FFCP PHASE1:Mm9::chr9:108919417..108919443,+: Difference between revisions
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{{FFCP | {{FFCP|EntrezGene=270198|HGNC=|MCL_coexpression_id=6|UniProt=|association_with_transcript=0bp_to_ENSMUST00000129526_5end|description=CAGE_peak_4_at_Pfkfb4_5end|id=chr9:108919417..108919443,+|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019_2=CL:0002194,4.73e-10,4;CL:0000766,4.73e-10,4;CL:0000234,4.73e-10,4;CL:0000576,4.73e-10,4;CL:0000235,4.73e-10,4;CL:0000864,4.73e-10,4;CL:0002009,4.73e-10,4;CL:0000040,4.73e-10,4;CL:0000559,4.73e-10,4;CL:0002092,2.52e-08,3;CL:0002540,2.52e-08,3|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=DOID:0060100,4.55e-08,3;DOID:4045,4.55e-08,3|ontology_enrichment_uberon=|ontology_enrichment_uberon_v019_2=UBERON:0002204,3.46e-13,32;UBERON:0001474,8.81e-11,22;UBERON:0004765,8.81e-11,22;UBERON:0001434,8.81e-11,22;UBERON:0002371,1.60e-10,16;UBERON:0002048,3.63e-09,14;UBERON:0000117,3.63e-09,14;UBERON:0000171,3.63e-09,14;UBERON:0000170,3.63e-09,14;UBERON:0005597,3.63e-09,14;UBERON:0000118,3.63e-09,14;UBERON:0005153,4.66e-09,17;UBERON:0005157,1.88e-07,20;UBERON:0005178,2.64e-07,17;UBERON:0005181,2.64e-07,17;UBERON:0002224,2.64e-07,17;UBERON:0000915,2.64e-07,17;UBERON:0008947,2.64e-07,17;UBERON:0003258,2.64e-07,17|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.666219523631325,0.607425802169478,0,1.26184866143295,1.50825876966313,0.42438965179803,0.510259740906419,0.397163804803541,0.261199789138935,0,0,0,0,0,0,0,0,0,0,0,0,0,0,10.8818223991596,4.6880120671428,3.66466620781659,38.2350467220159,23.9065919735456,21.8479658864019,0,0,0,0,0,0,0,0,0,0,0,0,0,0.286533439938757,0,0.202316460859598,0,0,0,0,8.09909745553259,5.93319817540185,8.5257613793532,3.59520132622086,2.30530983192933,0,0,0,0,0.220868540951614,0,0,0,0,0.127687338085188,0,0,0,0,0.558365998002762,0,0.15279824777681,0,0.142371680799103,0,0,0,0,0,0,0,0,0,0,0,0,0,0.14084341977668,0,0,0,0,0,0,0.68510327831436,2.07150306917737,1.7813056687779,0.173485326766136,0,0.461230994512117,0.150722640552623,0.352766121407114,0.251333182659351,0.247194967734374,0.86759614151947,5.30766331169925,0,1.32504911076236,0.484875253135222,0,0,0.209446706813455,0.766371165625774,0,0,0,0.299581278809645,0.457500602818626,0,0.347648640384553,0.255715457330331,0.62336413367868,0.162241263067758,0.203678727700633,1.99051152976149,0.252722758433675,0.420883711772948,0,0,0,0.150704817835715,0.0680364991513279,0,0,0,0,0,0,0,0,0,0.411564272815887,0,0,0,0,0,0,0,0.23674473558521,0,0,0,0.268273401399619,0.116765342367169,0.493679549740441,0.492502392237286,0.810688095458557,0.438599962275997,1.3173006917463,1.20785776884335,0.210289948564127,0,0.330418782983798,0.264450566663544,0,0,0,0,0,0.190225626112559,1.42358718463353,0.329397909448022,0.251335208800269,0.596869416123452,0.58489226135736,0,1.29682829924817,0.597423819763102,0,0,0,0,0,0.0701358198903186,0.189709611372772,0.590440591918409,0.627994911365499,0.493588655687202,0,0,0,0,0.202860121388503,0,0.25462585178142,0.287696137450811,0.486405680325106,1.09824565275233,0,0.372140947668503,0.312037673114561,0,0,0,5.54259570499814,0,0.162964976442026,0,0,0.502518772325447,0.714130922658041,1.75620283072019,1.89162172927429,1.99318220683897,1.2756381492599,2.78567635016755,4.66249451037918,4.19482269886384,12.0633027151418,5.4390568381871,0.491764273019036,1.10374698521893,0.481651769963376,0.468846746368813,0,1.26235463602186,0,0,0,0,0,0,0,0,0,0.321321316421807,0.425820255624806,0.178065603667255,0.325773918707152,1.15479086080775,0,0,0,0.188605079755898,0.295301892880773,0,0,0,0.356497378384721,0.316036757935816,0,0,0.680879211507576,0,0,0,0,0,0.164549020602121,0,0,0,0.661585194164886,0.32977250588296,0.161464426695906,0.0603129249281559