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FFCP PHASE1:Mm9::chr9:108962225..108962285,-: Difference between revisions

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{{FFCP
{{FFCP|EntrezGene=22040|HGNC=|UniProt=Q91XB0|association_with_transcript=0bp_to_ENSMUST00000061973,NM_011637,uc009rrr.1_5end|description=CAGE_peak_2_at_Trex1_5end|id=chr9:108962225..108962285,-|ontology_enrichment_celltype=CL:0000117!4.91e-07!23;CL:0000337!4.91e-07!23|ontology_enrichment_celltype_v019_2=CL:0000117,4.83e-07,23;CL:0000337,4.83e-07,23|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0004111!1.97e-09!122;UBERON:0000025!6.22e-08!114;UBERON:0000477!1.42e-07!154;UBERON:0001049!4.25e-07!52;UBERON:0005068!4.25e-07!52;UBERON:0006241!4.25e-07!52;UBERON:0007135!4.25e-07!52;UBERON:0000483!5.54e-07!181|ontology_enrichment_uberon_v019_2=UBERON:0004111,1.73e-09,122;UBERON:0010314,2.42e-08,92;UBERON:0000025,5.51e-08,114;UBERON:0001049,4.19e-07,52;UBERON:0005068,4.19e-07,52;UBERON:0006241,4.19e-07,52;UBERON:0007135,4.19e-07,52|phase1_expression=3.52327463630547,2.09385244583617,0,3.0246421130683,2.00358291978539,1.84667199103079,2.10251376535973,0.516493293766305,0.140788722151667,0,1.02730780935303,0.159544317990673,0.342401459862411,0.34968160967599,2.6648780945253,1.21485160433896,2.79824751251259,0.946386496074713,0.411343300817216,1.69755860719212,2.63634199468316,2.6808556824239,3.6567970479451,2.71987118748791,1.37645568640302,1.72269589234506,4.30761996159075,2.37018355954478,2.66032787238923,6.30075324399827,1.99557459589774,6.35030673459631,3.69038872550742,0,8.37669697278696,4.98703936075477,6.73758875665818,2.09265815368454,0.7813353445238,2.61761871986899,1.17646297606203,3.41522742479223,1.45653105909346,2.14024590558481,1.21652317463417,0.183546752161682,3.9119567217402,3.70642765846759,4.83309602015838,1.94429899074283,3.07970127575798,1.43752564364972,0.671130424230945,0,0.336093799142464,2.05807548828758,2.29226751951005,4.12537673821954,8.09265843438391,9.52183762689659,2.53532561402472,0,0,3.5995988691256,4.94433181283487,2.1314403448383,2.39680088414724,2.68952813725088,5.80661828927475,7.96535036156975,6.30974884054146,3.71346279724945,2.65042249141936,6.73699395682247,7.76348315247715,7.35375029288017,1.10115880999389,3.06449611404451,2.61131106535614,5.40733779693795,5.03182039813253,3.12548022334056,5.02529398202486,7.31591393041184,4.27835093775068,2.65165726926301,3.55929201997757,7.08317894136142,0.984440513331393,0.604572480854284,3.76823835312181,5.16254326188832,0,5.39703191637817,3.24888208723835,2.24013443548668,4.0728881838208,1.70430322578058,1.29893002301434,1.7666978725517,3.23939865486365,1.28326477414318,0,0,1.94841936910093,1.52015919285059,2.52762222507392,3.88225191044804,0.517875767294343,2.52351636410202,3.64319186208885,1.82679286987285,3.92046345335299,3.3158980921577,3.76283862834255,4.39833069653864,1.23597483867187,3.61498392299779,0.884610551949874,3.23533699894818,3.3126227769059,2.90925151881133,1.86391761218122,2.92780797011547,6.0739544975902,4.34276993854605,2.75574786363617,2.99951365496704,3.30382590389968,3.44518470631092,4.57500602818627,4.39790232395025,1.91206752211504,2.30143911597297,1.87009240103604,2.59586020908412,4.68461073711455,2.98576729464223,4.54900965180614,4.8401626853889,1.95180664444056,1.37941262660084,1.80062129805349,2.26057226753573,4.01415344992834,3.58718416797579,3.65436725782942,2.06962696591213,0.431135985865684,1.89106080167819,1.40760899331159,2.41115305670332,1.94633074457919,1.39300866608867,1.02891068203972,3.18454826909589,0.702213187313235,3.08817488537658,3.40996199274711,0.621377317606506,2.11073453982987,2.52086886045421,2.60419209143731,1.37734962223183,4.01094493507183,2.09280550275367,4.02410102099429,5.25444040652263,4.77223564749093,6.23836363500562,7.1340552400353,6.57899943413995,6.58650345873152,6.84452735677896,3.78521907415429,7.10041825417063,2.31293148088659,1.58670339998127,0.853153002140936,2.32236671860439,1.67527699718721,2.21851877085677,1.55664630691409,1.14135375667535,4.2707615539006,3.78807595865225,2.5133520880027,5.17286827306992,3.11942539390592,1.79763881730844,3.24207074812041,4.77939055810481,3.60369011810855,3.42745537829186,1.1270773567308,3.66572390121566,3.49114476901726,3.15611189506