FFCP PHASE1:Mm9::chr7:26173990..26174003,-: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP|EntrezGene=16890|HGNC=|MCL_coexpression_id=1753|UniProt=Q8CDI9|association_with_transcript=239bp_to_uc009fsp.1_5end|description=CAGE_peak_8_at_Lipe_5end|id=chr7:26173990..26174003,-|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019_2=|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0005153!9.56e-08!17|ontology_enrichment_uberon_v019_2=UBERON:0004535,3.10e-09,23;UBERON:0001009,3.10e-09,23;UBERON:0007100,1.95e-08,18;UBERON:0000948,1.95e-08,18;UBERON:0005498,1.95e-08,18;UBERON:0004140,1.95e-08,18;UBERON:0009881,1.95e-08,18;UBERON:0004141,1.95e-08,18;UBERON:0003084,1.95e-08,18;UBERON:0007005,1.95e-08,18;UBERON:0004139,1.95e-08,18;UBERON:0004291,1.95e-08,18;UBERON:0001374,2.43e-07,1;UBERON:0004252,2.43e-07,1;UBERON:0003663,2.43e-07,1;UBERON:0005090,2.43e-07,1;UBERON:0001630,2.43e-07,1;UBERON:0003661,2.43e-07,1;UBERON:0010890,2.43e-07,1;UBERON:0001383,2.43e-07,1;UBERON:0001723,4.83e-07,1;UBERON:0001033,4.83e-07,1;UBERON:0010056,4.83e-07,1;UBERON:0002048,7.35e-07,14;UBERON:0000117,7.35e-07,14;UBERON:0000171,7.35e-07,14;UBERON:0000170,7.35e-07,14;UBERON:0005597,7.35e-07,14;UBERON:0000118,7.35e-07,14|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.19060606211498,0,0,0,0,0,0,0,0,0.252030129759931,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.202316460859598,0,0,0,0,0,0,0,0,0,0,0,0,0,0.441737081903227,0,0,0,0,0.255374676170375,0,0,0.0914876436024097,0,0.279182999001381,0,0,0,0.142371680799103,0,0.075726193333184,0,0,0,0,0,0,0,0.421333260395256,0,0,0,0,0,0,0,0,0,0,0.45673551887624,0.258937883647172,0,0,0,0.230615497256059,0.150722640552623,0,0.628332956648377,0.988779870937496,2.89198713839823,0,0.323533699894818,0.662524555381181,0.484875253135222,0,0,0.209446706813455,0.255457055208591,0,0,0,0.299581278809645,0,0,0.347648640384553,0,0,0.486723789203273,0.101839363850316,0.497627882440372,0,0.210441855886474,0,0,0,0,0,0,0,0.258703370739016,0,0,0,0,0,0,0.205782136407943,0,0,0,0,0,0,0,0,0,0.308534225774757,0.232533944750408,0.536546802799238,0.934122738937356,0.658239399653922,1.64167464079095,3.89130285820108,3.36259971078264,1.53685080703735,5.2340503316545,0,0.102904612379284,0,0,0,0,0,0,0,0,0,0.494096864172033,0,0.198956472041151,0.19496408711912,0,0.216138049874694,0.199141273254367,0,0,0,0,0,0.0701358198903186,0,0.590440591918409,0.156998727841375,0.616985819609003,0,0,0,0,0,0,0,0,0,0,0,0,0.624075346229121,0,0.179397413521912,0,1.10851914099963,0,0,0,0.234690248288502,0.167506257441816,0.238043640886014,1.36593553500459,0.788175720530955,0.44292937929755,0.478364305972461,1.14704320301017,0.863424909329478,2.89298117163023,0,0,0.983528546038072,0.551873492609465,0.160550589987792,0.234423373184406,0,2.52470927204373,0,0,0,0,0,0,0,0,0,0.321321316421807,0,0,0,0.164970122972535,0,0,0,0,0.295301892880773,0.307435147943927,0.258428293168221,0,0,0.316036757935816,2.10837217149998,0,0,0,0,0,0,0,0.164549020602121,0,0,0,0.220528398054962,0.32977250588296,0.645857706783622,0.120625849856312,0.358117032009409,0,0,0.18542530201051,0,0,0,0,0,0,0,0,0,0.954