FFCP PHASE1:Mm9::chrX:12649180..12649195,+: Difference between revisions
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{{FFCP | {{FFCP|EntrezGene=NA|HGNC=|MCL_coexpression_id=374|UniProt=NA|association_with_transcript=NA|description=CAGE_peak_at_chrX:12649180..12649195,+|id=chrX:12649180..12649195,+|ontology_enrichment_celltype=CL:0000838!1.84e-07!12;CL:0000988!3.30e-07!32;CL:0002032!3.30e-07!32;CL:0000037!3.30e-07!32;CL:0000566!3.30e-07!32;CL:0000837!3.30e-07!32;CL:0000542!6.03e-07!13;CL:0000051!6.03e-07!13;CL:0000084!6.70e-07!11;CL:0000827!6.70e-07!11|ontology_enrichment_celltype_v019_2=CL:0000838,5.34e-08,12;CL:0000542,1.95e-07,13;CL:0000051,1.95e-07,13;CL:0000084,2.19e-07,11;CL:0000827,2.19e-07,11;CL:0000988,2.55e-07,32;CL:0002032,2.55e-07,32;CL:0000037,2.55e-07,32;CL:0000837,2.55e-07,32;CL:0000791,7.26e-07,9;CL:0000789,7.26e-07,9;CL:0002420,7.26e-07,9;CL:0002419,7.26e-07,9;CL:0000790,7.26e-07,9|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=|ontology_enrichment_uberon_v019_2=|phase1_expression=2.88267924788629,2.09385244583617,3.63999391511629,1.51232105653415,0,2.18243053485457,1.16806320297763,2.32421982194837,9.43284438416167,7.95819389494778,3.25314139628459,3.35043067780413,3.0816131387617,2.71003247498892,0.999329285446988,0.809901069559304,0,2.20823515750766,2.05671650408608,2.12194825899015,1.36069264241712,3.3758923408301,1.56719873483361,1.11994695955385,1.14704640533585,0.57423196411502,0,0.430942465371778,0.760093677825496,1.76421090831952,1.77384408524244,0.635030673459631,2.46025915033828,0,1.1554064790051,1.16364251750945,1.63335485009895,2.09265815368454,3.1253413780952,2.09409497589519,7.05877785637217,7.5135003345429,3.88408282424923,1.76255545165808,2.43304634926835,2.56965453026354,0,0,0.219686182734472,0.972149495371417,0.139986421625363,0,3.6912173332702,10.8804321301702,6.04968838456435,0.771778308107841,1.14613375975503,0.515672092277442,0.202316460859598,0,0,0.338844532069132,0,0.449949858640699,3.9554654502679,2.8419204597844,0.898800331555214,0.768436610643109,0.103689612308478,0,0,0.285650984403804,0.220868540951614,0.244981598429908,0.191690942036473,0,1.10115880999389,1.53224805702225,1.68967186581868,0.527545150920775,0.457438218012048,0,1.11673199600552,0.56276261003168,1.83357897332172,0.589257170947335,0.996601765593721,0.186399445825301,0.832988126665025,2.04043212288321,2.6087803983151,0,1.3599426674155,2.15881276655127,0.649776417447669,1.79210754838934,1.26399978118577,1.87473354835864,0.779358013808606,0.35333957451034,1.69012103732017,2.56652954828636,0,0,1.5154372870785,1.52015919285059,2.02209778005913,1.59857431606684,2.58937883647172,2.3750742250372,1.21439728736295,0.304465478312141,1.38369298353635,1.05505848386836,2.23418543557839,0.879666139307728,2.47194967734374,1.87979163995885,1.76922110389975,1.7794353494215,1.32504911076236,0.484875253135222,0,0.878342391034642,1.8850203613211,1.02182822083437,9.22576458695586,5.99902730993408,6.60765180779936,0.748953197024114,0,1.38219787324151,1.21677024134594,1.53429274398198,2.0778804455956,1.1356888414743,2.13862664085664,1.24406970610093,2.77995034277042,2.52530227063769,0.390361328888111,0.229902104433473,0.720248519221397,2.10986744970001,1.42876648217788,0.768682321709099,1.59292931751539,0.776110112217047,0.862271971731369,1.32374256117473,0.527853372491847,0.219195732427575,1.11218899690239,0.696504333044333,1.64625709126355,0.796137067273973,2.80885274925294,1.80143534980301,4.26245249093389,0.414251545071004,0.938104239924385,1.80062061461015,0.23674473558521,0.393528463494808,1.85120535464854,0.465067889500816,1.60964040839772,2.10177616260905,1.48103864922132,1.14917224855367,1.21603214318784,0.877199924551994,1.3173006917463,1.61047702512446,1.47202963994889,0.308713837137853,1.32167513193519,0.528901133327089,1.06644125267617,0.928946687441754,0.77320476793256,0.201683524623343,0.889512175379481,0.760902504450237,2.84717436926707,2.14108641141214,1.75934646160189,1.39269530428806,1.36474860983384,0.898819408654221,1.29682829924817,2.19055400