FFCP PHASE1:Mm9::chr7:103360405..103360431,+: Difference between revisions
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{{FFCP | {{FFCP|EntrezGene=23966|HGNC=|MCL_coexpression_id=1|UniProt=Q3UHK6|association_with_transcript=224bp_to_ENSMUST00000107165,uc009iip.1_5end|description=CAGE_peak_9_at_Odz4_5end|id=chr7:103360405..103360431,+|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019_2=CL:0002610,3.05e-09,3;CL:0002614,2.04e-08,3|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0000033!3.60e-29!63;UBERON:0000955!5.24e-27!50;UBERON:0006238!5.24e-27!50;UBERON:0002616!4.80e-26!49;UBERON:0003056!5.15e-25!49;UBERON:0001049!3.39e-22!52;UBERON:0005068!3.39e-22!52;UBERON:0006241!3.39e-22!52;UBERON:0007135!3.39e-22!52;UBERON:0003080!3.91e-22!40;UBERON:0002780!3.38e-21!39;UBERON:0001890!3.38e-21!39;UBERON:0006240!3.38e-21!39;UBERON:0002346!1.88e-19!71;UBERON:0003075!1.88e-19!71;UBERON:0007284!1.88e-19!71;UBERON:0007811!7.47e-18!86;UBERON:0004121!3.06e-17!102;UBERON:0000924!3.06e-17!102;UBERON:0006601!3.06e-17!102;UBERON:0001017!4.56e-17!73;UBERON:0005743!4.56e-17!73;UBERON:0000073!4.55e-16!75;UBERON:0001016!4.55e-16!75;UBERON:0000153!9.48e-16!94;UBERON:0002791!2.39e-15!29;UBERON:0003528!2.39e-15!29;UBERON:0001893!2.39e-15!29;UBERON:0002020!2.43e-13!34;UBERON:0000956!1.72e-12!21;UBERON:0001869!1.72e-12!21;UBERON:0000203!1.72e-12!21;UBERON:0002619!5.78e-10!17;UBERON:0002021!3.43e-09!10;UBERON:0000411!3.43e-09!10;UBERON:0001950!3.43e-09!10;UBERON:0000025!3.27e-07!114;UBERON:0004111!5.07e-07!122;UBERON:0001894!8.13e-07!10;UBERON:0006222!8.13e-07!10;UBERON:0000475!9.46e-07!200|ontology_enrichment_uberon_v019_2=UBERON:0000073,4.48e-29,54;UBERON:0000955,1.40e-28,47;UBERON:0006238,1.40e-28,47;UBERON:0002616,1.78e-26,46;UBERON:0001049,3.35e-25,52;UBERON:0005068,3.35e-25,52;UBERON:0006241,3.35e-25,52;UBERON:0007135,3.35e-25,52;UBERON:0002021,4.05e-25,10;UBERON:0000411,4.05e-25,10;UBERON:0001950,4.05e-25,10;UBERON:0001017,4.29e-24,73;UBERON:0001016,2.70e-23,75;UBERON:0002346,3.32e-23,64;UBERON:0003075,3.32e-23,64;UBERON:0007284,3.32e-23,64;UBERON:0003080,4.43e-23,40;UBERON:0003056,5.07e-22,49;UBERON:0002780,4.66e-21,39;UBERON:0001890,4.66e-21,39;UBERON:0006240,4.66e-21,39;UBERON:0003528,2.15e-20,29;UBERON:0002791,2.15e-20,29;UBERON:0001893,2.15e-20,29;UBERON:0004121,3.90e-20,95;UBERON:0000924,3.90e-20,95;UBERON:0006601,3.90e-20,95;UBERON:0010371,1.17e-19,73;UBERON:0002619,5.56e-17,17;UBERON:0002020,7.23e-17,34;UBERON:0000956,4.85e-16,21;UBERON:0001869,4.85e-16,21;UBERON:0000203,4.85e-16,21;UBERON:0010314,1.93e-14,92;UBERON:0002950,3.52e-11,4;UBERON:0001891,3.52e-11,4;UBERON:0009616,3.52e-11,4;UBERON:0010286,3.52e-11,4;UBERON:0004684,3.05e-09,3;UBERON:0002275,3.05e-09,3;UBERON:0000025,1.25e-08,114;UBERON:0002038,2.04e-08,3;UBERON:0009663,2.04e-08,3;UBERON:0009661,2.04e-08,3;UBERON:0000125,2.04e-08,3;UBERON:0002308,2.04e-08,3;UBERON:0007023,8.24e-08,51;UBERON:0004111,1.01e-07