FFCP PHASE1:Mm9::chr8:124999936..124999988,-: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
| Line 1: | Line 1: | ||
{{FFCP | {{FFCP|EntrezGene=68718|HGNC=|UniProt=Q3U9F6,A2RS02|association_with_transcript=0bp_to_ENSMUST00000014614,NM_001033142,uc009nsx.1_5end|description=CAGE_peak_1_at_Rnf166_5end|id=chr8:124999936..124999988,-|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019_2=|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0003081!5.11e-08!88|ontology_enrichment_uberon_v019_2=UBERON:0000926,2.97e-13,120;UBERON:0004120,2.97e-13,120;UBERON:0006603,2.97e-13,120;UBERON:0003081,8.11e-08,87|phase1_expression=19.6983081938897,9.42233600626275,16.3799726180233,8.77146212789807,15.5277676283368,11.5836697619204,7.70921713965235,37.7040104449403,7.60259099619,10.2988391581677,13.5262194898149,15.9544317990673,46.7377992712192,45.1963480506217,14.9899392817048,11.7435655086099,14.6907994406911,23.9751245672261,23.5836825801871,16.5511964201232,42.9468615262902,24.0284101906142,14.6271881917804,10.7194923271582,10.0940083669555,8.03924749761028,8.18447792702242,7.32602191132023,9.69119439227507,9.07308467135751,7.98229838359097,6.35030673459631,5.53558308826113,15.8481681015439,13.2871745085586,12.3013637565284,7.9626048942324,65.2909343949576,47.6614560159518,48.1641844455894,61.1760747552255,57.3758207365094,60.203283775863,17.3737608806297,20.680893968781,15.7850206859046,71.9800036800196,20.7123898561424,29.6576346691537,27.9979054666968,14.278615005787,15.8127820801469,18.6238692724087,48.5992635147601,38.3146931022409,16.4646039063006,12.8940047972441,18.5641953219879,19.4223802425214,17.4567023159771,16.4796164911607,28.8017852258762,20.4537803105562,57.5935819060095,60.3208481165854,72.4689717245022,37.1504137042822,49.5641613864805,16.5903379693564,16.605730414798,19.5602214056785,11.1403883917483,13.9147180799517,15.3113499018693,15.6228117759725,13.7882817991503,11.0115880999389,13.5348578370299,12.595735727012,18.0684214190366,16.2848005612289,17.1901412283731,20.3803589271008,14.069065250792,17.2662019987795,11.1958862479994,14.8066548031067,16.5895506784518,9.84440513331393,7.48158445057177,16.8121403446973,10.3250865237766,17.6792546764015,10.2543606411185,8.4470934268197,12.9927797258227,22.7519960613438,16.3613109674935,15.846946280775,23.6737514921928,12.3942209403479,24.3820307087204,10.1922095882658,21.3320010945999,16.0203370348298,16.2150313904063,10.1104889002957,17.2417658375781,19.4203412735379,24.9382793628906,11.450031566565,11.2652226975492,19.3717017695089,17.3331036635516,19.0493705559842,28.274983049177,16.3148678704687,15.7613299042704,30.9613693182456,21.8385247429002,22.7466764014205,14.5462575940567,31.6865994070808,14.9318206475889,17.8029700791437,16.0937944781413,18.6911594229236,15.5974710058286,18.2981126985213,17.3757141709594,21.9600289352941,15.7067940141081,19.9897968221118,15.0872119824895,20.778804455956,13.9527486238272,20.2660334062129,18.4122316502938,16.4269792981889,13.6787206326208,13.2722851821958,14.0240283704418,13.6847218652065,15.8240058727501,15.988577300562,13.0675994690547,13.0245397138023,12.1590584247337,12.0718076042392,13.9938499324186,12.4925298156404,20.8235945806196,14.7365042089567,14.626590993931,14.404749548556,18.7092210809384,11.937624184325,14.411482798424,19.8914449576915,15.3273071676271,11.9608290590359,13.5046546095761,17.0456209621351,17.7087808572663,17.5864508691611,15.5797742982773,17.1694976895756,18.5656894363799,19.4180622897907,19.7000956894914,24.5638492923943,27.6317976233878,29.8588156795829,31.8069212462081,18.5055154736432,13.8921226712034,13.8775888853195,9.52022039988759,15.1434657880016,8.59275685883622,10.4382643670896,9.27744213267376,9.78463392917429,10.6526350623033,10.9141684155238,13.5053142873689,9.80207314321051,11.