434,3.73095569033118,3.69025369949005,4.55296310739987,5.18268088471562,4.15033677922008,1.83529616287703,1.96558995113203,2.9232074610031,2.63718157805054,2.17059443777175,2.03700681425136,3.74004978686054,1.45921704097532,3.0201755450689,0,4.83783231969054,3.74445207737473,3.78868316920668,2.33216637578486,7.71909634181387,3.69506380333209,2.08440552947533,2.11854469374634,2.54617628662782,2.34690248288502,2.01007508930179,3.57065461329021,2.53673742215138,2.83743259391144,3.10050565508285,3.02964060449226,2.94953966488328,2.76295970985433,2.74833211304872,3.01582567878545,1.08781136763742,0.491764273019036,4.41498794087572,3.37156238974363,3.16471553798949,0.491804836130026,6.81671503451807,1.89304931649754,1.95219372148319,1.93881057959519,2.38968797952552,1.33679204449436,1.98153571552183,2.02405350837447,1.75353514746787,1.58115111178609,2.2492492149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|EntrezGene=22040
|HGNC=
|UniProt=Q91XB0
|association_with_transcript=0bp_to_ENSMUST00000061973,NM_011637,uc009rrr.1_5end
|description=CAGE_peak_2_at_Trex1_5end
|id=chr9:108962225..108962285,-
|ontology_enrichment_celltype=CL:0000117!4.91e-07!23;CL:0000337!4.91e-07!23
|ontology_enrichment_celltype_v019_2=CL:0000117,4.83e-07,23;CL:0000337,4.83e-07,23
|ontology_enrichment_disease=
|ontology_enrichment_disease_v019_2=
|ontology_enrichment_uberon=UBERON:0004111!1.97e-09!122;UBERON:0000025!6.22e-08!114;UBERON:0000477!1.42e-07!154;UBERON:0001049!4.25e-07!52;UBERON:0005068!4.25e-07!52;UBERON:0006241!4.25e-07!52;UBERON:0007135!4.25e-07!52;UBERON:0000483!5.54e-07!181
|ontology_enrichment_uberon_v019_2=UBERON:0004111,1.73e-09,122;UBERON:0010314,2.42e-08,92;UBERON:0000025,5.51e-08,114;UBERON:0001049,4.19e-07,52;UBERON:0005068,4.19e-07,52;UBERON:0006241,4.19e-07,52;UBERON:0007135,4.19e-07,52
|phase1_expression=3.52327463630547,2.09385244583617,0,3.0246421130683,2.00358291978539,1.84667199103079,2.10251376535973,0.516493293766305,0.140788722151667,0,1.02730780935303,0.159544317990673,0.342401459862411,0.34968160967599,2.6648780945253,1.21485160433896,2.79824751251259,0.946386496074713,0.411343300817216,1.69755860719212,2.63634199468316,2.6808556824239,3.6567970479451,2.71987118748791,1.37645568640302,1.72269589234506,4.30761996159075,2.37018355954478,2.66032787238923,6.30075324399827,1.99557459589774,6.35030673459631,3.69038872550742,0,8.37669697278696,4.98703936075477,6.73758875665818,2.09265815368454,0.7813353445238,2.61761871986899,1.17646297606203,3.41522742479223,1.45653105909346,2.14024590558481,1.21652317463417,0.183546752161682,3.9119567217402,3.70642765846759,4.83309602015838,1.94429899074283,3.07970127575798,1.43752564364972,0.671130424230945,0,0.336093799142464,2.05807548828758,2.29226751951005,4.12537673821954,8.09265843438391,9.52183762689659,2.53532561402472,0,0,3.5995988691256,4.94433181283487,2.1314403448383,2.39680088414724,2.68952813725088,5.80661828927475,7.96535036156975,6.30974884054146,3.71346279724945,2.65042249141936,6.73699395682247,7.76348315247715,7.35375029288017,1.10115880999389,3.06449611404451,2.61131106535614,5.40733779693795,5.03182039813253,3.12548022334056,5.02529398202486,7.31591393041184,4.27835093775068,2.65165726926301,3.55929201997757,7.08317894136142,0.984440513331393,0.604572480854284,3.76823835312181,5.16254326188832,0,5.39703191637817,3.24888208723835,2.24013443548668,4.0728881838208,1.70430322578058,1.29893002301434,1.7666978725517,3.23939865486365,1.28326477414318,0,0,1.94841936910093,1.52015919285059,2.52762222507392,3.88225191044804,0.517875767294343,2.52351636410202,3.64319186208885,1.82679286987285,3.92046345335299,3.3158980921577,3.76283862834255,4.39833069653864,1.23597483867187,3.61498392299779,0.884610551949874,3.23533699894818,3.3126227769059,2.90925151881133,1.86391761218122,2.92780797011547,6.0739544975902,4.34276993854605,2.75574786363617,2.99951365496704,3.30382590389968,3.44518470631092,4.57500602818627,4.39790232395025,1.91206752211504,2.30143911597297,1.87009240103604,2.59586020908412,4.68461073711455,2.98576729464223,4.54900965180614,4.8401626853889,1.95180664444056,1.37941262660084,1.80062129805349,2.26057226753573,4.01415344992834,3.58718416797579,3.65436725782942,2.06962696591213,0.431135985865684,1.89106080167819,1.40760899331159,2.41115305