579804,0,1.14248512609729,0,1.4255592949172,1.16371492300575,1.8936671370386,1.70738650235495,2.06654207171443,2.04098346193787,2.09775178667061,1.77871576252289,0.500535317148282,0.982794975566015,0.899448449539415,1.01430060694251,0.964708639009667,1.2731292589071,0.287696137450811,3.24270453550071,0.549122826376163,0,1.11642284300551,3.74445207737473,1.26289438973556,0.358794827043824,0.964887042726734,2.58654466233247,0.947457058852424,1.14075483509418,0.509235257325564,0.938760993154008,1.84256883185997,0.952174563544055,2.92700471786698,1.57635144106191,1.10732344824387,1.75400245523236,0.81931657357869,1.89953480052485,2.89298117163023,1.50791283939272,8.70249094109935,3.44234991113325,3.31124095565679,0.642202359951168,0.820481806145422,1.63934945376675,1.51482556322624,0.315508219416257,1.56175497718655,0.646270193198397,1.67278158566786,2.22798674082394,1.98153571552183,0.809621403349789,0.584511715822624,0.790575555893047,1.28528526568723,2.41298144854057,0.534196811001766,1.14020871547503,1.31976098378028,0,0.485561272309963,0.6046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| ||
|EntrezGene=NA | |||
|HGNC= | |||
|MCL_coexpression_id=374 | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|description=CAGE_peak_at_chrX:12649180..12649195,+ | |||
|id=chrX:12649180..12649195,+ | |||
|ontology_enrichment_celltype=CL:0000838!1.84e-07!12;CL:0000988!3.30e-07!32;CL:0002032!3.30e-07!32;CL:0000037!3.30e-07!32;CL:0000566!3.30e-07!32;CL:0000837!3.30e-07!32;CL:0000542!6.03e-07!13;CL:0000051!6.03e-07!13;CL:0000084!6.70e-07!11;CL:0000827!6.70e-07!11 | |||
|ontology_enrichment_celltype_v019_2=CL:0000838,5.34e-08,12;CL:0000542,1.95e-07,13;CL:0000051,1.95e-07,13;CL:0000084,2.19e-07,11;CL:0000827,2.19e-07,11;CL:0000988,2.55e-07,32;CL:0002032,2.55e-07,32;CL:0000037,2.55e-07,32;CL:0000837,2.55e-07,32;CL:0000791,7.26e-07,9;CL:0000789,7.26e-07,9;CL:0002420,7.26e-07,9;CL:0002419,7.26e-07,9;CL:0000790,7.26e-07,9 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon= | |||
|ontology_enrichment_uberon_v019_2= | |||
|phase1_expression=2.88267924788629,2.09385244583617,3.63999391511629,1.51232105653415,0,2.18243053485457,1.16806320297763,2.32421982194837,9.43284438416167,7.95819389494778,3.25314139628459,3.35043067780413,3.0816131387617,2.71003247498892,0.999329285446988,0.809901069559304,0,2.20823515750766,2.05671650408608,2.12194825899015,1.36069264241712,3.3758923408301,1.56719873483361,1.11994695955385,1.14704640533585,0.57423196411502,0,0.430942465371778,0.760093677825496,1.76421090831952,1.77384408524244,0.635030673459631,2.46025915033828,0,1.1554064790051,1.16364251750945,1.63335485009895,2.09265815368454,3.1253413780952,2.09409497589519,7.05877785637217,7.5135003345429,3.88408282424923,1.76255545165808,2.43304634926835,2.56965453026354,0,0,0.219686182734472,0.972149495371417,0.139986421625363,0,3.6912173332702,10.8804321301702,6.04968838456435,0.771778308107841,1.14613375975503,0.515672092277442,0.202316460859598,0,0,0.338844532069132,0,0.449949858640699,3.9554654502679,2.8419204597844,0.898800331555214,0.768436610643109,0.103689612308478,0,0,0.285650984403804,0.220868540951614,0.244981598429908,0.191690942036473,0,1.10115880999389,1.53224805702225,1.68967186581868,0.527545150920775,0.457438218012048,0,1.11673199600552,0.56276261003168,1.83357897332172,0.589257170947335,0.996601765593721,0.186399445825301,0.832988126665025,2.04043212288321,2.6087803983151,0,1.3599426674155,2.15881276655127,0.649776417447669,1.79210754838934,1.26399978118577,1.87473354835864,0.779358013808606,0.35333957451034,1.69012103732017,2.56652954828636,0,0,1.5154372870785,1.52015919285059,2.02209778005913,1.59857431606684,2.58937883647172,2.3750742250372,1.21439728736295,0.304465478312141,1.38369298353635,1.05505848386836,2.23418543557839,0.879666139307728,2.47194967734374,1.87979163995885,1.76922110389975,1.7794353494215,1.32504911076236,0.484875253135222,0,0.878342391034642,1.8850203613211,1.02182822083437,9.22576458695586,5.99902730993408,6.60765180779936,0.748953197024114,0,1.38