1415624343044,11.5028811400281,15.2799299471218,15.1296634912286,14.3381716743144,18.0184505905428,10.7393601853145,15.7790829942313,12.2190796707189,8.92181440971078,15.640287835541,15.9988438924371,16.2371162777562,15.2288766006134,15.6714398180687,14.5261787272703,7.17433954579204,7.27268281918851,9.66907083254871,10.3458661908136,9.64708639009667,12.731292589071,11.7955416354832,14.2678999562031,13.453509246216,14.3768206527355,15.6299198020771,12.1694692514679,12.6289438973556,12.5578189465339,12.0610880340842,24.756927482325,12.885416000393,10.5927234687317,11.8821560042632,11.4998221661366,12.5629693081362,15.7108802984769,24.7819732779405,14.6600684018758,19.2674279994434,19.4534817762134,17.0417847304368,18.131923095919,21.2634116114822,30.1582567878545,28.8270012423916,15.7364567366092,16.8321415245887,15.8945084087914,13.5965556446956,17.3771042099276,33.0736914637729,18.2994767261429,15.6175497718655,15.5104846367615,16.2498782607735,16.932699230262,16.7015153165411,18.6212922770451,17.82760733259,23.7172666767914,19.921921618152,17.7425106510336,23.1485284767432,19.3835481630756,21.4461159864296,25.2215762845929,13.352934988524,13.302236506449,11.6935149448657,18.0134154657271,15.6791925451403,14.7304127105886,12.3601468022352,16.7553767840819,19.5942789920206,28.4630243152497,25.7838858120467,24.1712120085189,15.1251318986301,15.6524007377133,14.3605813471167,16.847322196016,17.1234064897988,18.9231373692439,22.2259412853657,11.7335854031855,22.8778636532926,16.3191014560672,15.0046490176747,14.6932628293274,13.932285658404,13.7278195603607,13.459553779095,10.7847909553045,13.1651964427462,19.8210221725509,14.2406938894624,16.2971184085346,10.9253705062721,14.7629765938707,16.7008066440762,21.0773253192381,20.0130576822831,25.5669951538184,17.184071124272,12.811607740036,15.8589184358942,10.3685127188929,11.4998562807958,12.4466661335321,12.002926828249,16.2000773221658,17.0141362289619,16.2018716614741,13.6694648879124,196.728835600782,16.5963366108816,17.7040584789094,19.6395700227488,13.1743019947286,15.20605129417,18.0730147514461,19.0098401872167,19.0844006854794,99.5326577803145,100.522472183995,31.2851009421896,13.3798642091508,17.5635736751855,15.5904987573354,22.0202835671002,24.2391252833143,22.957330858314,22.8918767120595,21.1019880391629,22.328594349915,29.743724615368,29.6271957448847,25.8809854012486,38.4525008177362,19.272082607293,6.43759264784788,7.53596395519596,7.05115388729129,24.341888848056,21.5834846768859,15.201584814183,14.5770497773765,26.5833215138743,12.9892923801925,11.0478056761722,12.6037012956667,12.3734291287455,12.3314853558716,18.1294535373528,16.8755625057951,15.3109209096235,13.1411298605419,14.497288729051,13.3885678383588,14.3648954424371,13.1464876430683,14.1001895899611,17.6075056607505,20.4066294379516,10.2233494788743,9.88968274746692,13.1576875932644,13.8983466470089,12.673964994512,11.1289541417785,13.2034525532534,14.4696844435005,14.3014317699477,16.1939855036245,14.7173093949966,15.046919196169,14.4230065281157,15.1614887738429,9.94320831917705,10.4710725634009,11.4449371174714,13.6625631634389,10.4461412261017,11.6768158890514,13.9025259383307,8.15516105457313,11.1359373353607,10.1005608898393,15.0666473017701,13.7906275325789,13.9138554677694,11.9301367713194,14.8538090455479,16.7373087218424,12.1644436391612,18.4789106481537,20.8504281955039,24.0444646840272,21.0999730414584|short_description=p1@Rnf166}} | ||
|EntrezGene=68718 | |||
|HGNC= | |||
|UniProt=Q3U9F6,A2RS02 | |||
|association_with_transcript=0bp_to_ENSMUST00000014614,NM_001033142,uc009nsx.1_5end | |||
|description=CAGE_peak_1_at_Rnf166_5end | |||
|id=chr8:124999936..124999988,- | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0003081!5.11e-08!88 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000926,2.97e-13,120;UBERON:0004120,2.97e-13,120;UBERON:0006603,2.97e-13,120;UBERON:0003081,8.11e-08,87 | |||