670332,1.94633074457919,1.39300866608867,1.02891068203972,3.18454826909589,0.702213187313235,3.08817488537658,3.40996199274711,0.621377317606506,2.11073453982987,2.52086886045421,2.60419209143731,1.37734962223183,4.01094493507183,2.09280550275367,4.02410102099429,5.25444040652263,4.77223564749093,6.23836363500562,7.1340552400353,6.57899943413995,6.58650345873152,6.84452735677896,3.78521907415429,7.10041825417063,2.31293148088659,1.58670339998127,0.853153002140936,2.32236671860439,1.67527699718721,2.21851877085677,1.55664630691409,1.14135375667535,4.2707615539006,3.78807595865225,2.5133520880027,5.17286827306992,3.11942539390592,1.79763881730844,3.24207074812041,4.77939055810481,3.60369011810855,3.42745537829186,1.1270773567308,3.66572390121566,3.49114476901726,3.15611189506434,3.73095569033118,3.69025369949005,4.55296310739987,5.18268088471562,4.15033677922008,1.83529616287703,1.96558995113203,2.9232074610031,2.63718157805054,2.17059443777175,2.03700681425136,3.74004978686054,1.45921704097532,3.0201755450689,0,4.83783231969054,3.74445207737473,3.78868316920668,2.33216637578486,7.71909634181387,3.69506380333209,2.08440552947533,2.11854469374634,2.54617628662782,2.34690248288502,2.01007508930179,3.57065461329021,2.53673742215138,2.83743259391144,3.10050565508285,3.02964060449226,2.94953966488328,2.76295970985433,2.74833211304872,3.01582567878545,1.08781136763742,0.491764273019036,4.41498794087572,3.37156238974363,3.16471553798949,0.491804836130026,6.81671503451807,1.89304931649754,1.95219372148319,1.93881057959519,2.38968797952552,1.33679204449436,1.98153571552183,2.02405350837447,1.75353514746787,1.58115111178609,2.24924921495265,2.41298144854057,5.34196811001766,5.04949573996086,2.8044920905331,1.32745138339963,1.21390318077491,2.72091201268276,0.754420319023592,0.885905678642318,3.07435147943927,1.55056975900933,2.18120237686503,3.20847640546249,0,0,1.03135543248187,3.74483566329167,1.62054984628179,2.8458910432206,4.07240366560025,3.90148514013002,4.45922044005176,4.44282355625727,5.78483403317739,1.87737366450968,2.75381692122966,3.52845436887939,2.4732937941222,3.22928853391811,2.11095237248546,1.90995750405018,2.1338316966858,4.08073171281791,4.26478194624172,3.07567585436135,2.06386867963222,2.77791791054568,1.50694765603753,2.46049609897845,1.14389086603261,2.37969801991397,2.37917468950219,1.24379976423981,3.81868247206045,0.158167996790568,2.23651413839534,3.13215488383224,3.13632444021703,1.52853794622324,3.50647300600534,3.47144514046411,2.6175594198403,4.27729411862916,6.83473244395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|short_description=p2@Trex1
}}

Revision as of 16:52, 14 September 2013

Short description:p2@Trex1
Species:Mouse (Mus musculus)
DPI dataset: NA
TSS-like-by-RIKEN-classifier(Yes/No): NA
DHS support(Yes/No): NA
Description: CAGE_peak_2_at_Trex1_5end
Coexpression cluster:NA
Association with transcript: 0bp_to_ENSMUST00000061973, NM_011637, uc009rrr.1_5end
EntrezGene:Trex1
Link to Zenbu:ZENBU


View on UCSC genome browser

Mouse over to see Genome browser image, Click image to go to Genome browser


CAGE Expression

Sample

p2@Trex1

Atoh1+ Inner ear hair cells - organ of corti, pool1.CNhs12533.12158-128G73.52
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13242.11850-124I52.09
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13233.11851-124I60.00
CD326+ enterocyte, pool1.CNhs13542.11848-124I33.02
CD326+ enterocyte, pool2.CNhs13197.11849-124I42.00
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13236.11852-124I71.85
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13210.11853-124I82.10
CD4+CD25+ regulatory T cells, pool2 (Balb_cAJcl).CNhs13221.11818-124E90.52
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool1 (C57BL_6J).CNhs13219.11816-124E70.14
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool2 (Balb_cAJcl).CNhs13226.11820-124F20.00
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool1 (C57BL_6J).CNhs13218.11815-124E61.03
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool2 (Balb_cAJcl).CNhs13225.11819-124F10.16
CD4+CD25-CD44- naive conventional T cells, pool1 (C57BL_6J).CNhs13217.11813-124E40.34
CD4+CD25-CD44- naive conventional T cells, pool2 (Balb_cAJcl).CNhs13220.11817-124E80.35