219787324151,1.21677024134594,1.53429274398198,2.0778804455956,1.1356888414743,2.13862664085664,1.24406970610093,2.77995034277042,2.52530227063769,0.390361328888111,0.229902104433473,0.720248519221397,2.10986744970001,1.42876648217788,0.768682321709099,1.59292931751539,0.776110112217047,0.862271971731369,1.32374256117473,0.527853372491847,0.219195732427575,1.11218899690239,0.696504333044333,1.64625709126355,0.796137067273973,2.80885274925294,1.80143534980301,4.26245249093389,0.414251545071004,0.938104239924385,1.80062061461015,0.23674473558521,0.393528463494808,1.85120535464854,0.465067889500816,1.60964040839772,2.10177616260905,1.48103864922132,1.14917224855367,1.21603214318784,0.877199924551994,1.3173006917463,1.61047702512446,1.47202963994889,0.308713837137853,1.32167513193519,0.528901133327089,1.06644125267617,0.928946687441754,0.77320476793256,0.201683524623343,0.889512175379481,0.760902504450237,2.84717436926707,2.14108641141214,1.75934646160189,1.39269530428806,1.36474860983384,0.898819408654221,1.29682829924817,2.19055400579804,0,1.14248512609729,0,1.4255592949172,1.16371492300575,1.8936671370386,1.70738650235495,2.06654207171443,2.04098346193787,2.09775178667061,1.77871576252289,0.500535317148282,0.982794975566015,0.899448449539415,1.01430060694251,0.964708639009667,1.2731292589071,0.287696137450811,3.24270453550071,0.549122826376163,0,1.11642284300551,3.74445207737473,1.26289438973556,0.358794827043824,0.964887042726734,2.58654466233247,0.947457058852424,1.14075483509418,0.509235257325564,0.938760993154008,1.84256883185997,0.952174563544055,2.92700471786698,1.57635144106191,1.10732344824387,1.75400245523236,0.81931657357869,1.89953480052485,2.89298117163023,1.50791283939272,8.70249094109935,3.44234991113325,3.31124095565679,0.642202359951168,0.820481806145422,1.63934945376675,1.51482556322624,0.315508219416257,1.56175497718655,0.646270193198397,1.67278158566786,2.22798674082394,1.98153571552183,0.809621403349789,0.584511715822624,0.790575555893047,1.28528526568723,2.41298144854057,0.534196811001766,1.14020871547503,1.31976098378028,0,0.485561272309963,0.604647113929502,1.69744571780308,0,0.307435147943927,2.06742634534577,0.727067458955011,0.712994756769443,1.58018378967908,3.16255825724996,3.09406629744561,1.70219802876894,1.08036656418786,0.258717367565509,1.07168517515796,0.709360934569094,0.891844088010353,1.48094118541909,0.608929898229199,4.22409074514679,4.2366414172764,3.08739757276947,1.48397627647332,2.09903754704677,1.74907482291652,1.3130957840345,1.14898629821543,1.1659233465194,0.741701208042039,1.36696704638282,0.619160603889667,0.555583582109135,0.565105371014073,0.820165366326151,1.37266903923914,12.2384469595576,10.3564074719507,11.6087977995716,0,1.10717597753397,1.42323626988794,0.756037385752609,1.46361807210128,0.87345025498471,0.944050424693745,2.14898984885873,0.523511883968059,1.03691978633434,2.4853572523477,0.56369293868419,0.299033092087958,0.66183396182839,0.388902376688095,1.16243841129958,0.506868376472335,1.4082868637490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| |||
|short_description=p@chrX:12649180..12649195,+ | |||
}} |
Revision as of 19:16, 14 September 2013
Short description: | p@chrX:12649180..12649195, + |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chrX:12649180..12649195, + |
Coexpression cluster: | MCL_coexpression_mm9:374 |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
lymphoid lineage restricted progenitor cell | 5.34e-08 | 12 |
lymphocyte | 1.95e-07 | 13 |
common lymphoid progenitor | 1.95e-07 | 13 |
T cell | 2.19e-07 | 11 |
pro-T cell | 2.19e-07 | 11 |
hematopoietic cell | 2.55e-07 | 32 |
hematopoietic oligopotent progenitor cell | 2.55e-07 | 32 |
hematopoietic stem cell | 2.55e-07 | 32 |
hematopoietic multipotent progenitor cell | 2.55e-07 | 32 |
mature alpha-beta T cell | 7.26e-07 | 9 |
alpha-beta T cell | 7.26e-07 | 9 |
immature T cell | 7.26e-07 | 9 |
mature T cell | 7.26e-07 | 9 |
immature alpha-beta T cell | 7.26e-07 | 9 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.