FFCP PHASE1:Mm9::chr8:86725523..86725567,-: Difference between revisions
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{{FFCP | {{FFCP|EntrezGene=NA|HGNC=|MCL_coexpression_id=169|UniProt=NA|association_with_transcript=NA|description=CAGE_peak_at_chr8:86725523..86725567,-|id=chr8:86725523..86725567,-|ontology_enrichment_celltype=CL:0000063!6.70e-16!66;CL:0000144!9.00e-12!121;CL:0000012!9.00e-12!121;CL:0002371!5.31e-10!118;CL:0000548!5.46e-10!115;CL:0000004!5.46e-10!115;CL:0000255!5.46e-10!115;CL:0000988!1.51e-08!32;CL:0002032!1.51e-08!32;CL:0000037!1.51e-08!32;CL:0000566!1.51e-08!32;CL:0000837!1.51e-08!32;CL:0002320!2.27e-08!46;CL:0000134!2.27e-08!46;CL:0000219!9.99e-08!54;CL:0000066!5.31e-07!25;CL:0000838!6.42e-07!12;CL:0000075!6.97e-07!7|ontology_enrichment_celltype_v019_2=CL:0000239,1.93e-12,6;CL:0000677,1.93e-12,6;CL:0000584,1.93e-12,6;CL:0000988,8.28e-12,32;CL:0002032,8.28e-12,32;CL:0000037,8.28e-12,32;CL:0000837,8.28e-12,32;CL:0000075,1.24e-10,7;CL:0002320,4.90e-09,46;CL:0000134,4.90e-09,46;CL:0000066,1.46e-08,25;CL:0002563,3.26e-08,9;CL:0002251,3.26e-08,9;CL:0000034,7.01e-08,97;CL:0000049,2.14e-07,19;CL:0000219,2.54e-07,54|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0002384!2.27e-08!46;UBERON:0000485!5.99e-07!11|ontology_enrichment_uberon_v019_2=UBERON:0002384,4.90e-09,46;UBERON:0003350,3.26e-08,9;UBERON:0004808,3.26e-08,9;UBERON:0001277,3.26e-08,9|phase1_expression=0.80074423552397,1.04692622291808,1.36499771816861,0.60492842261366,1.00179145989269,1.84667199103079,1.63528848416868,8.39301602370246,0.281577444303333,0.468129052643987,0,0.398860794976682,0.171200729931206,0.0874204024189974,0.333109761815663,0,0,0.315462165358238,1.09691546884591,1.27316895539409,0.255129870453209,0.695036658406197,1.04479915655574,0,0,1.72269589234506,0,1.50829862880122,0.190023419456374,0,0.665191531965914,0.635030673459631,0,0,0,0.166234645358492,0.204169356262369,0,0,1.0470474879476,14.7057872007754,1.36609096991689,0.971020706062307,0.251793635951155,0.101376931219515,0.183546752161682,0,0,0,0,0.139986421625363,0,1.00669563634642,1.45072428402269,1.34437519656986,0.514518872071894,0.286533439938757,1.03134418455488,0,0,0,0,0.889294796111139,0,0,0,0,0,0,0,0,0,0,0,0,0,1.10115880999389,0,0,0,0,0,0,0,0,0,0,0,0.681535739998656,0.453429360640713,5.2175607966302,0.860423876981386,0,0,0,0,0,0.511290967734173,0.519572009205738,0.70667914902068,0.845060518660083,1.28326477414318,0,0,0.865964164044856,0.506719730950197,0.505524445014783,0,0,0,0,0,0,0,0,0.251333182659351,0,0.144599356919912,0,0.161766849947409,0,0,0,0,0,0,3.35482348616577,4.79922184794726,1.77898317902291,0,0,0,0,0,0,0,0.101839363850316,0,0,0,0,0,0,0,0,0,0,0,0,0,0.527853372491847,0.219195732427575,0,0,0,0,0.702213187313235,1.80143534980301,1.98914449576915,0,0,0.540186184383045,0,0.196764231747404,0.154267112887378,0.232533944750408,0,0,0,0,0.162137619091711,0,0.219550115291051,0.134206418760372,0,0,0,0,0,0,0,0,0,0,0,0.164698954724011,0,0,0,0,0,0,0,0.114248512609729,0,0,0,0,0.0632365371242573,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.369506380333209,0,0,0,0.234690248288502,0.167506257441816,0,0,0,0,0.159454768657487,0.163863314715738,0,0.289298117163023,0,0,0,0,0,0,0,0,0,0,0.430846795465598,0.238968797952552