CD41+ megakaryocyte cancer, donor1.CNhs13079.11774-124A12.66
CD41+ megakaryocyte cancer, donor2.CNhs13213.11776-124A31.21
CD41+ megakaryocyte cancer, donor3.CNhs13506.11778-124A52.80
CD41+ megakaryocyte control, donor1.CNhs13212.11775-124A20.95
CD41+ megakaryocyte control, donor2.CNhs13214.11777-124A40.41
CD41+ megakaryocyte control, donor3.CNhs13201.11779-124A61.70
Clontech Mouse Universal Reference Total RNA, pool1.CNhs10609.10001-101A32.64
EBF KO HPCs induced to T cell, 00hr00min, biol_rep1.CNhs11058.12972-138H22.68
EBF KO HPCs induced to T cell, 00hr00min, biol_rep2.CNhs12980.12988-138I93.66
Follicle Associated Epithelium, pool2.CNhs13211.10262-104D12.72
Follicle Associated Epithelium, pool3.CNhs13200.10263-104D21.38
GP2+ M cell, pool1.CNhs13228.11845-124H91.72
GP2+ M cell, pool2.CNhs13231.11846-124I14.31
GP2+ M cell, pool3.CNhs13240.11847-124I22.37
Ileum epithelium, pool1.CNhs13199.10252-104B92.66
Ileum epithelium, pool2.CNhs13232.10253-104C16.30
Ileum epithelium, treated with RANKL, day03, pool3.CNhs13234.10260-104C82.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep1.CNhs12449.13063-139I36.35
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep2.CNhs12668.13129-140G63.69
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep3.CNhs12770.13195-141E90.00
Lgr5 positive intestinal stem cells, pool1.CNhs12555.12228-129F58.38
Lgr5 positive intestinal stem cells, pool2.CNhs12556.12229-129F64.99
Lgr5 positive intestinal stem cells, pool3.CNhs12557.12230-129F76.74
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor1 (10,11,12 3LL).CNhs12539.12159-128G82.09
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor2 (0127 3LL).CNhs12198.12161-128H10.78
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor3 (0128 3LL).CNhs12542.12163-128H32.62
MC1+Gr1+ myeloid-derived suppressor cells control, donor1 (4,5,6PBS).CNhs12540.12160-128G91.18
MC1+Gr1+ myeloid-derived suppressor cells control, donor2 (0127 PBS).CNhs12541.12162-128H23.42
MC1+Gr1+ myeloid-derived suppressor cells control, donor3 (0128 PBS).CNhs12543.12164-128H41.46
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep1.CNhs11055.11484-119D82.14
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep2.CNhs11056.11485-119D91.22
Mouse Aortic Smooth Muscle cells, donor1.CNhs11297.11299-117B30.18
Mouse Astrocytes - cerebellar, donor1.CNhs13077.11708-123B73.91
Mouse Astrocytes - cerebellar, donor2.CNhs12076.11550-120C23.71
Mouse Astrocytes - hippocampus, donor1.CNhs12129.11709-123B84.83
Mouse Astrocytes - hippocampus, donor2.CNhs12077.11551-120C31.94
Mouse Astrocytes, donor2.CNhs12078.11552-120C43.08
Mouse Astrocytes, donor3.CNhs12107.11633-122C41.44
Mouse CD19+ B Cells, donor1.CNhs13531.11856-125A20.67
Mouse CD4+ T Cells, donor1.CNhs13509.11854-124I90.00
Mouse CD8+ T Cells, donor1.CNhs13511.11855-125A10.34
Mouse Cardiac Myocytes, donor1.CNhs12355.11711-123C12.06
Mouse Cardiac Myocytes, donor2.CNhs12356.11729-123E12.29
Mouse Cardiac Myocytes, donor3.CNhs12353.11634-122C54.13
Mouse Granule cells, donor1.CNhs12131.11713-123C38.09
Mouse Granule cells, donor2.CNhs12357.11731-123E39.52
Mouse Granule cells, donor3.CNhs12108.11636-122C72.54
Mouse Meningeal cells, donor1.CNhs12132.11716-123C60.00
Mouse Meningeal cells, donor3.CNhs12109.11639-122D10.00
Mouse Mesenchymal stem cells - bone marrow derived, donor1.CNhs12628.11717-123C73.60
Mouse Mesenchymal stem cells - bone marrow derived, donor2.CNhs12633.11735-123E74.94
Mouse Mesenchymal stem cells - bone marrow derived, donor3.CNhs12616.11640-122D22.13
Mouse Microglia, donor1.CNhs12629.11718-123C82.40
Mouse Microglia, donor2.CNhs12634.11736-123E82.69
Mouse Neurons - cortical, donor1.CNhs12025.11724-123D55.81
Mouse Neurons - cortical, donor2.CNhs11947.11742-123F57.97
Mouse Neurons - cortical, donor3.CNhs12112.11647-122D96.31
Mouse Neurons - dorsal spinal cord, donor2.CNhs12635.11738-123F13.71
Mouse Neurons - dorsal spinal cord, donor3.CNhs12618.11643-122D52.65
Mouse Neurons - hippocampal, donor1.CNhs12133.11721-123D26.74
Mouse Neurons - hippocampal, donor2.CNhs12359.11739-123F27.76
Mouse Neurons - hippocampal, donor3.CNhs12110.11644-122D67.35
Mouse Neurons - raphe, donor1.CNhs12631.11722-123D31.10
Mouse Neurons - raphe, donor2.CNhs12636.11740-123F33.06
Mouse Neurons - raphe, donor3.CNhs12619.11645-122D72.61