,0.238744688006273,0.164140899745061,0.874442509889552,0.556275906031529,0.854354403989263,2.06386867963222,2.96311243791539,0.376736914009382,0.956859594047176,0,0,0,0,0,0,0.406638934253697,0.324016022465404,0.418176592028937,0,0.269728692769641,0.578574190077352,0.523511883968059,0.129614973291793,2.4853572523477,0,0,0,0,0,0.168956125490778,0.117357238645754,0,0,0,0,0.316011120628178,0,0.102710957164827,0,0,0.198681354781265,0,0,0,0,0,0,0,0,0.226730383615211,0,0,0,0.579568782096571,0.563047426353546,1.46521299413812,0.857473516316263,0,1.12950368523413,0,0,0.171853182343688,0,0,0.675022500231806,0,0,0,0,0,0,0.243106717068294,0,0.367687016900028,0.222246727801615,0.206035057238894,0,0,0,0.377252682772152,0.187283014939765,0.128050304809739,0.17230640686684,0,0.115884325944855,0.192909220463705,0.412085900803307,0.147198920134397,0,0.177475806159338,0.238436189947321,0.290692833264657,0.376437521661322,0.169229215783353,0,0,0.271608227691724,0,0,0,0,0.154936841185966,0,0.249810577937946,0,0.429742108096597,0.765153328275374,0.220591419119515,0.927471342481686|short_description=p4@Pfkfb4}} | ||
|EntrezGene=270198 | |||
|HGNC= | |||
|MCL_coexpression_id=6 | |||
|UniProt= | |||
|association_with_transcript=0bp_to_ENSMUST00000129526_5end | |||
|description=CAGE_peak_4_at_Pfkfb4_5end | |||
|id=chr9:108919417..108919443,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019_2=CL:0002194,4.73e-10,4;CL:0000766,4.73e-10,4;CL:0000234,4.73e-10,4;CL:0000576,4.73e-10,4;CL:0000235,4.73e-10,4;CL:0000864,4.73e-10,4;CL:0002009,4.73e-10,4;CL:0000040,4.73e-10,4;CL:0000559,4.73e-10,4;CL:0002092,2.52e-08,3;CL:0002540,2.52e-08,3 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2=DOID:0060100,4.55e-08,3;DOID:4045,4.55e-08,3 | |||
|ontology_enrichment_uberon= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002204,3.46e-13,32;UBERON:0001474,8.81e-11,22;UBERON:0004765,8.81e-11,22;UBERON:0001434,8.81e-11,22;UBERON:0002371,1.60e-10,16;UBERON:0002048,3.63e-09,14;UBERON:0000117,3.63e-09,14;UBERON:0000171,3.63e-09,14;UBERON:0000170,3.63e-09,14;UBERON:0005597,3.63e-09,14;UBERON:0000118,3.63e-09,14;UBERON:0005153,4.66e-09,17;UBERON:0005157,1.88e-07,20;UBERON:0005178,2.64e-07,17;UBERON:0005181,2.64e-07,17;UBERON:0002224,2.64e-07,17;UBERON:0000915,2.64e-07,17;UBERON:0008947,2.64e-07,17;UBERON:0003258,2.64e-07,17 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.666219523631325,0.607425802169478,0,1.26184866143295,1.50825876966313,0.42438965179803,0.510259740906419,0.397163804803541,0.261199789138935,0,0,0,0,0,0,0,0,0,0,0,0,0,0,10.8818223991596,4.6880120671428,3.66466620781659,38.2350467220159,23.9065919735456,21.8479658864019,0,0,0,0,0,0,0,0,0,0,0,0,0,0.286533439938757,0,0.202316460859598,0,0,0,0,8.09909745553259,5.93319817540185,8.5257613793532,3.59520132622086,2.30530983192933,0,0,0,0,0.220868540951614,0,0,0,0,0.127687338085188,0,0,0,0,0.558365998002762,0,0.15279824777681,0,0.142371680799103,0,0,0,0,0,0,0,0,0,0,0,0,0,0.14084341977668,0,0,0,0,0,0,0.68510327831436,2.07150306917737,1.7813056687779,0.173485326766136,0,0.461230994512117,0.150722640552623,0.352766121407114,0.251333182659351,0.247194967734374,0.86759614151947,5.30766331169925,0,1.32504911076236,0.484875253135222,0,0,0.209446706813455,0.766371165625774,0,0,0,0.299581278809645,0.457500602818626,0,0.347648640384553,0.255715457330331,0.62336413367868,0.162241263067758,0.203678727700633,1.99051152976149,0.252722758433675,0.420883711772948,0,0,0,0.150704817835715,0.0680364991513279,0,0,0,0,0,0,0,0,0,0.411564272815887,0,0,0,0,0,0,0,0.23674473558521,0,0,0,0.268273401399619,0.116765342367169,0.493679549740441,0.492502392237286,0.810688095458557,0.438599962275997,1.3173006917463,1.20785776884335,0.210289948564127,0,0.330418782983798,0.264450566663544,0,0,0,