,0,0,0,0,0,0,0,0,0,0,0.269728692769641,0.165306911450672,0.26175594198403,0,0.621339313086926,0,0,0,0,0,0,0,0,0.104859344425711,0,0.288030006257865,0,0,0,0,0,0,0,0.147689527174577,0,0,0,0,0,0,0,0,0.0897138566094757,0,0.386379188064381,0,0,0,0,0,0.460325236507177,0.572895513439397,0.515559547031063,0.685082519770642,0.755393897389701,0.675022500231806,1.35096360967266,0.906284817968409,1.03552062350364,0,0,0,0,0,0,0,0.206035057238894,0,0,0,0,0.187283014939765,0,0.0574354689556133,0,0.115884325944855,0,0,0.147198920134397,0.342869252385415,0.177475806159338,0,0,0,0.0846146078916765,0,0,0,0,0,0,0,0,0,0,0,0.429742108096597,0.191288332068843,0.441182838239031,0|short_description=p@chr6:88777388..88777396,+}} | ||
|EntrezGene=NA | |||
|HGNC= | |||
|MCL_coexpression_id=148 | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|description=CAGE_peak_at_chr6:88777388..88777396,+ | |||
|id=chr6:88777388..88777396,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019_2=CL:0002605,7.02e-19,2;CL:0002604,7.02e-19,2;CL:0000128,6.10e-14,6;CL:0000126,6.10e-14,6;CL:0000127,6.10e-14,6;CL:0002453,1.29e-10,8;CL:0000333,1.31e-08,10;CL:0000095,1.31e-08,10;CL:0000243,1.31e-08,10;CL:0000123,1.31e-08,10;CL:0000125,1.31e-08,10;CL:0000030,1.31e-08,10;CL:0000339,1.31e-08,10 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002021!3.71e-09!10;UBERON:0000411!3.71e-09!10;UBERON:0001950!3.71e-09!10;UBERON:0002619!6.21e-07!17;UBERON:0004111!7.93e-07!122 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002619,1.20e-08,17;UBERON:0000956,4.74e-07,21;UBERON:0001869,4.74e-07,21;UBERON:0000203,4.74e-07,21 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.202475267389826,0,0,0.137114433605739,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.09012578190223,1.09843091367236,6.41618666945135,0.279972843250725,0,0,0,0,0,0,0,0,0,0,0,0,0,0.988866362566974,0.7104801149461,0,0.384218305321555,0,0,0,0,0.220868540951614,0,0,0,0,0.127687338085188,0.307213066512487,0,0,0,0.279182999001381,0,0.30559649555362,0,0.284743361598206,0,0.151452386666368,0,0.289864488701678,0,0,1.07940638327563,0.649776417447669,0.448026887097336,0.280888840263504,0,0,0,0.14084341977668,0,0,0,0,0,0,0,0.258937883647172,0.148442139064825,0,0,0,0,0,0.251333182659351,0,0.433798070759735,0,0,0,0,0,0,0.209446706813455,0.255457055208591,0,0,0,0,0,0,0.173824320192276,0,0.41557608911912,0.324482526135515,0,0.124406970610093,0.505445516867349,2.31486041475121,0,0,0,0,0,0,0,1.29351685369508,0,0.189106080167819,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.116765342367169,0,0.164167464079095,0.162137619091711,0,0,0.134206418760372,0,0,0,0,0,0,0.128867461322093,0,0,0,0,0.494096864172033,0,0,0,0,0,0,0,0,0,0.203651327845314,0,0,0,0,0,0.370191491765402,0,0.166845105716094,0,0.224862112384854,0.202860121388503,0,0.25462585178142,0,0,0,1.43768206527355,0.744281895337007,0,0.252578877947112,0.358794827043824,0,0.184753190166605,0,0,0,0,0,0.476087281772027,0.195133647857799,0.157635144106191,0.221464689648775,0.318909537314974,0.327726629431476,0,0,0,0,0.491764273019036,0.275936746304732,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.141940085208269,0.178065603667255,0,0,0,0.242780636154981,0,0,0.295301892880773,0.307435147943927,0,0,0,0,1.05418608574999,0,0,0,0,0,0,0,0,0,0,0,0,0.49465875882444,0,0.120625849856312,0.119372344003136,0,0.291480836629851,0,0,0,0,0,0.136694227721025,0,0,0,0,0,0,0,0,0,0,0.269728692769641,0.165306911450672,0.26175594198403,0,0.621339313086926,0,0,0,0,0,0,0,0,0.104859344425711,0,0.288030006257865,0,0,0,0,0,0,0,0.147689527174577,0,0,0,0,0,0,0,0,0.0897138566094757,0,0.386379188064381,0,0,0,0,0,0.460325236507177,0.572895513439397,0.515559547031063,0.685082519770642,0.755393897389701,0.675022500231806,1.35096360967266,0.906284817968409,1.03552062350364,0,0,0,0,0,0,0,0.206035057238894,0,0,0,0,0.187283014939765,0,0.0574354689556133,0,0.115884325944855,0,0,0.147198920134397,0.342869252385415,0.177475806159338,0,0,0,0.0846146078916765,0,0,0,0,0,0,0,0,0,0,0,0.429742108096597,0.191288332068843,0.441182838239031,0 | |||
|short_description=p@chr6:88777388..88777396,+ | |||
}} |
Revision as of 10:54, 14 September 2013
Short description: | p@chr6:88777388..88777396, + |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr6:88777388..88777396, + |
Coexpression cluster: | MCL_coexpression_mm9:148 |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
astrocyte of the cerebral cortex | 7.02e-19 | 2 |
astrocyte of the hippocampus | 7.02e-19 | 2 |
oligodendrocyte | 6.10e-14 | 6 |
macroglial cell | 6.10e-14 | 6 |
astrocyte | 6.10e-14 | 6 |
oligodendrocyte precursor cell | 1.29e-10 | 8 |
migratory neural crest cell | 1.31e-08 | 10 |
neuron associated cell | 1.31e-08 | 10 |
glial cell (sensu Vertebrata) | 1.31e-08 | 10 |
neuron associated cell (sensu Vertebrata) | 1.31e-08 | 10 |
glial cell | 1.31e-08 | 10 |
glioblast | 1.31e-08 | 10 |
glioblast (sensu Vertebrata) | 1.31e-08 | 10 |
Ontology term | p-value | n |
---|---|---|
regional part of cerebral cortex | 1.20e-08 | 17 |
cerebral cortex | 4.74e-07 | 21 |
cerebral hemisphere | 4.74e-07 | 21 |
pallium | 4.74e-07 | 21 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.