Mouse Neurons - striatal, donor1.CNhs12134.11723-123D45.41
Mouse Neurons - striatal, donor2.CNhs12360.11741-123F45.03
Mouse Neurons - striatal, donor3.CNhs12111.11646-122D83.13
Mouse Neurons - substantia nigra, donor4, tech_rep1.CNhs12612.11489-119E45.03
Mouse Neurons - substantia nigra, donor5.CNhs12614.11490-119E57.32
Mouse Neurons - substantia nigra, donor6.CNhs12643.11770-123I64.28
Mouse Neurons - ventral spinal cord, donor1.CNhs12632.11725-123D62.65
Mouse Neurons - ventral spinal cord, donor2.CNhs12638.11743-123F63.56
Mouse Neurons - ventral spinal cord, donor3.CNhs12113.11648-122E17.08
Mouse Schwann, donor1.CNhs12507.11728-123D90.98
Mouse Schwann, donor2.CNhs12573.11746-123F90.60
Mouse hepatic Sinusoidal Endothelial Cells, donor1.CNhs13209.11830-124G33.77
Mouse hepatic Stellate Cells (lipocyte), donor1.CNhs13196.11825-124F75.16
Mouse hepatocyte, donor1.CNhs13078.11714-123C40.00
Mouse hepatocyte, donor3.CNhs12615.11637-122C85.40
Mouse hepatocyte, donor6.CNhs13090.11822-124F43.25
Mouse hepatocyte, donor8.CNhs13091.11824-124F62.24
SABiosciences XpressRef Mouse Universal Total RNA, pool1.CNhs10611.10003-101A74.07
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep1 (000hC4).CNhs11939.12338-130I71.70
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep2 (000hC5).CNhs13275.12460-132E31.30
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep3 (000hC6).CNhs13324.12582-133I81.77
Sox2+ Supporting cells - organ of corti, pool1.CNhs12532.12157-128G63.24
TSt-4/DLL1 feeder cells, biol_rep1.CNhs13407.12971-138H11.28
TSt-4/DLL1 feeder cells, biol_rep2.CNhs13408.12987-138I80.00
TSt-4/DLL1 feeder cells, biol_rep3.CNhs13409.13003-139B60.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep1.CNhs13739.13367-143G11.95
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep2.CNhs13740.13368-143G21.52
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep3.CNhs13741.13369-143G32.53
Universal RNA - Mouse Normal Tissues Biochain, pool1.CNhs10613.10008-101B63.88
accessory axillary lymph node, adult.CNhs10475.1063-29H90.52
adrenal gland, adult.CNhs10508.49-24D72.52
adrenal gland, embryo E14.CNhs11038.406-44C53.64
adrenal gland, embryo E16.CNhs11004.1254-43D61.83
adrenal gland, embryo E17.CNhs11043.1263-45I13.92
adrenal gland, embryo E18.CNhs11026.1262-18F53.32
adrenal gland, neonate N00.CNhs11191.1311-23C13.76
adrenal gland, neonate N25.CNhs11223.1377-27I34.40
amnion, adult pregnant day17.5.CNhs10488.583-22A81.24
aorta, adult.CNhs10498.46-23H13.61
bone (os femoris), adult.CNhs10483.56-12G20.88
bone (os femoris), neonate N02.CNhs11227.1985-43F53.24
bone (os femoris), neonate N16.CNhs11225.1525-43A63.31
bone (os femoris), neonate N20.CNhs11195.1350-25C32.91
cecum, adult.CNhs10467.37-13H41.86
cerebellum, adult.CNhs10494.15-8B22.93
cerebellum, neonate N30.CNhs11135.1395-42I26.07
colon, adult.CNhs10468.36-18H74.34
common myeloid progenitor CMP, biol_rep1.CNhs12550.12122-128C72.76
common myeloid progenitor CMP, biol_rep2.CNhs12203.12125-128D13.00
common myeloid progenitor CMP, biol_rep3.CNhs12551.12128-128D43.30
corpora quadrigemina, adult.CNhs10501.16-22A43.45
corpus striatum, adult.CNhs10487.19-21D84.58
corpus striatum, neonate N00.CNhs11226.630-43F14.40
cortex, adult.CNhs10473.12-14D51.91
cortex, neonate N30.CNhs11107.1392-42F22.30
diencephalon, adult.CNhs10482.20-12F21.87
diencephalon, neonate N30.CNhs11201.1388-42B22.60
epididymis and seminiferous tubule, neonate N00.CNhs11218.1310-23B14.68
epididymis and seminiferous tubule, neonate N30.CNhs11199.1387-42A22.99
epididymis, adult.CNhs10490.58-23B24.55
eyeball, adult.CNhs10484.31-12G44.84
eyeball, embryo E12.CNhs11016.345-16C61.95
eyeball, embryo E14.CNhs10521.399-16E21.38
eyeball, embryo E15.CNhs10593.426-16C91.80
eyeball, embryo E17.CNhs11023.1261-18D42.26
eyeball, neonate N00.CNhs11207.633-15C64.01
eyeball, neonate N01.CNhs11140.1532-43E73.59
eyeball, neonate N02.CNhs11205.1551-44G83.65
eyeball, neonate N16.CNhs11188.777-19A22.07
forelimb, embryo E11.CNhs10596.335-25E20.43
forelimb, embryo E12.CNhs10600.359-14H21.89
forelimb, embryo E13.CNhs10589.384-1E21.41
forelimb, embryo E14.CNhs10577.413-26A82.41
forelimb, embryo E15.CNhs11007.437-20E71.95
forelimb, embryo E17.CNhs10598.1517-43C41.39
forelimb, embryo E18.CNhs11008.1520-43B51.03
gonad, embryo E13.CNhs11044.1564-45I63.18
