FFCP PHASE1:Hg19::chrX:65253611..65253626,-: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=11326|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding|HGNC=17032|TSSclassifier=S|UniProt=|association_with_transcript=45bp_to_uc004dwl.2_5end|coexpression_cluster_id=C67|description=CAGE_peak_5_at_VSIG4_5end|id=chrX:65253611..65253626,-|ontology_enrichment_celltype=CL:0002619!6.43e-09!3;CL:0000235!8.28e-09!10;CL:0002194!1.69e-08!63;CL:0000576!1.69e-08!63;CL:0000040!1.69e-08!63;CL:0000559!1.69e-08!63;CL:0002009!4.23e-08!65;CL:0000839!3.31e-07!70;CL:0000766!4.33e-07!76;CL:0000557!4.81e-07!71|ontology_enrichment_celltype_v019=CL:0000235;3.16e-59;6!CL:0002619;4.82e-44;3!CL:0000473;8.48e-08;39!CL:0000234;8.48e-08;39|ontology_enrichment_celltype_v019_2=CL:0000235,3.36e-59,6;CL:0002619,4.49e-44,3;CL:0002194,1.19e-14,59;CL:0000576,1.19e-14,59;CL:0000040,1.19e-14,59;CL:0000559,1.19e-14,59;CL:0002009,3.72e-14,61;CL:0000839,4.77e-13,66;CL:0000557,7.61e-13,67;CL:0000766,6.45e-12,72;CL:0000763,9.90e-08,108;CL:0000049,9.90e-08,108;CL:0000473,1.94e-07,48;CL:0000234,1.94e-07,48;CL:0002087,3.24e-07,115;CL:0002031,6.95e-07,120|ontology_enrichment_development_v019=UBERON:0010115;2.56e-15;1|ontology_enrichment_disease=|ontology_enrichment_disease_v019=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0007023!4.99e-40!115;UBERON:0001049!1.34e-15!57;UBERON:0005068!1.34e-15!57;UBERON:0006241!1.34e-15!57;UBERON:0007135!1.34e-15!57;UBERON:0003080!1.70e-13!42;UBERON:0002780!3.42e-12!41;UBERON:0001890!3.42e-12!41;UBERON:0006240!3.42e-12!41;UBERON:0005743!3.56e-12!86;UBERON:0001017!4.81e-12!82;UBERON:0002616!5.96e-12!59;UBERON:0000073!2.18e-10!94;UBERON:0001016!2.18e-10!94;UBERON:0000955!2.34e-10!69;UBERON:0006238!2.34e-10!69;UBERON:0003075!2.78e-10!86;UBERON:0007284!2.78e-10!86;UBERON:0002346!1.51e-09!90;UBERON:0002791!4.07e-09!33;UBERON:0001871!5.67e-09!7;UBERON:0003056!6.74e-09!61;UBERON:0002020!6.77e-09!34;UBERON:0003528!6.77e-09!34;UBERON:0001893!9.12e-09!34;UBERON:0000062!2.39e-08!511;UBERON:0002298!5.17e-07!8;UBERON:0001869!7.09e-07!32;UBERON:0002771!8.21e-07!3|ontology_enrichment_uberon_v019=UBERON:0002363;2.56e-15;1!UBERON:0000029;2.56e-15;1!UBERON:0002360;2.57e-08;2!UBERON:0000094;2.57e-08;2!UBERON:0010743;2.57e-08;2|ontology_enrichment_uberon_v019_2=UBERON:0000029,1.78e-15,1;UBERON:0002363,3.66e-15,1;UBERON:0007645,3.66e-15,1;UBERON:0007647,3.66e-15,1;UBERON:0010115,3.66e-15,1;UBERON:0002405,1.71e-11,93;UBERON:0002371,2.93e-11,76;UBERON:0001474,2.16e-10,82;UBERON:0002193,8.76e-10,108;UBERON:0004765,2.06e-09,90;UBERON:0002390,1.37e-08,98;UBERON:0003061,1.37e-08,98;UBERON:0001434,2.10e-08,100;UBERON:0002360,3.08e-08,2;UBERON:0000094,3.08e-08,2;UBERON:0010743,3.08e-08,2|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.154816123316076,0,0,0,0,0,0,0,0,0,16.1219141452746,5.83008598834163,12.363627246441,0.145398238779565,0,0,0.232429036905685,0,0,0,0.256160706529101,0,0,0,0,0,0,0,0,0.320929027076094,0,0.329851300186716,0,0,0.580418477257168,0,0,0,0,0,0,0.368