|phase1_expression=19.6983081938897,9.42233600626275,16.3799726180233,8.77146212789807,15.5277676283368,11.5836697619204,7.70921713965235,37.7040104449403,7.60259099619,10.2988391581677,13.5262194898149,15.9544317990673,46.7377992712192,45.1963480506217,14.9899392817048,11.7435655086099,14.6907994406911,23.9751245672261,23.5836825801871,16.5511964201232,42.9468615262902,24.0284101906142,14.6271881917804,10.7194923271582,10.0940083669555,8.03924749761028,8.18447792702242,7.32602191132023,9.69119439227507,9.07308467135751,7.98229838359097,6.35030673459631,5.53558308826113,15.8481681015439,13.2871745085586,12.3013637565284,7.9626048942324,65.2909343949576,47.6614560159518,48.1641844455894,61.1760747552255,57.3758207365094,60.203283775863,17.3737608806297,20.680893968781,15.7850206859046,71.9800036800196,20.7123898561424,29.6576346691537,27.9979054666968,14.278615005787,15.8127820801469,18.6238692724087,48.5992635147601,38.3146931022409,16.4646039063006,12.8940047972441,18.5641953219879,19.4223802425214,17.4567023159771,16.4796164911607,28.8017852258762,20.4537803105562,57.5935819060095,60.3208481165854,72.4689717245022,37.1504137042822,49.5641613864805,16.5903379693564,16.605730414798,19.5602214056785,11.1403883917483,13.9147180799517,15.3113499018693,15.6228117759725,13.7882817991503,11.0115880999389,13.5348578370299,12.595735727012,18.0684214190366,16.2848005612289,17.1901412283731,20.3803589271008,14.069065250792,17.2662019987795,11.1958862479994,14.8066548031067,16.5895506784518,9.84440513331393,7.48158445057177,16.8121403446973,10.3250865237766,17.6792546764015,10.2543606411185,8.4470934268197,12.9927797258227,22.7519960613438,16.3613109674935,15.846946280775,23.6737514921928,12.3942209403479,24.3820307087204,10.1922095882658,21.3320010945999,16.0203370348298,16.2150313904063,10.1104889002957,17.2417658375781,19.4203412735379,24.9382793628906,11.450031566565,11.2652226975492,19.3717017695089,17.3331036635516,19.0493705559842,28.274983049177,16.3148678704687,15.7613299042704,30.9613693182456,21.8385247429002,22.7466764014205,14.5462575940567,31.6865994070808,14.9318206475889,17.8029700791437,16.0937944781413,18.6911594229236,15.5974710058286,18.2981126985213,17.3757141709594,21.9600289352941,15.7067940141081,19.9897968221118,15.0872119824895,20.778804455956,13.9527486238272,20.2660334062129,18.4122316502938,16.4269792981889,13.6787206326208,13.2722851821958,14.0240283704418,13.6847218652065,15.8240058727501,15.988577300562,13.0675994690547,13.0245397138023,12.1590584247337,12.0718076042392,13.9938499324186,12.4925298156404,20.8235945806196,14.7365042089567,14.626590993931,14.404749548556,18.7092210809384,11.937624184325,14.411482798424,19.8914449576915,15.3273071676271,11.9608290590359,13.5046546095761,17.0456209621351,17.7087808572663,17.5864508691611,15.5797742982773,17.1694976895756,18.5656894363799,19.4180622897907,19.7000956894914,24.5638492923943,27.6317976233878,29.8588156795829,31.8069212462081,18.5055154736432,13.8921226712034,13.8775888853195,9.52022039988759,15.1434657880016,8.59275685883622,10.4382643670896,9.27744213267376,9.78463392917429,10.6526350623033,10.9141684155238,13.5053142873689,9.80207314321051,11.1415624343044,11.5028811400281,15.2799299471218,15.1296634912286,14.3381716743144,18.0184505905428,10.7393601853145,15.7790829942313,12.2190796707189,8.92181440971078,15.640287835541,15.9988438924371,16.2371162777562,15.2288766006134,15.6714398180687,14.5261787272703,7.17433954579204,7.27268281918851,9.66907083254871,10.3458661908136,9.64708639009667,12.731292589071,11.7955416354832,14.2678999562031,13.453509246216,14.3768206527355,15.6299198020771,12.1694692514679,12.6289438973556,12.5578189465339,