granulocyte macrophage progenitor GMP, biol_rep1.CNhs12206.12123-128C80.70
granulocyte macrophage progenitor GMP, biol_rep2.CNhs12202.12126-128D23.09
granulocyte macrophage progenitor GMP, biol_rep3.CNhs11928.12129-128D53.41
heart, embryo E11.CNhs10586.331-24E90.62
heart, embryo E12.CNhs11015.353-12F52.11
heart, embryo E13.CNhs11013.376-3I92.52
heart, embryo E14.CNhs10597.403-26D42.60
heart, embryo E15.CNhs11017.431-16C81.38
heart, embryo E16.CNhs11021.457-17C64.01
heart, embryo E17.CNhs11025.479-18E52.09
heart, embryo E18.CNhs11030.1283-20G34.02
heart, neonate N00.CNhs11213.639-21E35.25
heart, neonate N03.CNhs11221.1349-25I24.77
heart, neonate N10.CNhs11118.749-24G16.24
heart, neonate N16.CNhs11209.782-15G17.13
heart, neonate N20.CNhs11127.821-26I66.58
heart, neonate N25.CNhs11196.1351-25D36.59
heart, neonate N30.CNhs11202.1390-42D26.84
hippocampus, adult.CNhs10478.13-16E83.79
hippocampus, neonate N00.CNhs11228.627-43G17.10
intestinal mucosa, adult.CNhs10506.860-29I32.31
intestine, adult.CNhs10496.178-9A31.59
intestine, embryo E12.CNhs11019.1251-16I50.85
intestine, embryo E13.CNhs11010.381-16D52.32
intestine, embryo E15.CNhs10602.976-16D81.68
intestine, embryo E16.CNhs10585.463-22H42.22
intestine, embryo E17.CNhs10582.482-18D31.56
intestine, embryo E18.CNhs10526.1289-20F71.14
intestine, neonate N00.CNhs11126.644-26D14.27
intestine, neonate N01.CNhs11192.1322-23E93.79
intestine, neonate N06.CNhs11102.688-20B82.51
intestine, neonate N07.CNhs11095.720-20F25.17
intestine, neonate N10.CNhs11098.755-23A53.12
intestine, neonate N20.CNhs11187.827-18D11.80
intestine, neonate N25.CNhs11121.1352-25E33.24
intestine, neonate N30.CNhs11131.1384-42G14.78
kidney, embryo E14.CNhs10606.411-4I93.60
kidney, embryo E15.CNhs10997.434-16F83.43
kidney, embryo E16.CNhs10584.464-22A51.13
kidney, embryo E17.CNhs11028.483-18I23.67
kidney, embryo E18.CNhs11001.1288-20C73.49
kidney, neonate N00.CNhs11214.646-21G73.16
kidney, neonate N10.CNhs11206.758-6D53.73
kidney, neonate N20.CNhs11113.832-19I13.69
kidney, neonate N25.CNhs11122.1353-25F34.55
kidney, neonate N30.CNhs11203.1385-42H15.18
liver, adult pregnant day01.CNhs10466.508-5B24.15
liver, embryo E12.CNhs10601.355-15F81.84
liver, embryo E13.CNhs10524.378-3H61.97
liver, embryo E14.CNhs10594.409-16E12.92
liver, embryo E15.CNhs10520.433-16D72.64
liver, embryo E16.CNhs10523.462-17F52.17
liver, embryo E17.CNhs10510.481-18A32.04
liver, embryo E18.CNhs10579.499-43G43.74
liver, neonate N00.CNhs11117.641-24F41.46
liver, neonate N03.CNhs11123.1345-25G23.02
liver, neonate N06.CNhs11101.684-20A80.00
liver, neonate N07.CNhs11103.716-20H24.84
liver, neonate N10.CNhs11115.751-24B93.74
liver, neonate N20.CNhs11220.823-25A33.79
liver, neonate N25.CNhs11198.1368-26H12.33
liver, neonate N30.CNhs11106.1382-42D17.72
lung, adult.CNhs10474.28-22B13.70
lung, embryo E12.CNhs10522.354-16G22.08
lung, embryo E14.CNhs10604.404-26F82.12
lung, embryo E15.CNhs11020.432-17C52.55
lung, embryo E16.CNhs10998.458-17B62.35
lung, embryo E17.CNhs10605.480-44A62.01
lung, embryo E18.CNhs10583.1287-20I63.57
lung, neonate N00.CNhs11224.640-42C62.54
lung, neonate N06.CNhs11212.683-20E52.84
lung, neonate N07.CNhs11111.715-19A33.10
lung, neonate N10.CNhs11219.750-23E63.03
lung, neonate N20.CNhs11109.822-18A42.95
lung, neonate N25.CNhs11119.1359-25C72.76
lung, neonate N30.CNhs11133.1394-42H22.75
macrophage, bone marrow derived, pool1.CNhs11457.3560-170A13.02
macrophage, bone marrow derived, pool2.CNhs11532.3632-171A11.09
mammary gland, adult lactating day02.CNhs10480.595-22B60.49
mammary gland, adult pregnant day19.CNhs10476.588-5H24.41
medulla oblongata, adult.CNhs10477.17-12C23.37
medulla oblongata, neonate N30.CNhs11200.1396-42A33.16
mouse fibroblast cell line: CRL-1658 NIH/3T3.CNhs11093.1830-49C70.49
muscle (biceps femoris), neonate N30.CNhs11129.1389-42C26.82
neurospheres - enteric neuron derived, biol_rep1.CNhs13087.11810-124E11.89
neurospheres - enteric neuron derived, biol_rep2.CNhs13088.11811-124E21.95
neurospheres - enteric neuron derived, biol_rep3.CNhs13089.11812-124E31.94
neurospheres - parasympathetic neuron derived, biol_rep1.CNhs13084.11807-124D72.39
neurospheres - parasympathetic neuron derived, biol_rep2.CNhs13085.11808-124D81.34
neurospheres - parasympathetic neuron derived, biol_rep3.CNhs13086.11809-124D91.98
