FFCP PHASE1:Mm9::chr7:52721841..52721857,-: Difference between revisions
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{{FFCP | {{FFCP|EntrezGene=12028|HGNC=|MCL_coexpression_id=2239|UniProt=Q8K3J2|association_with_transcript=287bp_to_ENSMUST00000169539,uc009gvh.1_5end|description=CAGE_peak_7_at_Bax_5end|id=chr7:52721841..52721857,-|ontology_enrichment_celltype=CL:0000548!8.88e-12!115;CL:0000004!8.88e-12!115;CL:0000255!8.88e-12!115;CL:0002371!5.47e-11!118;CL:0000144!6.54e-11!121;CL:0000012!6.54e-11!121;CL:0000034!9.34e-10!97;CL:0000107!1.02e-09!9;CL:0000219!2.41e-09!54;CL:0000055!1.50e-08!50;CL:0000723!2.96e-08!91;CL:0000048!2.96e-08!91;CL:0000222!5.11e-07!7|ontology_enrichment_celltype_v019_2=CL:0000107,8.77e-24,9;CL:0000034,2.25e-20,97;CL:0000723,4.31e-17,91;CL:0000048,4.31e-17,91;CL:0000680,1.20e-10,6;CL:0000187,1.20e-10,6;CL:0000056,1.20e-10,6;CL:0000393,1.24e-10,39;CL:0000211,1.24e-10,39;CL:0002321,1.92e-09,70;CL:0000222,4.44e-09,7;CL:0002092,5.10e-09,3;CL:0002540,5.10e-09,3;CL:0000349,8.29e-09,3;CL:0000351,8.29e-09,3;CL:0000219,1.24e-08,54;CL:0000764,1.91e-08,3;CL:0000765,1.91e-08,3;CL:0000038,1.91e-08,3;CL:0000547,1.91e-08,3;CL:0000151,2.42e-08,3;CL:0000499,2.42e-08,3;CL:0000327,2.42e-08,3;CL:0002320,5.22e-08,46;CL:0000134,5.22e-08,46;CL:0000192,6.80e-08,3;CL:0000359,6.80e-08,3;CL:0002539,6.80e-08,3;CL:0000514,6.80e-08,3;CL:0000355,5.48e-07,9|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=DOID:2531,1.91e-08,3;DOID:0060083,1.91e-08,3;DOID:1240,1.91e-08,3|ontology_enrichment_uberon=UBERON:0000010!5.27e-11!11;UBERON:0002410!1.02e-09!9|ontology_enrichment_uberon_v019_2=UBERON:0002410,8.77e-24,9;UBERON:0000010,3.67e-23,11;UBERON:0000013,1.56e-09,3;UBERON:0010313,7.35e-09,3;UBERON:0002342,7.35e-09,3;UBERON:0002005,7.35e-09,3;UBERON:0005428,7.35e-09,3;UBERON:0005062,7.35e-09,3;UBERON:0000358,8.29e-09,3;UBERON:0000307,8.29e-09,3;UBERON:0007010,8.29e-09,3;UBERON:0000011,1.34e-08,3;UBERON:0002384,5.22e-08,46;UBERON:0001135,6.80e-08,3;UBERON:0004237,6.80e-08,3;UBERON:0004695,6.80e-08,3;UBERON:0002111,6.80e-08,3;UBERON:0004178,6.80e-08,3;UBERON:0002204,9.23e-08,32;UBERON:0001134,5.48e-07,9;UBERON:0002036,5.48e-07,9;UBERON:0002385,5.48e-07,9;UBERON:0000486,5.48e-07,9;UBERON:0007503,5.48e-07,9;UBERON:0001015,5.48e-07,9;UBERON:0002329,5.48e-07,9;UBERON:0003082,5.48e-07,9;UBERON:0003059,5.48e-07,9;UBERON:0007282,5.48e-07,9;UBERON:0004290,5.48e-07,9;UBERON:0009618,5.48e-07,9|phase1_expression=0.480446541314382,0,0,0,0,0,0,0,0.140788722151667,0,0.34243593645101,0.0797721589953364,0,0,0,0,0,0,0,0,0,1.48936426801328,1.30599894569468,0.159992422793407,0.45881856213434,0,0,0,0,0,0,1.27006134691926,2.46025