0,0,0.190225626112559,1.42358718463353,0.329397909448022,0.251335208800269,0.596869416123452,0.58489226135736,0,1.29682829924817,0.597423819763102,0,0,0,0,0,0.0701358198903186,0.189709611372772,0.590440591918409,0.627994911365499,0.493588655687202,0,0,0,0,0.202860121388503,0,0.25462585178142,0.287696137450811,0.486405680325106,1.09824565275233,0,0.372140947668503,0.312037673114561,0,0,0,5.54259570499814,0,0.162964976442026,0,0,0.502518772325447,0.714130922658041,1.75620283072019,1.89162172927429,1.99318220683897,1.2756381492599,2.78567635016755,4.66249451037918,4.19482269886384,12.0633027151418,5.4390568381871,0.491764273019036,1.10374698521893,0.481651769963376,0.468846746368813,0,1.26235463602186,0,0,0,0,0,0,0,0,0,0.321321316421807,0.425820255624806,0.178065603667255,0.325773918707152,1.15479086080775,0,0,0,0.188605079755898,0.295301892880773,0,0,0,0.356497378384721,0.316036757935816,0,0,0.680879211507576,0,0,0,0,0,0.164549020602121,0,0,0,0.661585194164886,0.32977250588296,0.161464426695906,0.0603129249281559,0.238744688006273,0.164140899745061,0.874442509889552,0.556275906031529,0.854354403989263,2.06386867963222,2.96311243791539,0.376736914009382,0.956859594047176,0,0,0,0,0,0,0.406638934253697,0.324016022465404,0.418176592028937,0,0.269728692769641,0.578574190077352,0.523511883968059,0.129614973291793,2.4853572523477,0,0,0,0,0,0.168956125490778,0.117357238645754,0,0,0,0,0.316011120628178,0,0.102710957164827,0,0,0.198681354781265,0,0,0,0,0,0,0,0,0.226730383615211,0,0,0,0.579568782096571,0.563047426353546,1.46521299413812,0.857473516316263,0,1.12950368523413,0,0,0.171853182343688,0,0,0.675022500231806,0,0,0,0,0,0,0.243106717068294,0,0.367687016900028,0.222246727801615,0.206035057238894,0,0,0,0.377252682772152,0.187283014939765,0.128050304809739,0.17230640686684,0,0.115884325944855,0.192909220463705,0.412085900803307,0.147198920134397,0,0.177475806159338,0.238436189947321,0.290692833264657,0.376437521661322,0.169229215783353,0,0,0.271608227691724,0,0,0,0,0.154936841185966,0,0.249810577937946,0,0.429742108096597,0.765153328275374,0.220591419119515,0.927471342481686 | |||
|short_description=p4@Pfkfb4 | |||
}} |
Revision as of 16:52, 14 September 2013
Short description: | p4@Pfkfb4 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_4_at_Pfkfb4_5end |
Coexpression cluster: | MCL_coexpression_mm9:6 |
Association with transcript: | 0bp_to_ENSMUST00000129526_5end |
EntrezGene: | Pfkfb4 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
monopoietic cell | 4.73e-10 | 4 |
myeloid leukocyte | 4.73e-10 | 4 |
phagocyte | 4.73e-10 | 4 |
monocyte | 4.73e-10 | 4 |
macrophage | 4.73e-10 | 4 |
tissue-resident macrophage | 4.73e-10 | 4 |
macrophage dendritic cell progenitor | 4.73e-10 | 4 |
monoblast | 4.73e-10 | 4 |
promonocyte | 4.73e-10 | 4 |
bone marrow cell | 2.52e-08 | 3 |
mesenchymal stem cell of the bone marrow | 2.52e-08 | 3 |
Ontology term | p-value | n |
---|---|---|
musculoskeletal system | 3.46e-13 | 32 |
bone element | 8.81e-11 | 22 |
skeletal element | 8.81e-11 | 22 |
skeletal system | 8.81e-11 | 22 |
bone marrow | 1.60e-10 | 16 |
lung | 3.63e-09 | 14 |
respiratory tube | 3.63e-09 | 14 |
respiration organ | 3.63e-09 | 14 |
pair of lungs | 3.63e-09 | 14 |
lung primordium | 3.63e-09 | 14 |
lung bud | 3.63e-09 | 14 |
epithelial bud | 4.66e-09 | 17 |
epithelial fold | 1.88e-07 | 20 |
thoracic cavity element | 2.64e-07 | 17 |
thoracic segment organ | 2.64e-07 | 17 |
thoracic cavity | 2.64e-07 | 17 |
thoracic segment of trunk | 2.64e-07 | 17 |
respiratory primordium | 2.64e-07 | 17 |
endoderm of foregut | 2.64e-07 | 17 |
Ontology term | p-value | n |
---|---|---|
musculoskeletal system cancer | 4.55e-08 | 3 |
muscle cancer | 4.55e-08 | 3 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.