neurospheres - sympathetic neuron derived, biol_rep1.CNhs13081.11804-124D42.02
neurospheres - sympathetic neuron derived, biol_rep2.CNhs13082.11805-124D51.75
neurospheres - sympathetic neuron derived, biol_rep3.CNhs13083.11806-124D61.58
olfactory brain, adult.CNhs10489.18-22I92.25
ovary, adult.CNhs10507.91-2I72.41
ovary, embryo E18.CNhs11040.505-44H75.34
ovary, neonate N00.CNhs11217.1299-22I45.05
oviduct, adult pregnant day01.CNhs10500.988-6G62.80
pancreas, adult.CNhs10486.34-16E41.33
pancreas, embryo E14.CNhs11012.405-44F41.21
pancreas, embryo E15.CNhs11042.1556-45F22.72
pancreas, embryo E16.CNhs11003.460-26E50.75
pancreas, embryo E17.CNhs10599.1558-45G30.89
pancreas, embryo E18.CNhs10580.1535-43I73.07
pancreas, neonate N00.CNhs11105.645-26G91.55
pancreas, neonate N01.CNhs11138.1531-43D72.18
pancreas, neonate N02.CNhs11139.1539-43D83.21
pancreas, neonate N16.CNhs11136.787-43B60.00
pancreas, neonate N25.CNhs11094.1555-45E20.00
pancreas, neonate N30.CNhs11182.1548-44H51.03
pituitary gland, adult.CNhs10493.21-1G83.74
pituitary gland, embryo E12.CNhs11018.346-16E61.62
pituitary gland, embryo E13.CNhs11009.370-44C72.85
pituitary gland, embryo E14.CNhs11037.398-44A54.07
pituitary gland, embryo E15.CNhs10592.427-16B93.90
pituitary gland, embryo E16.CNhs11036.449-43F64.46
pituitary gland, embryo E17.CNhs11039.1265-44F54.44
pituitary gland, neonate N00.CNhs11190.1308-22E95.78
placenta, adult pregnant day10.CNhs10472.539-13I71.88
placenta, adult pregnant day17.CNhs10464.577-18G32.75
prostate, adult.CNhs10470.859-1F83.53
skin, adult.CNhs10492.30-1C32.47
skin, neonate N00.CNhs11124.650-25G43.23
skin, neonate N03.CNhs11215.662-22H32.11
skin, neonate N06.CNhs11097.693-20I51.91
skin, neonate N10.CNhs11108.762-6C42.13
small intestine, neonate N16.CNhs11114.790-21I14.08
spinal cord, adult.CNhs10505.24-13C94.26
spleen, adult.CNhs10465.25-2G23.08
spleen, embryo E16.CNhs11035.461-43C12.06
spleen, embryo E18.CNhs11011.1271-21F22.78
spleen, neonate N10.CNhs11116.752-24D11.51
spleen, neonate N20.CNhs11112.824-19H12.46
spleen, neonate N25.CNhs11099.1354-25G31.14
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep1.CNhs12534.12121-128C62.38
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep2.CNhs12535.12124-128C92.38
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep3.CNhs12536.12127-128D31.24
stomach, adult.CNhs10503.33-1H63.82
stomach, embryo E12.CNhs10588.356-43E30.16
stomach, embryo E15.CNhs10603.1252-16G82.24
stomach, embryo E16.CNhs11022.459-17D43.13
stomach, embryo E17.CNhs11006.1035-18D53.14
stomach, embryo E18.CNhs10999.1286-20C61.53
stomach, neonate N03.CNhs11193.1340-24B83.51
stomach, neonate N07.CNhs11210.718-18A93.47
stomach, neonate N25.CNhs11104.1355-25E42.62
stomach, neonate N30.CNhs11134.1386-42I14.28
submandibular gland, adult.CNhs10469.59-29C16.83
testis, adult.CNhs10504.57-7G50.00
testis, embryo E13.CNhs11031.389-23F51.79
testis, embryo E15.CNhs11034.443-27C52.32
testis, embryo E16.CNhs11033.470-26G52.53
testis, embryo E17.CNhs11029.486-18I54.13
testis, embryo E18.CNhs11027.503-18G52.20
testis, neonate N00.CNhs11189.1300-22B75.16
testis, neonate N07.CNhs11222.726-26I42.47
testis, neonate N10.CNhs11204.763-44D91.89
testis, neonate N20.CNhs11110.839-18H30.00
testis, neonate N30.CNhs11130.1391-42E20.58
thymus, adult.CNhs10471.38-12B53.48
thymus, embryo E14.CNhs11041.402-44I45.88
thymus, embryo E15.CNhs11005.430-45I22.98
thymus, embryo E16.CNhs11002.456-26C53.51
thymus, embryo E17.CNhs10581.478-18C13.58
thymus, embryo E18.CNhs10595.1273-19G42.98
thymus, neonate N02.CNhs11181.1541-43F84.57
thymus, neonate N03.CNhs11137.2104-43C74.14
thymus, neonate N06.CNhs11197.681-26C46.56
thymus, neonate N07.CNhs11211.713-19D35.26
thymus, neonate N10.CNhs11194.748-24E45.95
thymus, neonate N20.CNhs11186.820-7A24.19
thymus, neonate N25.CNhs11125.1362-25G75.58
thymus, neonate N30.CNhs11132.1393-42G23.97
tongue, adult.CNhs10499.32-1B44.31
trophoblast stem cell line B1 differentiation, day00, biol_rep1.CNhs13526.13297-142H30.44
trophoblast stem cell line R1AB differentiation, day00, biol_rep1.CNhs13481.13283-142F70.18
trophoblast stem cell line Rybp differentiation, day00, biol_rep1.CNhs13519.13290-142G50.34
urinary bladder, adult.CNhs10481.879-12E45.80
uterus, adult pregnant day19.CNhs10497.590-15F52.44