,122|phase1_expression=0.640595388419176,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.36069264241712,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.194429899074283,0,0,0,0,0,0,0,0,0,0.528990979272033,0,0,0,0,0,0,0,0,0.518448061542388,0.675029691658453,0.630974884054146,0,0,0.122490799214954,0.191690942036473,0.919218786610021,4.40463523997555,6.38436690425939,6.91229399653096,0,0.182975287204819,0.52091337055676,5.02529398202486,2.25105044012672,2.59757021220577,0.294628585473668,0.142371680799103,0,0,0,0,0,0,0,0,0,0.280888840263504,0.170430322578058,0,0,0.14084341977668,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.125666591329675,0.494389935468748,0.144599356919912,0,0,0,0,1.86391761218122,0.878342391034642,1.04723353406728,0,0,0,0,10.0359728401231,11.4375150704657,0.125654352112864,5.21472960576829,4.60287823194595,6.64921742590592,6.65189178577806,0.305518091550949,0.124406970610093,0,1.05220927943237,0.390361328888111,0.229902104433473,0,0.452114453507145,0.340182495756639,0.2562274405697,0.0937017245597288,1.81092359517311,0,0,0.175951124163949,0,0,0,0.205782136407943,0,0,0,0,0.207125772535502,0.234526059981096,0,0,0,0,0,0,0.116765342367169,0.16455984991348,0,0,0,0,0,3.15434922846191,0.308713837137853,0,0,0.426576501070468,0.232236671860439,0.128867461322093,0,0.22237804384487,0.190225626112559,0,0.329397909448022,0,0,0,0,0,0.199141273254367,0.189667900953082,0.228497025219458,1.1270773567308,0.203651327845314,0,0.210407459670956,0.0632365371242573,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.757965647081939,0,0,0.234690248288502,0.167506257441816,0.238043640886014,0,0.157635144106191,0.221464689648775,0.318909537314974,0,0,0,0,0,0,0,6.26147300952389,3.7507739709505,0,0.252470927204373,0,0,0,0,0,0,0,0,0,7.71171159412337,0.425820255624806,0.534196811001766,0,0.329940245945071,0,0,0,0.188605079755898,0.295301892880773,0.307435147943927,0,0,0,0,0,0,2.7235168460303,0.36012218806262,0.258717367565509,0.214337035031592,0.354680467284547,0.535106452806212,0.658196082408484,0.304464949114599,0,0,0,0.8244312647074,0.161464426695906,0.301564624640779,0.119372344003136,0.164140899745061,0,5.37733375830478,0.512612642393558,0.412773735926445,0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| ||
|EntrezGene=23966 | |||
|HGNC= | |||
|MCL_coexpression_id=1 | |||
|UniProt=Q3UHK6 | |||
|association_with_transcript=224bp_to_ENSMUST00000107165,uc009iip.1_5end | |||
|description=CAGE_peak_9_at_Odz4_5end | |||
|id=chr7:103360405..103360431,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019_2=CL:0002610,3.05e-09,3;CL:0002614,2.04e-08,3 