277635987565,0,0.211255286311942,0,0.209658645508376,0.112328631146495,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.150575119077773,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.261958150995425,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.20082107913617,0.234004265139238,3.71577905721821,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.86495122564762,5.52482800575339,2.10833939483032,0,0,0,0,0,0,0,0,0,0,0,0,0,0.167516265334349,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.215714200818617,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.54561517471583,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.60044461320525,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.191505370132367,0,0,0,0,0,0,0,0,0,0,0.687010689511529,0,0,0,0,0,0,0,0,0,0,1.46508179271894,0,0,0,0,0,0,0,0.281338832821026,0,0,0,0.398495976502139,0,0,0,0,0,0,0,0,0.0986434056369336,0,0,0,0.371072392647405,0,0,0,0.724999575434793,0,0,0,0,0,0,0,0.361789315876224,0,0,0,0,0,0,0.0769502585037971,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.619202951523374,0,0,0,0,0.134802265961354,0.802577647298789,0.468528891450678,0,0,0,0,0,0.30607276163049,1.01098527405581,0,0,0,0,0,0,0,0,0,0,0,0.17472666824203,0,0,0,0,0.290967049465258,0,0,0,0,0,0,0,0.426905989478705,0,0,0,0,0,0,0,0,0,0,0,0.600420288709789,0.273810757783986,0,0,0,0,0,0,0.599037001496973,0.858452096273142,0,0.0671834724867263,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.121499113316049,0,0.394028536495991,0.104909176269996,0,0,0,0,0.662091970365432,0,0,0,0,0,0,0,0,0.58620893471233,1.32506888912221,0,0.39669780522807,0,0,0.961086713109252,0,0.828478110694391,1.9846640872478,0,0,0,0,0,0,0,0,0,0.2440525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| ||
|DPIdataset=robustDPI | |||
|EntrezGene=11326 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=17032 | |||
|TSSclassifier=S | |||
|UniProt= | |||
|association_with_transcript=45bp_to_uc004dwl.2_5end | |||
|coexpression_cluster_id=C67 | |||
|description=CAGE_peak_5_at_VSIG4_5end | |||
|id=chrX:65253611..65253626,- | |||
|ontology_enrichment_celltype=CL:0002619!6.43e-09!3;CL:0000235!8.28e-09!10;CL:0002194!1.69e-08!63;CL:0000576!1.69e-08!63;CL:0000040!1.69e-08!63;CL:0000559!1.69e-08!63;CL:0002009!4.23e-08!65;CL:0000839!3.31e-07!70;CL:0000766!4.33e-07!76;CL:0000557!4.81e-07!71 | |||
|ontology_enrichment_celltype_v019=CL:0000235;3.16e-59;6!CL:0002619;4.82e-44;3!CL:0000473;8.48e-08;39!CL:0000234;8.48e-08;39 | |||
|ontology_enrichment_celltype_v019_2=CL:0000235,3.36e-59,6;CL:0002619,4.49e-44,3;CL:0002194,1.19e-14,59;CL:0000576,1.19e-14,59;CL:0000040,1.19e-14,59;CL:0000559,1.19e-14,59;CL:0002009,3.72e-14,61;CL:0000839,4.77e-13,66;CL:0000557,7.61e-13,67;CL:0000766,6.45e-12,72;CL:0000763,9.90e-08,108;CL:0000049,9.90e-08,108;CL:0000473,1.94e-07,48;CL:0000234,1.94e-07,48;CL:0002087,3.24e-07,115;CL:0002031,6.95e-07,120 | |||