uterus, adult.CNhs10509.92-27E52.93
vagina, adult.CNhs10502.89-27D52.57
vesicular gland, adult.CNhs10491.51-27F83.01
visual cortex - wildtype, neonate N15, donor1.CNhs13031.10235-104A13.39
visual cortex - wildtype, neonate N15, donor2.CNhs13032.10236-104A21.38
visual cortex - wildtype, neonate N15, donor3.CNhs13033.10237-104A32.29
visual cortex - wildtype, neonate N15, donor5.CNhs13820.10349-105D72.23
visual cortex - wildtype, neonate N30, donor1.CNhs13034.10238-104A43.43
visual cortex - wildtype, neonate N30, donor2.CNhs13035.10239-104A52.27
visual cortex - wildtype, neonate N30, donor3.CNhs13036.10240-104A62.03
visual cortex - wildtype, neonate N60-70, donor1.CNhs13037.10241-104A72.25
visual cortex - wildtype, neonate N60-70, donor2.CNhs13038.10242-104A81.36
visual cortex - wildtype, neonate N60-70, donor3.CNhs13039.10243-104A92.07
whole body, embryo E11.CNhs11014.324-5I82.08
whole body, embryo E12.CNhs10587.857-27C91.20
whole body, embryo E13.CNhs10512.372-23H21.88
whole body, embryo E14.5.CNhs10578.420-27D21.70
whole body, embryo E14.CNhs10519.395-14B12.10
whole body, embryo E16.CNhs10514.453-14F22.57
whole body, embryo E17.5, pool1 (internal control).CNhs10479.3139-67G51.56
whole body, embryo E17.5, pool1 (internal control).CNhs10495.3139-67G53.71
whole body, embryo E17.5, pool1 (internal control).CNhs10511.3139-67G51.93
whole body, embryo E17.5, pool1 (internal control).CNhs10527.3139-67G52.02
whole body, embryo E17.5, pool1 (internal control).CNhs10591.3139-67G52.28
whole body, embryo E17.5, pool1 (internal control).CNhs10607.3139-67G52.26
whole body, embryo E17.5, pool1 (internal control).CNhs10623.3139-67G52.62
whole body, embryo E17.5, pool1 (internal control).CNhs10639.3139-67G53.14
whole body, embryo E17.5, pool1 (internal control).CNhs10655.3139-67G52.07
whole body, embryo E17.5, pool1 (internal control).CNhs10725.3139-67G53.81
whole body, embryo E17.5, pool1 (internal control).CNhs10749.3139-67G52.67
whole body, embryo E17.5, pool1 (internal control).CNhs10840.3139-67G52.51
whole body, embryo E17.5, pool1 (internal control).CNhs10856.3139-67G53.30
whole body, embryo E17.5, pool1 (internal control).CNhs10880.3139-67G51.91
whole body, embryo E17.5, pool1 (internal control).CNhs11000.3139-67G53.77
whole body, embryo E17.5, pool1 (internal control).CNhs11024.3139-67G52.31
whole body, embryo E17.5, pool1 (internal control).CNhs11032.3139-67G53.58
whole body, embryo E17.5, pool1 (internal control).CNhs11048.3139-67G52.03
whole body, embryo E17.5, pool1 (internal control).CNhs11072.3139-67G52.92
whole body, embryo E17.5, pool1 (internal control).CNhs11080.3139-67G52.62
whole body, embryo E17.5, pool1 (internal control).CNhs11096.3139-67G51.83
whole body, embryo E17.5, pool1 (internal control).CNhs11120.3139-67G51.32
whole body, embryo E17.5, pool1 (internal control).CNhs11128.3139-67G51.36
whole body, embryo E17.5, pool1 (internal control).CNhs11184.3139-67G52.24
whole body, embryo E17.5, pool1 (internal control).CNhs11208.3139-67G53.32
whole body, embryo E17.5, pool1 (internal control).CNhs11216.3139-67G52.76
whole body, embryo E17.5, pool1 (internal control).CNhs11246.3139-67G52.05
whole body, embryo E17.5, pool1 (internal control).CNhs11278.3139-67G52.63
whole body, embryo E17.5.CNhs10513.490-9F92.12
whole body, embryo E17.CNhs10517.475-3I54.75
whole body, embryo E18.CNhs10516.493-3B32.34
whole body, neonate N00.CNhs10525.657-19C23.65
whole body, neonate N01.CNhs10576.659-23C64.02
whole body, neonate N06.CNhs10515.692-21D13.31
whole body, neonate N10.CNhs10518.761-6B43.71





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Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data

Cell type
Ontology termp-valuen
CNS neuron (sensu Vertebrata)4.83e-0723
neuroblast (sensu Vertebrata)4.83e-0723

Uber anatomy
Ontology termp-valuen
anatomical conduit1.73e-09122
structure with developmental contribution from neural crest2.42e-0892
tube5.51e-08114
neural tube4.19e-0752
neural rod4.19e-0752
future spinal cord4.19e-0752
neural keel4.19e-0752







Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process. Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process. Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.

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