915033828,15.8481681015439,0,0,0,0,0,0,0,0,0,1.76255545165808,1.52065396829272,2.20256102594018,2.34717403304412,0.218025156380447,0.878744730937887,0.777719596297134,0.699932108126813,0,0.167782606057736,0.725362142011344,0,5.40244815675489,0.85960031981627,3.09403255366465,0.202316460859598,0,0,4.74382344896785,1.77858959222228,2.6996991518442,3.9554654502679,7.8152812644071,4.19440154725767,0.768436610643109,0,0,0,0,0,0.122490799214954,0,0,0,0,0,0,0,0,0,0,0,0,0.142371680799103,0,0.681535739998656,1.28471652181535,0.869593466105033,1.72084775396277,0,0,0,0,0,0.170430322578058,0.519572009205738,0.70667914902068,0,0,0,0,1.29894624606728,2.02687892380079,0.505524445014783,0.11418387971906,0,0,0,0,0.230615497256059,0,0,0.251333182659351,0.247194967734374,0,0,0,0,0,0,0,0,0,0.11981512450592,0,0.254140454146129,0,0,0.125654352112864,0,0,0,0,0,0.124406970610093,0,0,0,0.229902104433473,0,0.150704817835715,0.136072998302656,0,0.0937017245597288,0,0,0,0,0,0,0,0,0,0,0,0,0.207125772535502,0.234526059981096,0,0,0,0,0,0,0.116765342367169,0,0,0,0,0,0,0,0.102904612379284,0,0,0,0,0.128867461322093,0.201683524623343,0,0,0,0,0,0.198956472041151,0.19496408711912,0,0.216138049874694,0,0.379335801906163,0.114248512609729,0,0,0,0.280543279561274,0,0,0,0,0,0,0,0,0.202860121388503,0.241177159752417,0,0.575392274901621,0.162135226775035,0,0,0,0.312037673114561,0.252578877947112,0,0,0,0.37898282354097,0.162964976442026,0,0,0,0.238043640886014,0,0.157635144106191,0,0.318909537314974,0,0,0.144649058581512,1.50791283939272,1.63171705145613,0,0,0,0.117211686592203,0.163934945376675,0,4.73262329124385,5.0757036758563,1.93881057959519,2.62865677747807,4.23317480756549,2.26461224631066,8.50102473517278,7.01414058987149,4.74345333535828,0.321321316421807,0,0,0,0,0,0,0,0.188605079755898,0,0,0,0,0,0,0,0,0,0.18006109403131,0,0.214337035031592,0,0.178368817602071,0,0.304464949114599,0.704015124191131,0.21183207086382,0,0,0.161464426695906,0,0.119372344003136,0,0,0,0.170870880797853,0,0,0,0,0,0.339956859987711,0,0,0,0,0.203319467126849,0,0.209088296014469,0,0,0.0826534557253359,0,0,0,0,0.448549638131936,0,0,0,0,0,0,0,0,0,0,0.202725215290164,0,0,0.179026695667481,0,0,0.147689527174577,0,0,0.100826185136841,0,0,0.116876902181569,0,3.99574716073316,3.94740969081693,3.69346156000973,0.19318959403219,0.187682475451182,0,0,0,0,0,0,0.171853182343688,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.128050304809739,0,0,0,0,0,0,0,0,0.238436189947321,0,0,0,0,0,0,0,0.118635018124174,0,0.409231043169689,0,0,0,0,0,0,0,0|short_description=p7@Bax}} | ||
|EntrezGene=12028 | |||
|HGNC= | |||
|MCL_coexpression_id=2239 | |||
|UniProt=Q8K3J2 | |||
