FFCP PHASE1:Mm9::chr7:148579082..148579085,+: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP|EntrezGene=NA|HGNC=|MCL_coexpression_id=6|UniProt=NA|association_with_transcript=NA|description=CAGE_peak_at_chr7:148579082..148579085,+|id=chr7:148579082..148579085,+|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019_2=CL:0000355,3.69e-15,9|ontology_enrichment_disease=DOID:0060100!3.17e-07!3;DOID:4045!3.17e-07!3|ontology_enrichment_disease_v019_2=DOID:0060100,1.25e-43,3;DOID:4045,1.25e-43,3;DOID:0050686,2.64e-22,6|ontology_enrichment_uberon=UBERON:0002106!5.26e-08!6;UBERON:0004457!5.26e-08!6;UBERON:0000042!5.26e-08!6;UBERON:0004854!5.26e-08!6;UBERON:0009034!5.26e-08!6;UBERON:0002095!5.26e-08!6;UBERON:0004782!5.26e-08!6;UBERON:0003281!5.26e-08!6;UBERON:0009664!5.26e-08!6;UBERON:0002296!5.26e-08!6;UBERON:0005602!5.26e-08!6;UBERON:0001179!5.26e-08!6;UBERON:0006293!5.26e-08!6|ontology_enrichment_uberon_v019_2=UBERON:0001134,3.69e-15,9;UBERON:0002036,3.69e-15,9;UBERON:0002385,3.69e-15,9;UBERON:0000486,3.69e-15,9;UBERON:0007503,3.69e-15,9;UBERON:0001015,3.69e-15,9;UBERON:0002329,3.69e-15,9;UBERON:0003082,3.69e-15,9;UBERON:0003059,3.69e-15,9;UBERON:0007282,3.69e-15,9;UBERON:0004290,3.69e-15,9;UBERON:0009618,3.69e-15,9;UBERON:0000383,1.00e-13,10;UBERON:0007524,1.50e-12,11;UBERON:0003077,1.50e-12,11;UBERON:0007285,1.50e-12,11|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.333109761815663,0.404950534779652,0,0.157731082679119,0,0,0,0,0,0.159992422793407,0,0,0,0,0,0,0,0,0,0,0,0,0,4.60384793810598,4.6880120671428,1.0470474879476,15.8822501768374,10.9287277593351,4.36959317728038,0,0.101376931219515,0,0,0.218025156380447,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.988866362566974,0,0,0,0,0.135005938331691,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.227178579999552,0.226714680320357,0,0,0,0,0,0,0.140444420131752,0,0,0,0,0,0,0,0,0,0,0,0,0,0.346970653532272,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.125654352112864,0,0,0,0,0,0.124406970610093,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.234526059981096,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.22237804384487,0,0,0,0,0.198956472041151,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.333690211432188,0.196558995113203,0.449724224769707,0.202860121388503,0.482354319504834,0.50925170356284,0.287696137450811,0.162135226775035,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.144649058581512,0,0,0,0,0,0,0,0,0,0,0,0,0.222798674082394,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.129358683782755,0.214337035031592,0,0,0,0,0,0.21183207086382,0,0,0,0,0,0,0,0,0.170870880797853,0.412773735926445,0.555583582109135,0.376736914009382,0,0.457556346413045,0,0,0.276399947608848,0,0,0,0,0,0,0,0.0826534557253359,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.335769232728157,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.798049746802062,0,0,0,0,0,0,0,0,0,0,0.0936415074698824,0,0,0,0.115884325944855,0,0,0,0,0.177475806159338,0,0,0.0941093804153306,0.0846146078916765,0,0,0,0,0,0,0.409231043169689,0,0,0,0.233931608445408,0,0,0,0|short_description=p@chr7:148579082..148579085,+}} | ||
|EntrezGene=NA | |||
|HGNC= | |||
|MCL_coexpression_id=6 | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|description=CAGE_peak_at_chr7:148579082..148579085,+ | |||
|id=chr7:148579082..148579085,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019_2=CL:0000355,3.69e-15,9 | |||
|ontology_enrichment_disease=DOID:0060100!3.17e-07!3;DOID:4045!3.17e-07!3 | |||
|ontology_enrichment_disease_v019_2=DOID:0060100,1.25e-43,3;DOID:4045,1.25e-43,3;DOID:0050686,2.64e-22,6 | |||