12.0610880340842,24.756927482325,12.885416000393,10.5927234687317,11.8821560042632,11.4998221661366,12.5629693081362,15.7108802984769,24.7819732779405,14.6600684018758,19.2674279994434,19.4534817762134,17.0417847304368,18.131923095919,21.2634116114822,30.1582567878545,28.8270012423916,15.7364567366092,16.8321415245887,15.8945084087914,13.5965556446956,17.3771042099276,33.0736914637729,18.2994767261429,15.6175497718655,15.5104846367615,16.2498782607735,16.932699230262,16.7015153165411,18.6212922770451,17.82760733259,23.7172666767914,19.921921618152,17.7425106510336,23.1485284767432,19.3835481630756,21.4461159864296,25.2215762845929,13.352934988524,13.302236506449,11.6935149448657,18.0134154657271,15.6791925451403,14.7304127105886,12.3601468022352,16.7553767840819,19.5942789920206,28.4630243152497,25.7838858120467,24.1712120085189,15.1251318986301,15.6524007377133,14.3605813471167,16.847322196016,17.1234064897988,18.9231373692439,22.2259412853657,11.7335854031855,22.8778636532926,16.3191014560672,15.0046490176747,14.6932628293274,13.932285658404,13.7278195603607,13.459553779095,10.7847909553045,13.1651964427462,19.8210221725509,14.2406938894624,16.2971184085346,10.9253705062721,14.7629765938707,16.7008066440762,21.0773253192381,20.0130576822831,25.5669951538184,17.184071124272,12.811607740036,15.8589184358942,10.3685127188929,11.4998562807958,12.4466661335321,12.002926828249,16.2000773221658,17.0141362289619,16.2018716614741,13.6694648879124,196.728835600782,16.5963366108816,17.7040584789094,19.6395700227488,13.1743019947286,15.20605129417,18.0730147514461,19.0098401872167,19.0844006854794,99.5326577803145,100.522472183995,31.2851009421896,13.3798642091508,17.5635736751855,15.5904987573354,22.0202835671002,24.2391252833143,22.957330858314,22.8918767120595,21.1019880391629,22.328594349915,29.743724615368,29.6271957448847,25.8809854012486,38.4525008177362,19.272082607293,6.43759264784788,7.53596395519596,7.05115388729129,24.341888848056,21.5834846768859,15.201584814183,14.5770497773765,26.5833215138743,12.9892923801925,11.0478056761722,12.6037012956667,12.3734291287455,12.3314853558716,18.1294535373528,16.8755625057951,15.3109209096235,13.1411298605419,14.497288729051,13.3885678383588,14.3648954424371,13.1464876430683,14.1001895899611,17.6075056607505,20.4066294379516,10.2233494788743,9.88968274746692,13.1576875932644,13.8983466470089,12.673964994512,11.1289541417785,13.2034525532534,14.4696844435005,14.3014317699477,16.1939855036245,14.7173093949966,15.046919196169,14.4230065281157,15.1614887738429,9.94320831917705,10.4710725634009,11.4449371174714,13.6625631634389,10.4461412261017,11.6768158890514,13.9025259383307,8.15516105457313,11.1359373353607,10.1005608898393,15.0666473017701,13.7906275325789,13.9138554677694,11.9301367713194,14.8538090455479,16.7373087218424,12.1644436391612,18.4789106481537,20.8504281955039,24.0444646840272,21.0999730414584 | |||
|short_description=p1@Rnf166 | |||
}} | |||
Revision as of 15:01, 14 September 2013
| Short description: | p1@Rnf166 |
|---|---|
| Species: | Mouse (Mus musculus) |
| DPI dataset: | NA |
| TSS-like-by-RIKEN-classifier(Yes/No): | NA |
| DHS support(Yes/No): | NA |
| Description: | CAGE_peak_1_at_Rnf166_5end |
| Coexpression cluster: | NA |
| Association with transcript: | 0bp_to_ENSMUST00000014614, NM_001033142, uc009nsx.1_5end |
| EntrezGene: | Rnf166 |
| Link to Zenbu: | ZENBU |
View on UCSC genome browser
Mouse over to see Genome browser image, Click image to go to Genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
| Ontology term | p-value | n |
|---|---|---|
| mesoderm | 2.97e-13 | 120 |
| mesoderm-derived structure | 2.97e-13 | 120 |
| presumptive mesoderm | 2.97e-13 | 120 |
| lateral plate mesoderm | 8.11e-08 | 87 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