|association_with_transcript=287bp_to_ENSMUST00000169539,uc009gvh.1_5end | |||
|description=CAGE_peak_7_at_Bax_5end | |||
|id=chr7:52721841..52721857,- | |||
|ontology_enrichment_celltype=CL:0000548!8.88e-12!115;CL:0000004!8.88e-12!115;CL:0000255!8.88e-12!115;CL:0002371!5.47e-11!118;CL:0000144!6.54e-11!121;CL:0000012!6.54e-11!121;CL:0000034!9.34e-10!97;CL:0000107!1.02e-09!9;CL:0000219!2.41e-09!54;CL:0000055!1.50e-08!50;CL:0000723!2.96e-08!91;CL:0000048!2.96e-08!91;CL:0000222!5.11e-07!7 | |||
|ontology_enrichment_celltype_v019_2=CL:0000107,8.77e-24,9;CL:0000034,2.25e-20,97;CL:0000723,4.31e-17,91;CL:0000048,4.31e-17,91;CL:0000680,1.20e-10,6;CL:0000187,1.20e-10,6;CL:0000056,1.20e-10,6;CL:0000393,1.24e-10,39;CL:0000211,1.24e-10,39;CL:0002321,1.92e-09,70;CL:0000222,4.44e-09,7;CL:0002092,5.10e-09,3;CL:0002540,5.10e-09,3;CL:0000349,8.29e-09,3;CL:0000351,8.29e-09,3;CL:0000219,1.24e-08,54;CL:0000764,1.91e-08,3;CL:0000765,1.91e-08,3;CL:0000038,1.91e-08,3;CL:0000547,1.91e-08,3;CL:0000151,2.42e-08,3;CL:0000499,2.42e-08,3;CL:0000327,2.42e-08,3;CL:0002320,5.22e-08,46;CL:0000134,5.22e-08,46;CL:0000192,6.80e-08,3;CL:0000359,6.80e-08,3;CL:0002539,6.80e-08,3;CL:0000514,6.80e-08,3;CL:0000355,5.48e-07,9 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2=DOID:2531,1.91e-08,3;DOID:0060083,1.91e-08,3;DOID:1240,1.91e-08,3 | |||
|ontology_enrichment_uberon=UBERON:0000010!5.27e-11!11;UBERON:0002410!1.02e-09!9 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002410,8.77e-24,9;UBERON:0000010,3.67e-23,11;UBERON:0000013,1.56e-09,3;UBERON:0010313,7.35e-09,3;UBERON:0002342,7.35e-09,3;UBERON:0002005,7.35e-09,3;UBERON:0005428,7.35e-09,3;UBERON:0005062,7.35e-09,3;UBERON:0000358,8.29e-09,3;UBERON:0000307,8.29e-09,3;UBERON:0007010,8.29e-09,3;UBERON:0000011,1.34e-08,3;UBERON:0002384,5.22e-08,46;UBERON:0001135,6.80e-08,3;UBERON:0004237,6.80e-08,3;UBERON:0004695,6.80e-08,3;UBERON:0002111,6.80e-08,3;UBERON:0004178,6.80e-08,3;UBERON:0002204,9.23e-08,32;UBERON:0001134,5.48e-07,9;UBERON:0002036,5.48e-07,9;UBERON:0002385,5.48e-07,9;UBERON:0000486,5.48e-07,9;UBERON:0007503,5.48e-07,9;UBERON:0001015,5.48e-07,9;UBERON:0002329,5.48e-07,9;UBERON:0003082,5.48e-07,9;UBERON:0003059,5.48e-07,9;UBERON:0007282,5.48e-07,9;UBERON:0004290,5.48e-07,9;UBERON:0009618,5.48e-07,9 | |||