,0,0.283076530788832,0.809621403349789,0,0,0,0,0,0,0.164970122972535,0,0,0,0,0,0.307435147943927,0,0,0,0,0,0,0,0,0.129358683782755,0.214337035031592,0,0,0.329098041204242,0,0,0,0,0,0,0.120625849856312,0,0,0,0,0,0,0,0,0,0,4.58941760983409,7.83728133012485,5.94259887359022,0,0,0,0,0,0,0.134864346384821,0.0826534557253359,0,0,0,0,0,0,0.194451188344048,0.129159823477731,0.168956125490778,0.352071715937262,0.13020438484395,0,0,0,0,0,0,0,0,0.198681354781265,0,0.147689527174577,0,0.0762068066549998,0,0,0,0.116876902181569,0.453460767230423,0,0,0,0,0,0.183151624267265,0.214368379079066,0,0,0,0.572895513439397,0,0,0,0,0,0,0,0,0,0,0.243106717068294,0,0.183843508450014,0,0.206035057238894,0,0,0.25347929989024,0,0.0936415074698824,0.0640251524048693,0.114870937911227,0,0,0.192909220463705,0,0,0,0.177475806159338,0.238436189947321,0,0.0941093804153306,0.0846146078916765,0,0,0.135804113845862,0,0.118635018124174,0,0,0.154936841185966,0,0.499621155875892,0,0.214871054048298,0,0.220591419119515,0|short_description=p@chr8:86725523..86725567,-}} | ||
|EntrezGene=NA | |||
|HGNC= | |||
|MCL_coexpression_id=169 | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|description=CAGE_peak_at_chr8:86725523..86725567,- | |||
|id=chr8:86725523..86725567,- | |||
|ontology_enrichment_celltype=CL:0000063!6.70e-16!66;CL:0000144!9.00e-12!121;CL:0000012!9.00e-12!121;CL:0002371!5.31e-10!118;CL:0000548!5.46e-10!115;CL:0000004!5.46e-10!115;CL:0000255!5.46e-10!115;CL:0000988!1.51e-08!32;CL:0002032!1.51e-08!32;CL:0000037!1.51e-08!32;CL:0000566!1.51e-08!32;CL:0000837!1.51e-08!32;CL:0002320!2.27e-08!46;CL:0000134!2.27e-08!46;CL:0000219!9.99e-08!54;CL:0000066!5.31e-07!25;CL:0000838!6.42e-07!12;CL:0000075!6.97e-07!7 | |||
|ontology_enrichment_celltype_v019_2=CL:0000239,1.93e-12,6;CL:0000677,1.93e-12,6;CL:0000584,1.93e-12,6;CL:0000988,8.28e-12,32;CL:0002032,8.28e-12,32;CL:0000037,8.28e-12,32;CL:0000837,8.28e-12,32;CL:0000075,1.24e-10,7;CL:0002320,4.90e-09,46;CL:0000134,4.90e-09,46;CL:0000066,1.46e-08,25;CL:0002563,3.26e-08,9;CL:0002251,3.26e-08,9;CL:0000034,7.01e-08,97;CL:0000049,2.14e-07,19;CL:0000219,2.54e-07,54 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002384!2.27e-08!46;UBERON:0000485!5.99e-07!11 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002384,4.90e-09,46;UBERON:0003350,3.26e-08,9;UBERON:0004808,3.26e-08,9;UBERON:0001277,3.26e-08,9 | |||
|phase1_expression=0.80074423552397,1.04692622291808,1.36499771816861,0.60492842261366,1.00179145989269,1.84667199103079,1.63528848416868,8.39301602370246,0.281577444303333,0.468129052643987,0,0.398860794976682,0.171200729931206,0.0874204024189974,0.333109761815663,0,0,0.315462165358238,1.09691546884591,1.27316895539409,0.255129870453209,0.695036658406197,1.04479915655574,0,0,1.72269589234506,0,1.50829862880122,0.190023419456374,0,0.665191531965914,0.635030673459631,0,0,0,0.166234645358492,0.204169356262369,0,0,1.0470474879476,14.7057872007754,1.36609096991689,0.971020706062307,0.251793635951155,0.101376931219515,0.183546752161682,0,0,0,0,0.139986421625363,0,1.00669563634642,1.45072428402269,1.34437519656986,0.514518872071894,0.286533439938757,1.03134418455488,0,0,0,0,0.889294796111139,0,0,0,0,0,0,0,0,0,0,0,0,0,1.10115880999389,0,0,0,0,0,0,0,0,0,0,0,0.681535739998