670618015114,0,0,0,0,0,0,0.330613822901344,0.523511883968059,0.259229946583586,0,0,0,0,0,0,0,0,0.13020438484395,0,0,0.864090018773596,0,0,0.102710957164827,0.129920822977795,0.179026695667481,0.198681354781265,0,0,0,0,0.100826185136841,0,0.0962118416403295,0.116876902181569,1.36038230169127,0,0,0,0.386379188064381,0.187682475451182,0.183151624267265,0.214368379079066,0,0,0,0.572895513439397,0,0,0,0,0,0,0,0,0,0,0,0,0,0.666740183404846,0.206035057238894,0,0.252697211763798,0.25347929989024,0.188626341386076,0,0.384150914429216,0.229741875822453,0.476293691283074,0.347652977834566,0.578727661391115,0,0,0,0.177475806159338,0.476872379894642,0,0.0941093804153306,0.25384382367503,0.548783918618318,0.263069711437843,0.271608227691724,0,0,0.197008964751127,0,0.154936841185966,0.385813221962283,0.249810577937946,0.467863216890817,0,0.765153328275374,1.10295709559758,0.463735671240843|short_description=p8@Lipe}} | ||
|EntrezGene=16890 | |||
|HGNC= | |||
|MCL_coexpression_id=1753 | |||
|UniProt=Q8CDI9 | |||
|association_with_transcript=239bp_to_uc009fsp.1_5end | |||
|description=CAGE_peak_8_at_Lipe_5end | |||
|id=chr7:26173990..26174003,- | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0005153!9.56e-08!17 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0004535,3.10e-09,23;UBERON:0001009,3.10e-09,23;UBERON:0007100,1.95e-08,18;UBERON:0000948,1.95e-08,18;UBERON:0005498,1.95e-08,18;UBERON:0004140,1.95e-08,18;UBERON:0009881,1.95e-08,18;UBERON:0004141,1.95e-08,18;UBERON:0003084,1.95e-08,18;UBERON:0007005,1.95e-08,18;UBERON:0004139,1.95e-08,18;UBERON:0004291,1.95e-08,18;UBERON:0001374,2.43e-07,1;UBERON:0004252,2.43e-07,1;UBERON:0003663,2.43e-07,1;UBERON:0005090,2.43e-07,1;UBERON:0001630,2.43e-07,1;UBERON:0003661,2.43e-07,1;UBERON:0010890,2.43e-07,1;UBERON:0001383,2.43e-07,1;UBERON:0001723,4.83e-07,1;UBERON:0001033,4.83e-07,1;UBERON:0010056,4.83e-07,1;UBERON:0002048,7.35e-07,14;UBERON:0000117,7.35e-07,14;UBERON:0000171,7.35e-07,14;UBERON:0000170,7.35e-07,14;UBERON:0005597,7.35e-07,14;UBERON:0000118,7.35e-07,14 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.19060606211498,0,0,0,0,0,0,0,0,0.252030129759931,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.202316460859598,0,0,0,0,0,0,0,0,0,0,0,0,0,0.441737081903227,0,0,0,0,0.255374676170375,0,0,0.0914876436024097,0,0.279182999001381,0,0,0,0.142371680799103,0,0.075726193333184,0,0,0,0,0,0,0,0.421333260395256,0,0,0,0,0,0,0,0,0,0,0.45673551887624,0.258937883647172,0,0,0,0.230615497256059,0.150722640552623,0,0.628332956648377,0.988779870937496,2.89198713839823,0,0.323533699894818,0.662524555381181,0.484875253135222,0,0,0.209446706813455,0.255457055208591,0,0,0,0.299581278809645,0,0,0.347648640384553,0,0,0.486723789203273,0.101839363850316,0.497627882440372,0,0.210441855886474,0,0,0,0,0,0,0,0.258703370739016,0,0,0,0,0,0,0.205782136407943,0,0,0,0,0,0,0,0,0,0.308534225774757,0.232533944750408,0.536546802799238,0.934122738937356,0.658239399653922,1.64167464079095,3.89130285820108,3.36259971078264,1.53685080703735,5.2340503316545,0,0.102904612379284,0,0,0,0,0,0,0,0,0,0.494096864172033,0,0.198956472041151,0.19496408711