|phase1_expression=0.480446541314382,0,0,0,0,0,0,0,0.140788722151667,0,0.34243593645101,0.0797721589953364,0,0,0,0,0,0,0,0,0,1.48936426801328,1.30599894569468,0.159992422793407,0.45881856213434,0,0,0,0,0,0,1.27006134691926,2.46025915033828,15.8481681015439,0,0,0,0,0,0,0,0,0,1.76255545165808,1.52065396829272,2.20256102594018,2.34717403304412,0.218025156380447,0.878744730937887,0.777719596297134,0.699932108126813,0,0.167782606057736,0.725362142011344,0,5.40244815675489,0.85960031981627,3.09403255366465,0.202316460859598,0,0,4.74382344896785,1.77858959222228,2.6996991518442,3.9554654502679,7.8152812644071,4.19440154725767,0.768436610643109,0,0,0,0,0,0.122490799214954,0,0,0,0,0,0,0,0,0,0,0,0,0.142371680799103,0,0.681535739998656,1.28471652181535,0.869593466105033,1.72084775396277,0,0,0,0,0,0.170430322578058,0.519572009205738,0.70667914902068,0,0,0,0,1.29894624606728,2.02687892380079,0.505524445014783,0.11418387971906,0,0,0,0,0.230615497256059,0,0,0.251333182659351,0.247194967734374,0,0,0,0,0,0,0,0,0,0.11981512450592,0,0.254140454146129,0,0,0.125654352112864,0,0,0,0,0,0.124406970610093,0,0,0,0.229902104433473,0,0.150704817835715,0.136072998302656,0,0.0937017245597288,0,0,0,0,0,0,0,0,0,0,0,0,0.207125772535502,0.234526059981096,0,0,0,0,0,0,0.116765342367169,0,0,0,0,0,0,0,0.102904612379284,0,0,0,0,0.128867461322093,0.201683524623343,0,0,0,0,0,0.198956472041151,0.19496408711912,0,0.216138049874694,0,0.379335801906163,0.114248512609729,0,0,0,0.280543279561274,0,0,0,0,0,0,0,0,0.202860121388503,0.241177159752417,0,0.575392274901621,0.162135226775035,0,0,0,0.312037673114561,0.252578877947112,0,0,0,0.37898282354097,0.162964976442026,0,0,0,0.238043640886014,0,0.157635144106191,0,0.318909537314974,0,0,0.144649058581512,1.50791283939272,1.63171705145613,0,0,0,0.117211686592203,0.163934945376675,0,4.73262329124385,5.0757036758563,1.93881057959519,2.62865677747807,4.23317480756549,2.26461224631066,8.50102473517278,7.01414058987149,4.74345333535828,0.321321316421807,0,0,0,0,0,0,0,0.188605079755898,0,0,0,0,0,0,0,0,0,0.18006109403131,0,0.214337035031592,0,0.178368817602071,0,0.304464949114599,0.704015124191131,0.21183207086382,0,0,0.161464426695906,0,0.119372344003136,0,0,0,0.170870880797853,0,0,0,0,0,0.339956859987711,0,0,0,0,0.203319467126849,0,0.209088296014469,0,0,0.0826534557253359,0,0,0,0,0.448549638131936,0,0,0,0,0,0,0,0,0,0,0.202725215290164,0,0,0.179026695667481,0,0,0.147689527174577,0,0,0.100826185136841,0,0,0.116876902181569,0,3.99574716073316,3.94740969081693,3.69346156000973,0.19318959403219,0.187682475451182,0,0,0,0,0,0,0.171853182343688,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.128050304809739,0,0,0,0,0,0,0,0,0.238436189947321,0,0,0,0,0,0,0,0.118635018124174,0,0.409231043169689,0,0,0,0,0,0,0,0 | |||
|short_description=p7@Bax | |||
}} |
Revision as of 13:46, 14 September 2013
Short description: | p7@Bax |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_7_at_Bax_5end |
Coexpression cluster: | MCL_coexpression_mm9:2239 |
Association with transcript: | 287bp_to_ENSMUST00000169539, uc009gvh.1_5end |