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000033!3.60e-29!63;UBERON:0000955!5.24e-27!50;UBERON:0006238!5.24e-27!50;UBERON:0002616!4.80e-26!49;UBERON:0003056!5.15e-25!49;UBERON:0001049!3.39e-22!52;UBERON:0005068!3.39e-22!52;UBERON:0006241!3.39e-22!52;UBERON:0007135!3.39e-22!52;UBERON:0003080!3.91e-22!40;UBERON:0002780!3.38e-21!39;UBERON:0001890!3.38e-21!39;UBERON:0006240!3.38e-21!39;UBERON:0002346!1.88e-19!71;UBERON:0003075!1.88e-19!71;UBERON:0007284!1.88e-19!71;UBERON:0007811!7.47e-18!86;UBERON:0004121!3.06e-17!102;UBERON:0000924!3.06e-17!102;UBERON:0006601!3.06e-17!102;UBERON:0001017!4.56e-17!73;UBERON:0005743!4.56e-17!73;UBERON:0000073!4.55e-16!75;UBERON:0001016!4.55e-16!75;UBERON:0000153!9.48e-16!94;UBERON:0002791!2.39e-15!29;UBERON:0003528!2.39e-15!29;UBERON:0001893!2.39e-15!29;UBERON:0002020!2.43e-13!34;UBERON:0000956!1.72e-12!21;UBERON:0001869!1.72e-12!21;UBERON:0000203!1.72e-12!21;UBERON:0002619!5.78e-10!17;UBERON:0002021!3.43e-09!10;UBERON:0000411!3.43e-09!10;UBERON:0001950!3.43e-09!10;UBERON:0000025!3.27e-07!114;UBERON:0004111!5.07e-07!122;UBERON:0001894!8.13e-07!10;UBERON:0006222!8.13e-07!10;UBERON:0000475!9.46e-07!200 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000073,4.48e-29,54;UBERON:0000955,1.40e-28,47;UBERON:0006238,1.40e-28,47;UBERON:0002616,1.78e-26,46;UBERON:0001049,3.35e-25,52;UBERON:0005068,3.35e-25,52;UBERON:0006241,3.35e-25,52;UBERON:0007135,3.35e-25,52;UBERON:0002021,4.05e-25,10;UBERON:0000411,4.05e-25,10;UBERON:0001950,4.05e-25,10;UBERON:0001017,4.29e-24,73;UBERON:0001016,2.70e-23,75;UBERON:0002346,3.32e-23,64;UBERON:0003075,3.32e-23,64;UBERON:0007284,3.32e-23,64;UBERON:0003080,4.43e-23,40;UBERON:0003056,5.07e-22,49;UBERON:0002780,4.66e-21,39;UBERON:0001890,4.66e-21,39;UBERON:0006240,4.66e-21,39;UBERON:0003528,2.15e-20,29;UBERON:0002791,2.15e-20,29;UBERON:0001893,2.15e-20,29;UBERON:0004121,3.90e-20,95;UBERON:0000924,3.90e-20,95;UBERON:0006601,3.90e-20,95;UBERON:0010371,1.17e-19,73;UBERON:0002619,5.56e-17,17;UBERON:0002020,7.23e-17,34;UBERON:0000956,4.85e-16,21;UBERON:0001869,4.85e-16,21;UBERON:0000203,4.85e-16,21;UBERON:0010314,1.93e-14,92;UBERON:0002950,3.52e-11,4;UBERON:0001891,3.52e-11,4;UBERON:0009616,3.52e-11,4;UBERON:0010286,3.52e-11,4;UBERON:0004684,3.05e-09,3;UBERON:0002275,3.05e-09,3;UBERON:0000025,1.25e-08,114;UBERON:0002038,2.04e-08,3;UBERON:0009663,2.04e-08,3;UBERON:0009661,2.04e-08,3;UBERON:0000125,2.04e-08,3;UBERON:0002308,2.04e-08,3;UBERON:0007023,8.24e-08,51;UBERON:0004111,1.01e-07,122 | |||
|phase1_expression=0.640595388419176,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.36069264241712,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.194429899074283,0,0,0,0,0,0,0,0,0,0.528990979272033,0,0,0,0,0,0,0,0,0.518448061542388,0.675029691658453,0.630974884054146,0,0,0.122490799214954,0.191690942036473,0.919218786610021,4.40463523997555,6.38436690425939,6.91229399653096,0,0.182975287204819,0.52091337055676,5.02529398202486,2.25105044012672,2.59757021220577,0.294628585473668,0.142371680799103,0,0,0,0,0,0,0,0,0,0.280888840263504,0.170430322578058,0,0,0.14084341977668,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.125666591329675,0.494389935468748,0.144599356919912,0,0,0,0,1.86391761218122,0.878342391034642