912,0,0.216138049874694,0.199141273254367,0,0,0,0,0,0.0701358198903186,0,0.590440591918409,0.156998727841375,0.616985819609003,0,0,0,0,0,0,0,0,0,0,0,0,0.624075346229121,0,0.179397413521912,0,1.10851914099963,0,0,0,0.234690248288502,0.167506257441816,0.238043640886014,1.36593553500459,0.788175720530955,0.44292937929755,0.478364305972461,1.14704320301017,0.863424909329478,2.89298117163023,0,0,0.983528546038072,0.551873492609465,0.160550589987792,0.234423373184406,0,2.52470927204373,0,0,0,0,0,0,0,0,0,0.321321316421807,0,0,0,0.164970122972535,0,0,0,0,0.295301892880773,0.307435147943927,0.258428293168221,0,0,0.316036757935816,2.10837217149998,0,0,0,0,0,0,0,0.164549020602121,0,0,0,0.220528398054962,0.32977250588296,0.645857706783622,0.120625849856312,0.358117032009409,0,0,0.18542530201051,0,0,0,0,0,0,0,0,0,0.954670618015114,0,0,0,0,0,0,0.330613822901344,0.523511883968059,0.259229946583586,0,0,0,0,0,0,0,0,0.13020438484395,0,0,0.864090018773596,0,0,0.102710957164827,0.129920822977795,0.179026695667481,0.198681354781265,0,0,0,0,0.100826185136841,0,0.0962118416403295,0.116876902181569,1.36038230169127,0,0,0,0.386379188064381,0.187682475451182,0.183151624267265,0.214368379079066,0,0,0,0.572895513439397,0,0,0,0,0,0,0,0,0,0,0,0,0,0.666740183404846,0.206035057238894,0,0.252697211763798,0.25347929989024,0.188626341386076,0,0.384150914429216,0.229741875822453,0.476293691283074,0.347652977834566,0.578727661391115,0,0,0,0.177475806159338,0.476872379894642,0,0.0941093804153306,0.25384382367503,0.548783918618318,0.263069711437843,0.271608227691724,0,0,0.197008964751127,0,0.154936841185966,0.385813221962283,0.249810577937946,0.467863216890817,0,0.765153328275374,1.10295709559758,0.463735671240843 | |||
|short_description=p8@Lipe | |||
}} |
Revision as of 12:53, 14 September 2013
Short description: | p8@Lipe |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_8_at_Lipe_5end |
Coexpression cluster: | MCL_coexpression_mm9:1753 |
Association with transcript: | 239bp_to_uc009fsp.1_5end |
EntrezGene: | Lipe |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
cardiovascular system | 3.10e-09 | 23 |
circulatory system | 3.10e-09 | 23 |
primary circulatory organ | 1.95e-08 | 18 |
heart | 1.95e-08 | 18 |
primitive heart tube | 1.95e-08 | 18 |
primary heart field | 1.95e-08 | 18 |
anterior lateral plate mesoderm | 1.95e-08 | 18 |
heart tube | 1.95e-08 | 18 |
heart primordium | 1.95e-08 | 18 |
cardiac mesoderm | 1.95e-08 | 18 |
cardiogenic plate | 1.95e-08 | 18 |
heart rudiment | 1.95e-08 | 18 |
biceps femoris | 2.43e-07 | 1 |
hindlimb stylopod muscle | 2.43e-07 | 1 |
hindlimb muscle | 2.43e-07 | 1 |
muscle structure | 2.43e-07 | 1 |
muscle organ | 2.43e-07 | 1 |
limb muscle | 2.43e-07 | 1 |
pelvic complex muscle | 2.43e-07 | 1 |
muscle of leg | 2.43e-07 | 1 |
tongue | 4.83e-07 | 1 |
gustatory system | 4.83e-07 | 1 |
future tongue | 4.83e-07 | 1 |
lung | 7.35e-07 | 14 |
respiratory tube | 7.35e-07 | 14 |
respiration organ | 7.35e-07 | 14 |
pair of lungs | 7.35e-07 | 14 |
lung primordium | 7.35e-07 | 14 |
lung bud | 7.35e-07 | 14 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.