|ontology_enrichment_uberon=UBERON:0002106!5.26e-08!6;UBERON:0004457!5.26e-08!6;UBERON:0000042!5.26e-08!6;UBERON:0004854!5.26e-08!6;UBERON:0009034!5.26e-08!6;UBERON:0002095!5.26e-08!6;UBERON:0004782!5.26e-08!6;UBERON:0003281!5.26e-08!6;UBERON:0009664!5.26e-08!6;UBERON:0002296!5.26e-08!6;UBERON:0005602!5.26e-08!6;UBERON:0001179!5.26e-08!6;UBERON:0006293!5.26e-08!6 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001134,3.69e-15,9;UBERON:0002036,3.69e-15,9;UBERON:0002385,3.69e-15,9;UBERON:0000486,3.69e-15,9;UBERON:0007503,3.69e-15,9;UBERON:0001015,3.69e-15,9;UBERON:0002329,3.69e-15,9;UBERON:0003082,3.69e-15,9;UBERON:0003059,3.69e-15,9;UBERON:0007282,3.69e-15,9;UBERON:0004290,3.69e-15,9;UBERON:0009618,3.69e-15,9;UBERON:0000383,1.00e-13,10;UBERON:0007524,1.50e-12,11;UBERON:0003077,1.50e-12,11;UBERON:0007285,1.50e-12,11 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.333109761815663,0.404950534779652,0,0.157731082679119,0,0,0,0,0,0.159992422793407,0,0,0,0,0,0,0,0,0,0,0,0,0,4.60384793810598,4.6880120671428,1.0470474879476,15.8822501768374,10.9287277593351,4.36959317728038,0,0.101376931219515,0,0,0.218025156380447,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.988866362566974,0,0,0,0,0.135005938331691,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.227178579999552,0.226714680320357,0,0,0,0,0,0,0.140444420131752,0,0,0,0,0,0,0,0,0,0,0,0,0,0.346970653532272,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.125654352112864,0,0,0,0,0,0.124406970610093,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.234526059981096,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.22237804384487,0,0,0,0,0.198956472041151,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.333690211432188,0.196558995113203,0.449724224769707,0.202860121388503,0.482354319504834,0.50925170356284,0.287696137450811,0.162135226775035,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.144649058581512,0,0,0,0,0,0,0,0,0,0,0,0,0.222798674082394,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.129358683782755,0.214337035031592,0,0,0,0,0,0.21183207086382,0,0,0,0,0,0,0,0,0.170870880797853,0.412773735926445,0.555583582109135,0.376736914009382,0,0.457556346413045,0,0,0.276399947608848,0,0,0,0,0,0,0,0.0826534557253359,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.335769232728157,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.798049746802062,0,0,0,0,0,0,0,0,0,0,0.0936415074698824,0,0,0,0.115884325944855,0,0,0,0,0.177475806159338,0,0,0.0941093804153306,0.0846146078916765,0,0,0,0,0,0,0.409231043169689,0,0,0,0.233931608445408,0,0,0,0 | |||
|short_description=p@chr7:148579082..148579085,+ | |||
}} |
Revision as of 12:18, 14 September 2013
Short description: | p@chr7:148579082..148579085, + |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr7:148579082..148579085, + |
Coexpression cluster: | MCL_coexpression_mm9:6 |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
multi-potent skeletal muscle stem cell | 3.69e-15 | 9 |
Ontology term | p-value | n |
---|---|---|
skeletal muscle tissue | 3.69e-15 | 9 |
striated muscle tissue | 3.69e-15 | 9 |
muscle tissue | 3.69e-15 | 9 |
multilaminar epithelium | 3.69e-15 | 9 |
epithelial vesicle | 3.69e-15 | 9 |
musculature | 3.69e-15 | 9 |
somite | 3.69e-15 | 9 |
myotome | 3.69e-15 | 9 |
presomitic mesoderm | 3.69e-15 | 9 |
presumptive segmental plate | 3.69e-15 | 9 |
dermomyotome | 3.69e-15 | 9 |
trunk paraxial mesoderm | 3.69e-15 | 9 |
musculature of body | 1.00e-13 | 10 |
dense mesenchyme tissue | 1.50e-12 | 11 |
paraxial mesoderm | 1.50e-12 | 11 |
presumptive paraxial mesoderm | 1.50e-12 | 11 |
Ontology term | p-value | n |
---|---|---|
musculoskeletal system cancer | 1.25e-43 | 3 |
muscle cancer | 1.25e-43 | 3 |
organ system cancer | 2.64e-22 | 6 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.