|ontology_enrichment_development_v019=UBERON:0010115;2.56e-15;1 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!4.99e-40!115;UBERON:0001049!1.34e-15!57;UBERON:0005068!1.34e-15!57;UBERON:0006241!1.34e-15!57;UBERON:0007135!1.34e-15!57;UBERON:0003080!1.70e-13!42;UBERON:0002780!3.42e-12!41;UBERON:0001890!3.42e-12!41;UBERON:0006240!3.42e-12!41;UBERON:0005743!3.56e-12!86;UBERON:0001017!4.81e-12!82;UBERON:0002616!5.96e-12!59;UBERON:0000073!2.18e-10!94;UBERON:0001016!2.18e-10!94;UBERON:0000955!2.34e-10!69;UBERON:0006238!2.34e-10!69;UBERON:0003075!2.78e-10!86;UBERON:0007284!2.78e-10!86;UBERON:0002346!1.51e-09!90;UBERON:0002791!4.07e-09!33;UBERON:0001871!5.67e-09!7;UBERON:0003056!6.74e-09!61;UBERON:0002020!6.77e-09!34;UBERON:0003528!6.77e-09!34;UBERON:0001893!9.12e-09!34;UBERON:0000062!2.39e-08!511;UBERON:0002298!5.17e-07!8;UBERON:0001869!7.09e-07!32;UBERON:0002771!8.21e-07!3 | |||
|ontology_enrichment_uberon_v019=UBERON:0002363;2.56e-15;1!UBERON:0000029;2.56e-15;1!UBERON:0002360;2.57e-08;2!UBERON:0000094;2.57e-08;2!UBERON:0010743;2.57e-08;2 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000029,1.78e-15,1;UBERON:0002363,3.66e-15,1;UBERON:0007645,3.66e-15,1;UBERON:0007647,3.66e-15,1;UBERON:0010115,3.66e-15,1;UBERON:0002405,1.71e-11,93;UBERON:0002371,2.93e-11,76;UBERON:0001474,2.16e-10,82;UBERON:0002193,8.76e-10,108;UBERON:0004765,2.06e-09,90;UBERON:0002390,1.37e-08,98;UBERON:0003061,1.37e-08,98;UBERON:0001434,2.10e-08,100;UBERON:0002360,3.08e-08,2;UBERON:0000094,3.08e-08,2;UBERON:0010743,3.08e-08,2 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.154816123316076,0,0,0,0,0,0,0,0,0,16.1219141452746,5.83008598834163,12.363627246441,0.145398238779565,0,0,0.232429036905685,0,0,0,0.256160706529101,0,0,0,0,0,0,0,0,0.320929027076094,0,0.329851300186716,0,0,0.580418477257168,0,0,0,0,0,0,0.368277635987565,0,0.211255286311942,0,0.209658645508376,0.112328631146495,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.150575119077773,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.261958150995425,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.20082107913617,0.234004265139238,3.71577905721821,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.86495122564762,5.52482800575339,2.10833939483032,0,0,0,0,0,0,0,0,0,0,0,0,0,0.167516265334349,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.215714200818617,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.54561517471583,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.60044461320525,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.191505370132367,0,0,0,0,0,0,0,0,0,0,0.687010689511529,0,0,0,0,0,0,0,0,0,0,1.46508179271894,0,0,0,0,0,0,0,0.281338832821026,0,0,0,0.398495976502139,0,0,0,0,0,0,0,0,0.0986434056369336,0,0,0,0.371072392647405,0,0,0,0.724999575434793,0,0,0,0,0,0,0,0.361789315876224,0,0,0,0,0,0,0.0769502585037971,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.619202951523374,0,0,0,0,0.134802265961354,0.802577647298789,0.468528891450678,0,0,0,0,0,0.30607276163049,1.01098527405581,0,0,0,0,0,0,0,0,0,0,0,0.17472666824203,0,0,0,0,0.290967049465258,0,0,0,0,0,0,0,0.426905989