656,0.453429360640713,5.2175607966302,0.860423876981386,0,0,0,0,0,0.511290967734173,0.519572009205738,0.70667914902068,0.845060518660083,1.28326477414318,0,0,0.865964164044856,0.506719730950197,0.505524445014783,0,0,0,0,0,0,0,0,0.251333182659351,0,0.144599356919912,0,0.161766849947409,0,0,0,0,0,0,3.35482348616577,4.79922184794726,1.77898317902291,0,0,0,0,0,0,0,0.101839363850316,0,0,0,0,0,0,0,0,0,0,0,0,0,0.527853372491847,0.219195732427575,0,0,0,0,0.702213187313235,1.80143534980301,1.98914449576915,0,0,0.540186184383045,0,0.196764231747404,0.154267112887378,0.232533944750408,0,0,0,0,0.162137619091711,0,0.219550115291051,0.134206418760372,0,0,0,0,0,0,0,0,0,0,0,0.164698954724011,0,0,0,0,0,0,0,0.114248512609729,0,0,0,0,0.0632365371242573,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.369506380333209,0,0,0,0.234690248288502,0.167506257441816,0,0,0,0,0.159454768657487,0.163863314715738,0,0.289298117163023,0,0,0,0,0,0,0,0,0,0,0.430846795465598,0.238968797952552,0,0.283076530788832,0.809621403349789,0,0,0,0,0,0,0.164970122972535,0,0,0,0,0,0.307435147943927,0,0,0,0,0,0,0,0,0.129358683782755,0.214337035031592,0,0,0.329098041204242,0,0,0,0,0,0,0.120625849856312,0,0,0,0,0,0,0,0,0,0,4.58941760983409,7.83728133012485,5.94259887359022,0,0,0,0,0,0,0.134864346384821,0.0826534557253359,0,0,0,0,0,0,0.194451188344048,0.129159823477731,0.168956125490778,0.352071715937262,0.13020438484395,0,0,0,0,0,0,0,0,0.198681354781265,0,0.147689527174577,0,0.0762068066549998,0,0,0,0.116876902181569,0.453460767230423,0,0,0,0,0,0.183151624267265,0.214368379079066,0,0,0,0.572895513439397,0,0,0,0,0,0,0,0,0,0,0.243106717068294,0,0.183843508450014,0,0.206035057238894,0,0,0.25347929989024,0,0.0936415074698824,0.0640251524048693,0.114870937911227,0,0,0.192909220463705,0,0,0,0.177475806159338,0.238436189947321,0,0.0941093804153306,0.0846146078916765,0,0,0.135804113845862,0,0.118635018124174,0,0,0.154936841185966,0,0.499621155875892,0,0.214871054048298,0,0.220591419119515,0 | |||
|short_description=p@chr8:86725523..86725567,- | |||
}} |
Revision as of 16:15, 14 September 2013
Short description: | p@chr8:86725523..86725567, - |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr8:86725523..86725567, - |
Coexpression cluster: | MCL_coexpression_mm9:169 |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
brush border epithelial cell | 1.93e-12 | 6 |
gut absorptive cell | 1.93e-12 | 6 |
enterocyte | 1.93e-12 | 6 |
hematopoietic cell | 8.28e-12 | 32 |
hematopoietic oligopotent progenitor cell | 8.28e-12 | 32 |
hematopoietic stem cell | 8.28e-12 | 32 |
hematopoietic multipotent progenitor cell | 8.28e-12 | 32 |
columnar/cuboidal epithelial cell | 1.24e-10 | 7 |
connective tissue cell | 4.90e-09 | 46 |
mesenchymal cell | 4.90e-09 | 46 |
epithelial cell | 1.46e-08 | 25 |
intestinal epithelial cell | 3.26e-08 | 9 |
epithelial cell of alimentary canal | 3.26e-08 | 9 |
stem cell | 7.01e-08 | 97 |
common myeloid progenitor | 2.14e-07 | 19 |
motile cell | 2.54e-07 | 54 |
Ontology term | p-value | n |
---|---|---|
connective tissue | 4.90e-09 | 46 |
epithelium of mucosa | 3.26e-08 | 9 |
gastrointestinal system epithelium | 3.26e-08 | 9 |
intestinal epithelium | 3.26e-08 | 9 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.