FFCP PHASE1:Mm9::chr8:114085953..114085959,-: Difference between revisions
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{{FFCP | {{FFCP|EntrezGene=NA|HGNC=|MCL_coexpression_id=6|UniProt=NA|association_with_transcript=NA|description=CAGE_peak_at_chr8:114085953..114085959,-|id=chr8:114085953..114085959,-|ontology_enrichment_celltype=CL:0000988!1.30e-09!32;CL:0002032!1.30e-09!32;CL:0000037!1.30e-09!32;CL:0000566!1.30e-09!32;CL:0000837!1.30e-09!32;CL:0000624!3.12e-07!8|ontology_enrichment_celltype_v019_2=CL:0000815,5.27e-09,1;CL:0000792,5.27e-09,1;CL:0000355,9.86e-09,9|ontology_enrichment_disease=DOID:0060100!1.72e-08!3;DOID:4045!1.72e-08!3|ontology_enrichment_disease_v019_2=DOID:0060100,6.49e-25,3;DOID:4045,6.49e-25,3;DOID:0050686,8.35e-13,6|ontology_enrichment_uberon=UBERON:0002370!2.67e-11!23;UBERON:0000974!2.67e-11!23;UBERON:0004807!2.67e-11!23;UBERON:0005058!2.67e-11!23;UBERON:0003351!2.67e-11!23;UBERON:0009113!2.67e-11!23;UBERON:0003295!2.67e-11!23;UBERON:0009722!2.67e-11!23;UBERON:0005562!2.67e-11!23;UBERON:0007690!2.67e-11!23;UBERON:0006562!1.01e-10!24;UBERON:0003408!1.01e-10!24;UBERON:0001557!1.01e-10!24;UBERON:0001042!1.01e-10!24;UBERON:0008814!1.01e-10!24;UBERON:0009145!1.01e-10!24;UBERON:0002390!1.89e-10!45;UBERON:0003061!1.89e-10!45;UBERON:0004177!5.77e-10!29;UBERON:0002193!1.49e-09!48;UBERON:0000072!3.01e-09!27;UBERON:0000065!1.56e-08!41;UBERON:0001004!2.98e-08!42|ontology_enrichment_uberon_v019_2=UBERON:0001134,9.86e-09,9;UBERON:0002036,9.86e-09,9;UBERON:0002385,9.86e-09,9;UBERON:0000486,9.86e-09,9;UBERON:0007503,9.86e-09,9;UBERON:0001015,9.86e-09,9;UBERON:0002329,9.86e-09,9;UBERON:0003082,9.86e-09,9;UBERON:0003059,9.86e-09,9;UBERON:0007282,9.86e-09,9;UBERON:0004290,9.86e-09,9;UBERON:0009618,9.86e-09,9;UBERON:0000383,6.50e-08,10;UBERON:0007524,3.06e-07,11;UBERON:0003077,3.06e-07,11;UBERON:0007285,3.06e-07,11|phase1_expression=0,0,0,0,0,0,0,1.16210991097419,0.422366166455,0.234064526321993,0,0,2.56801094896809,0.874204024189974,0,0,0,0.315462165358238,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,5.02237956884289,7.0320181007142,2.61761871986899,202.9398633707,8.19654581950135,6.311634589405,0,0,0,0,0,0,0,0,0,0.167782606057736,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.479260498023681,1.19980546198682,0.635351135365324,0,0,0,0,0,0,0,0,0.124406970610093,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.702213187313235,2.31613116403244,1.13665399758237,0,0,0,0,0,0,0,0,0,0,0,0.0810688095458557,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.216138049874694,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.184753190166605,0,0,0,0,0,0,0.195133647857799,0,0,0,0,0.172684981865896,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.185194527369712,0,0,0,0.509935289981566,0.419854356970974,0.414599921413271,0,0,0,0.108005340821801,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.596044064343795,0,0.295379054349154,0.100966449948148,0.304827226619999,0.100826185136841,0.0974578807397524,0.481059208201647,0.584384510907845,0,0,0,0,0,0,0,0.214368379079066,0,0,0,0,0,0,0,0,0,0,0.51776031175182,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.233931608445408,0,0,0,0|short_description=p@chr8:114085953..114085959,-}} | ||
|EntrezGene=NA | |||
|HGNC= | |||
|MCL_coexpression_id=6 | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|description=CAGE_peak_at_chr8:114085953..114085959,- | |||
|id=chr8:114085953..114085959,- | |||
|ontology_enrichment_celltype=CL:0000988!1.30e-09!32;CL:0002032!1.30e-09!32;CL:0000037!1.30e-09!32;CL:0000566!1.30e-09!32;CL:0000837!1.30e-09!32;CL:0000624!3.12e-07!8 | |||
|ontology_enrichment_celltype_v019_2=CL:0000815,5.27e-09,1;CL:0000792,5.27e-09,1;CL:0000355,9.86e-09,9 | |||
|ontology_enrichment_disease=DOID:0060100!1.72e-08!3;DOID:4045!1.72e-08!3 | |||