478705,0,0,0,0,0,0,0,0,0,0,0,0.600420288709789,0.273810757783986,0,0,0,0,0,0,0.599037001496973,0.858452096273142,0,0.0671834724867263,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.121499113316049,0,0.394028536495991,0.104909176269996,0,0,0,0,0.662091970365432,0,0,0,0,0,0,0,0,0.58620893471233,1.32506888912221,0,0.39669780522807,0,0,0.961086713109252,0,0.828478110694391,1.9846640872478,0,0,0,0,0,0,0,0,0,0.244052529803926,0.1251909307065,0,0.554645257684261,0.18628920882415,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.138258436151731,0,0,0,0,0,0,0,0.106691729694141,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.319267718114302,0,0.252071696221718,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.336283722218824,0,0.455324382702595,0.443511850813194,0,0,0,0,0,0,0.078493092850514,0,0,0,0,0,0.0714765441766563,0,0,0,0,0,0,0,0.430227358820278,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.540219106755613,0,0,0,0,0,0.594092800654172,0.4226557275834,0,0.187967835959707,0.0644578879735772,0,0,0,0,0,0,0.143339583151451,0,0.0679914901909147,0,0,0,0,0,0,0,0,0,0,0,0,0.303114792872958,0.267964130156178,0,0.103432995861895,0.213233981900981,0,0,0.186224142887574,0,0.318235791390825,0,0.435433495793923,0,0,0.358611026963382,0.332660356546013,0,0,0,0,0,0,0,0,0.201273793591026,0 | |||
|short_description=p5@VSIG4 | |||
}} |
Revision as of 12:21, 14 September 2013
Short description: | p5@VSIG4 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_5_at_VSIG4_5end |
Coexpression cluster: | C67_CD14_Monocytederived_Macrophage_dura_Dendritic_spleen_lung |
Association with transcript: | 45bp_to_uc004dwl.2_5end |
EntrezGene: | VSIG4 |
HGNC: | 17032 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
macrophage | 3.36e-59 | 6 |
adult endothelial progenitor cell | 4.49e-44 | 3 |
monopoietic cell | 1.19e-14 | 59 |
monocyte | 1.19e-14 | 59 |
monoblast | 1.19e-14 | 59 |
promonocyte | 1.19e-14 | 59 |
macrophage dendritic cell progenitor | 3.72e-14 | 61 |
myeloid lineage restricted progenitor cell | 4.77e-13 | 66 |
granulocyte monocyte progenitor cell | 7.61e-13 | 67 |
myeloid leukocyte | 6.45e-12 | 72 |
myeloid cell | 9.90e-08 | 108 |
common myeloid progenitor | 9.90e-08 | 108 |
defensive cell | 1.94e-07 | 48 |
phagocyte | 1.94e-07 | 48 |
nongranular leukocyte | 3.24e-07 | 115 |
hematopoietic lineage restricted progenitor cell | 6.95e-07 | 120 |
Ontology term | p-value | n |
---|---|---|
lymph node | 1.78e-15 | 1 |
dura mater | 3.66e-15 | 1 |
future meninx | 3.66e-15 | 1 |
ectomeninx | 3.66e-15 | 1 |
future dura mater | 3.66e-15 | 1 |
immune system | 1.71e-11 | 93 |
bone marrow | 2.93e-11 | 76 |
bone element | 2.16e-10 | 82 |
hemolymphoid system | 8.76e-10 | 108 |
skeletal element | 2.06e-09 | 90 |
hematopoietic system | 1.37e-08 | 98 |
blood island | 1.37e-08 | 98 |
skeletal system | 2.10e-08 | 100 |
meninx | 3.08e-08 | 2 |
membrane organ | 3.08e-08 | 2 |
meningeal cluster | 3.08e-08 | 2 |
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