FFCP PHASE1:Mm9::chr7:147170458..147170467,-: Difference between revisions
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{{FFCP | {{FFCP|EntrezGene=NA|HGNC=|MCL_coexpression_id=142|UniProt=NA|association_with_transcript=NA|description=CAGE_peak_at_chr7:147170458..147170467,-|id=chr7:147170458..147170467,-|ontology_enrichment_celltype=CL:0000049!1.49e-08!19;CL:0000557!3.69e-07!7|ontology_enrichment_celltype_v019_2=CL:0000355,5.44e-13,9|ontology_enrichment_disease=DOID:0060100!4.15e-10!3;DOID:4045!4.15e-10!3|ontology_enrichment_disease_v019_2=DOID:0060100,2.80e-37,3;DOID:4045,2.80e-37,3;DOID:0050686,4.31e-19,6|ontology_enrichment_uberon=UBERON:0002204!1.45e-07!32|ontology_enrichment_uberon_v019_2=UBERON:0001134,5.44e-13,9;UBERON:0002036,5.44e-13,9;UBERON:0002385,5.44e-13,9;UBERON:0000486,5.44e-13,9;UBERON:0007503,5.44e-13,9;UBERON:0001015,5.44e-13,9;UBERON:0002329,5.44e-13,9;UBERON:0003082,5.44e-13,9;UBERON:0003059,5.44e-13,9;UBERON:0007282,5.44e-13,9;UBERON:0004290,5.44e-13,9;UBERON:0009618,5.44e-13,9;UBERON:0000383,9.13e-12,10;UBERON:0007524,9.23e-11,11;UBERON:0003077,9.23e-11,11;UBERON:0007285,9.23e-11,11|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.157731082679119,0.137114433605739,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,5.02237956884289,2.3440060335714,1.0470474879476,14.7057872007754,30.0540013381716,5.82612423637384,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.299600110518405,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.075726193333184,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.117588707135705,0,0,0.144599356919912,0.884610551949874,0,0,0,0,0,0,0,0.11981512450592,0,0.381210681219194,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.51469581422943,3.40996199274711,0.207125772535502,0,0,0,0,0,0,0,0.116765342367169,0,0,0,0,0,0,0,0.102904612379284,0,0,0,0,0,0,0,0,0,0,0,0.198956472041151,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.287696137450811,0.162135226775035,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.54390568381871,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.164549020602121,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.136694227721025,0,0,0.279902904647316,0.138199973804424,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.214368379079066,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.243106717068294,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.118635018124174,0,0,0,0,0,0,0,0.191288332068843,0,0|short_description=p@chr7:147170458..147170467,-}} | ||
|EntrezGene=NA | |||
|HGNC= | |||
|MCL_coexpression_id=142 | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|description=CAGE_peak_at_chr7:147170458..147170467,- | |||
|id=chr7:147170458..147170467,- | |||
|ontology_enrichment_celltype=CL:0000049!1.49e-08!19;CL:0000557!3.69e-07!7 | |||
|ontology_enrichment_celltype_v019_2=CL:0000355,5.44e-13,9 | |||
|ontology_enrichment_disease=DOID:0060100!4.15e-10!3;DOID:4045!4.15e-10!3 | |||
|ontology_enrichment_disease_v019_2=DOID:0060100,2.80e-37,3;DOID:4045,2.80e-37,3;DOID:0050686,4.31e-19,6 | |||
|ontology_enrichment_uberon=UBERON:0002204!1.45e-07!32 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001134,5.44e-13,9;UBERON:0002036,5.44e-13,9;UBERON:0002385,5.44e-13,9;UBERON:0000486,5.44e-13,9;UBERON:0007503,5.44e-13,9;UBERON:0001015,5.44e-13,9;UBERON:0002329,5.44e-13,9;UBERON:0003082,5.44e-13,9;UBERON:0003059,5.44e-13,9;UBERON:0007282,5.44e-13,9;UBERON:0004290,5.44e-13,9;UBERON:0009618,5.44e-13,9;UBERON:0000383,9.13e-12,10;UBERON:0007524,9.23e-11,11;UBERON:0003077,9.23e-11,11;UBERON:0007285,9.23e-11,11 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.157731082679119,0.137114433605739,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,5.02237956884289,2.3440060335714,1.0470474879476,14.7057872007754,30.0540013381716,5.82612423637384,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.299600110518405,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.075726193333184,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.117588707135705,0,0,0.144599356919912,0.884610551949874,0,0,0,0,0,0,0,0.11981512450592,0,0.381210681219194,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.51469581422943,3.40996199274711,0.207125772535502,0,0,0,0,0,0,0,0.116765342367169,0,0,0,0,0,0,0,0.102904612379284,0,0,0,0,0,0,0,0,0,0,0,0.198956472041151,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.287696137450811,0.162135226775035,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.54390568381871,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.164549020602121,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.136694227721025,0,0,0.279902904647316,0.138199973804424,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.214368379079066,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.243106717068294,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.118635018124174,0,0,0,0,0,0,0,0.191288332068843,0,0 | |||
|short_description=p@chr7:147170458..147170467,- | |||
}} |
Revision as of 12:12, 14 September 2013
Short description: | p@chr7:147170458..147170467, - |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr7:147170458..147170467, - |
Coexpression cluster: | MCL_coexpression_mm9:142 |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
multi-potent skeletal muscle stem cell | 5.44e-13 | 9 |
Ontology term | p-value | n |
---|---|---|
skeletal muscle tissue | 5.44e-13 | 9 |
striated muscle tissue | 5.44e-13 | 9 |
muscle tissue | 5.44e-13 | 9 |
multilaminar epithelium | 5.44e-13 | 9 |
epithelial vesicle | 5.44e-13 | 9 |
musculature | 5.44e-13 | 9 |
somite | 5.44e-13 | 9 |
myotome | 5.44e-13 | 9 |
presomitic mesoderm | 5.44e-13 | 9 |
presumptive segmental plate | 5.44e-13 | 9 |
dermomyotome | 5.44e-13 | 9 |
trunk paraxial mesoderm | 5.44e-13 | 9 |
musculature of body | 9.13e-12 | 10 |
dense mesenchyme tissue | 9.23e-11 | 11 |
paraxial mesoderm | 9.23e-11 | 11 |
presumptive paraxial mesoderm | 9.23e-11 | 11 |
Ontology term | p-value | n |
---|---|---|
musculoskeletal system cancer | 2.80e-37 | 3 |
muscle cancer | 2.80e-37 | 3 |
organ system cancer | 4.31e-19 | 6 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.