|ontology_enrichment_disease_v019_2=DOID:0060100,6.49e-25,3;DOID:4045,6.49e-25,3;DOID:0050686,8.35e-13,6 | |||
|ontology_enrichment_uberon=UBERON:0002370!2.67e-11!23;UBERON:0000974!2.67e-11!23;UBERON:0004807!2.67e-11!23;UBERON:0005058!2.67e-11!23;UBERON:0003351!2.67e-11!23;UBERON:0009113!2.67e-11!23;UBERON:0003295!2.67e-11!23;UBERON:0009722!2.67e-11!23;UBERON:0005562!2.67e-11!23;UBERON:0007690!2.67e-11!23;UBERON:0006562!1.01e-10!24;UBERON:0003408!1.01e-10!24;UBERON:0001557!1.01e-10!24;UBERON:0001042!1.01e-10!24;UBERON:0008814!1.01e-10!24;UBERON:0009145!1.01e-10!24;UBERON:0002390!1.89e-10!45;UBERON:0003061!1.89e-10!45;UBERON:0004177!5.77e-10!29;UBERON:0002193!1.49e-09!48;UBERON:0000072!3.01e-09!27;UBERON:0000065!1.56e-08!41;UBERON:0001004!2.98e-08!42 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001134,9.86e-09,9;UBERON:0002036,9.86e-09,9;UBERON:0002385,9.86e-09,9;UBERON:0000486,9.86e-09,9;UBERON:0007503,9.86e-09,9;UBERON:0001015,9.86e-09,9;UBERON:0002329,9.86e-09,9;UBERON:0003082,9.86e-09,9;UBERON:0003059,9.86e-09,9;UBERON:0007282,9.86e-09,9;UBERON:0004290,9.86e-09,9;UBERON:0009618,9.86e-09,9;UBERON:0000383,6.50e-08,10;UBERON:0007524,3.06e-07,11;UBERON:0003077,3.06e-07,11;UBERON:0007285,3.06e-07,11 | |||
|phase1_expression=0,0,0,0,0,0,0,1.16210991097419,0.422366166455,0.234064526321993,0,0,2.56801094896809,0.874204024189974,0,0,0,0.315462165358238,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,5.02237956884289,7.0320181007142,2.61761871986899,202.9398633707,8.19654581950135,6.311634589405,0,0,0,0,0,0,0,0,0,0.167782606057736,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.479260498023681,1.19980546198682,0.635351135365324,0,0,0,0,0,0,0,0,0.124406970610093,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.702213187313235,2.31613116403244,1.13665399758237,0,0,0,0,0,0,0,0,0,0,0,0.0810688095458557,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.216138049874694,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.184753190166605,0,0,0,0,0,0,0.195133647857799,0,0,0,0,0.172684981865896,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.185194527369712,0,0,0,0.509935289981566,0.419854356970974,0.414599921413271,0,0,0,0.108005340821801,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.596044064343795,0,0.295379054349154,0.100966449948148,0.304827226619999,0.100826185136841,0.0974578807397524,0.481059208201647,0.584384510907845,0,0,0,0,0,0,0,0.214368379079066,0,0,0,0,0,0,0,0,0,0,0.51776031175182,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.233931608445408,0,0,0,0 | |||
|short_description=p@chr8:114085953..114085959,- | |||
}} |
Revision as of 14:47, 14 September 2013
Short description: | p@chr8:114085953..114085959, - |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr8:114085953..114085959, - |
Coexpression cluster: | MCL_coexpression_mm9:6 |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
regulatory T cell | 5.27e-09 | 1 |
CD4-positive, CD25-positive, alpha-beta regulatory T cell | 5.27e-09 | 1 |
multi-potent skeletal muscle stem cell | 9.86e-09 | 9 |
Ontology term | p-value | n |
---|---|---|
skeletal muscle tissue | 9.86e-09 | 9 |
striated muscle tissue | 9.86e-09 | 9 |
muscle tissue | 9.86e-09 | 9 |
multilaminar epithelium | 9.86e-09 | 9 |
epithelial vesicle | 9.86e-09 | 9 |
musculature | 9.86e-09 | 9 |
somite | 9.86e-09 | 9 |
myotome | 9.86e-09 | 9 |
presomitic mesoderm | 9.86e-09 | 9 |
presumptive segmental plate | 9.86e-09 | 9 |
dermomyotome | 9.86e-09 | 9 |
trunk paraxial mesoderm | 9.86e-09 | 9 |
musculature of body | 6.50e-08 | 10 |
dense mesenchyme tissue | 3.06e-07 | 11 |
paraxial mesoderm | 3.06e-07 | 11 |
presumptive paraxial mesoderm | 3.06e-07 | 11 |
Ontology term | p-value | n |
---|---|---|
musculoskeletal system cancer | 6.49e-25 | 3 |
muscle cancer | 6.49e-25 | 3 |
organ system cancer | 8.35e-13 | 6 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.