EntrezGene: | Bax |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
autonomic neuron | 8.77e-24 | 9 |
stem cell | 2.25e-20 | 97 |
somatic stem cell | 4.31e-17 | 91 |
multi fate stem cell | 4.31e-17 | 91 |
muscle precursor cell | 1.20e-10 | 6 |
muscle cell | 1.20e-10 | 6 |
myoblast | 1.20e-10 | 6 |
electrically responsive cell | 1.24e-10 | 39 |
electrically active cell | 1.24e-10 | 39 |
embryonic cell | 1.92e-09 | 70 |
mesodermal cell | 4.44e-09 | 7 |
bone marrow cell | 5.10e-09 | 3 |
mesenchymal stem cell of the bone marrow | 5.10e-09 | 3 |
extraembryonic cell | 8.29e-09 | 3 |
trophoblast cell | 8.29e-09 | 3 |
motile cell | 1.24e-08 | 54 |
erythroid lineage cell | 1.91e-08 | 3 |
erythroblast | 1.91e-08 | 3 |
erythroid progenitor cell | 1.91e-08 | 3 |
proerythroblast | 1.91e-08 | 3 |
secretory cell | 2.42e-08 | 3 |
stromal cell | 2.42e-08 | 3 |
extracellular matrix secreting cell | 2.42e-08 | 3 |
connective tissue cell | 5.22e-08 | 46 |
mesenchymal cell | 5.22e-08 | 46 |
smooth muscle cell | 6.80e-08 | 3 |
vascular associated smooth muscle cell | 6.80e-08 | 3 |
aortic smooth muscle cell | 6.80e-08 | 3 |
smooth muscle myoblast | 6.80e-08 | 3 |
multi-potent skeletal muscle stem cell | 5.48e-07 | 9 |
Ontology term | p-value | n |
---|---|---|
autonomic nervous system | 8.77e-24 | 9 |
peripheral nervous system | 3.67e-23 | 11 |
sympathetic nervous system | 1.56e-09 | 3 |
neural crest-derived structure | 7.35e-09 | 3 |
neural crest | 7.35e-09 | 3 |
enteric nervous system | 7.35e-09 | 3 |
vagal neural crest | 7.35e-09 | 3 |
neural fold | 7.35e-09 | 3 |
blastocyst | 8.29e-09 | 3 |
blastula | 8.29e-09 | 3 |
cleaving embryo | 8.29e-09 | 3 |
parasympathetic nervous system | 1.34e-08 | 3 |
connective tissue | 5.22e-08 | 46 |
smooth muscle tissue | 6.80e-08 | 3 |
blood vessel smooth muscle | 6.80e-08 | 3 |
arterial system smooth muscle | 6.80e-08 | 3 |
artery smooth muscle tissue | 6.80e-08 | 3 |
aorta smooth muscle tissue | 6.80e-08 | 3 |
musculoskeletal system | 9.23e-08 | 32 |
skeletal muscle tissue | 5.48e-07 | 9 |
striated muscle tissue | 5.48e-07 | 9 |
muscle tissue | 5.48e-07 | 9 |
multilaminar epithelium | 5.48e-07 | 9 |
epithelial vesicle | 5.48e-07 | 9 |
musculature | 5.48e-07 | 9 |
somite | 5.48e-07 | 9 |
myotome | 5.48e-07 | 9 |
presomitic mesoderm | 5.48e-07 | 9 |
presumptive segmental plate | 5.48e-07 | 9 |
dermomyotome | 5.48e-07 | 9 |
trunk paraxial mesoderm | 5.48e-07 | 9 |
Ontology term | p-value | n |
---|---|---|
hematologic cancer | 1.91e-08 | 3 |
immune system cancer | 1.91e-08 | 3 |
leukemia | 1.91e-08 | 3 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.