,1.04723353406728,0,0,0,0,10.0359728401231,11.4375150704657,0.125654352112864,5.21472960576829,4.60287823194595,6.64921742590592,6.65189178577806,0.305518091550949,0.124406970610093,0,1.05220927943237,0.390361328888111,0.229902104433473,0,0.452114453507145,0.340182495756639,0.2562274405697,0.0937017245597288,1.81092359517311,0,0,0.175951124163949,0,0,0,0.205782136407943,0,0,0,0,0.207125772535502,0.234526059981096,0,0,0,0,0,0,0.116765342367169,0.16455984991348,0,0,0,0,0,3.15434922846191,0.308713837137853,0,0,0.426576501070468,0.232236671860439,0.128867461322093,0,0.22237804384487,0.190225626112559,0,0.329397909448022,0,0,0,0,0,0.199141273254367,0.189667900953082,0.228497025219458,1.1270773567308,0.203651327845314,0,0.210407459670956,0.0632365371242573,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.757965647081939,0,0,0.234690248288502,0.167506257441816,0.238043640886014,0,0.157635144106191,0.221464689648775,0.318909537314974,0,0,0,0,0,0,0,6.26147300952389,3.7507739709505,0,0.252470927204373,0,0,0,0,0,0,0,0,0,7.71171159412337,0.425820255624806,0.534196811001766,0,0.329940245945071,0,0,0,0.188605079755898,0.295301892880773,0.307435147943927,0,0,0,0,0,0,2.7235168460303,0.36012218806262,0.258717367565509,0.214337035031592,0.354680467284547,0.535106452806212,0.658196082408484,0.304464949114599,0,0,0,0.8244312647074,0.161464426695906,0.301564624640779,0.119372344003136,0.164140899745061,0,5.37733375830478,0.512612642393558,0.412773735926445,0.185194527369712,0,0,0,0,0,0,0,0,0.203319467126849,0.108005340821801,0,0,0,0.0826534557253359,0,0,0,0,0.299033092087958,0,0,0,0.337912250981556,0.469428954583016,0.13020438484395,0,0.241584120826006,0,0,0,0.205421914329655,0,0.179026695667481,0,0.120195449519969,0,0,0,0,0,0.0962118416403295,0,0,0,0,0,0,0,0.183151624267265,0.643105137237198,0,1.12950368523413,1.84130094602871,2.29158205375759,2.749650917499,1.37016503954128,7.55393897389701,4.72515750162264,5.85417564191487,6.79713613476307,6.21312374102184,0.103787347584177,0,0.170733605754134,0.729320151204882,0.209613162627982,0.183843508450014,0.222246727801615,0.206035057238894,0.320919209591815,0,0,0.377252682772152,0.0936415074698824,0.256100609619477,0.114870937911227,0,0,0.192909220463705,0,0.294397840268795,0.342869252385415,0,0,0.145346416632329,0.0941093804153306,0,0,0.263069711437843,0,0,0.118635018124174,0,0,0,0,0,0,0,0.191288332068843,0.220591419119515,0 | |||
|short_description=p9@Odz4 | |||
}} |
Revision as of 11:08, 14 September 2013
Short description: | p9@Odz4 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_9_at_Odz4_5end |
Coexpression cluster: | MCL_coexpression_mm9:1 |
Association with transcript: | 224bp_to_ENSMUST00000107165, uc009iip.1_5end |
EntrezGene: | Odz4 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
raphe nuclei neuron | 3.05e-09 | 3 |
neuron of the substantia nigra | 2.04e-08 | 3 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.