FFCP PHASE1:Mm9::chrX:148235556..148235626,+: Difference between revisions
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{{FFCP | {{FFCP|EntrezGene=59026|HGNC=|MCL_coexpression_id=321|UniProt=|association_with_transcript=-230bp_to_ENSMUST00000152757_5end|description=CAGE_peak_5_at_Huwe1_5end|id=chrX:148235556..148235626,+|ontology_enrichment_celltype=CL:0000540!4.10e-09!33;CL:0000047!4.10e-09!33;CL:0000031!4.10e-09!33;CL:0000404!4.10e-09!33;CL:0000117!2.47e-07!23;CL:0000337!2.47e-07!23;CL:0000393!7.76e-07!39;CL:0000211!7.76e-07!39|ontology_enrichment_celltype_v019_2=CL:0000540,3.35e-09,33;CL:0000047,3.35e-09,33;CL:0000031,3.35e-09,33;CL:0000404,3.35e-09,33;CL:0000117,2.11e-07,23;CL:0000337,2.11e-07,23;CL:0000393,7.15e-07,39;CL:0000211,7.15e-07,39|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0000033!3.86e-16!63;UBERON:0004121!1.00e-15!102;UBERON:0000924!1.00e-15!102;UBERON:0006601!1.00e-15!102;UBERON:0001017!2.86e-15!73;UBERON:0005743!2.86e-15!73;UBERON:0002346!5.47e-15!71;UBERON:0003075!5.47e-15!71;UBERON:0007284!5.47e-15!71;UBERON:0000073!3.81e-14!75;UBERON:0001016!3.81e-14!75;UBERON:0003056!3.49e-13!49;UBERON:0000955!5.57e-13!50;UBERON:0006238!5.57e-13!50;UBERON:0001049!1.33e-12!52;UBERON:0005068!1.33e-12!52;UBERON:0006241!1.33e-12!52;UBERON:0007135!1.33e-12!52;UBERON:0002616!2.03e-12!49;UBERON:0003080!1.92e-10!40;UBERON:0000153!3.16e-10!94;UBERON:0002780!5.99e-10!39;UBERON:0001890!5.99e-10!39;UBERON:0006240!5.99e-10!39;UBERON:0007811!7.19e-09!86;UBERON:0002020!3.09e-08!34;UBERON:0002791!8.18e-07!29;UBERON:0003528!8.18e-07!29;UBERON:0001893!8.18e-07!29|ontology_enrichment_uberon_v019_2=UBERON:0010371,3.31e-16,73;UBERON:0002346,3.58e-16,64;UBERON:0003075,3.58e-16,64;UBERON:0007284,3.58e-16,64;UBERON:0004121,6.93e-16,95;UBERON:0000924,6.93e-16,95;UBERON:0006601,6.93e-16,95;UBERON:0001017,3.50e-15,73;UBERON:0000073,4.39e-14,54;UBERON:0001016,5.86e-14,75;UBERON:0003056,2.55e-13,49;UBERON:0001049,1.16e-12,52;UBERON:0005068,1.16e-12,52;UBERON:0006241,1.16e-12,52;UBERON:0007135,1.16e-12,52;UBERON:0000955,6.62e-12,47;UBERON:0006238,6.62e-12,47;UBERON:0010314,7.72e-12,92;UBERON:0002616,2.37e-11,46;UBERON:0003080,1.51e-10,40;UBERON:0002780,4.79e-10,39;UBERON:0001890,4.79e-10,39;UBERON:0006240,4.79e-10,39;UBERON:0002020,2.58e-08,34;UBERON:0003528,7.10e-07,29;UBERON:0002791,7.10e-07,29;UBERON:0001893,7.10e-07,29|phase1_expression=5.44506080156299,0,0.909998478779072,0,0,2.01455126294268,1.16806320297763,1.54947988129892,0.140788722151667,0.70219357896598,0.171217968225505,0.0797721589953364,0.513602189793617,0.34968160967599,0.666219523631325,0.404950534779652,0,0.157731082679119,0.137114433605739,0.84877930359606,3.23164502574065,0.992909512008853,1.56719873483361,0,0.45881856213434,0,1.29228598847722,0.430942465371778,0,1.00812051903972,0.665191531965914,3.17515336729816,0,0,1.73310971850765,0.332469290716985,0.612508068787107,0,0,0,0,0,0,3.14742044938943,2.53442328048786,3.48738829107195,3.9119567217402,0.65407546914134,1.31811709640683,1.74986909166855,0.979904951377538,0,0.167782606057736,0,1.34437519656986,0,0.85960031981627,0.515672092277442,7.48570905180512,4.7609188134483,8.87363964908651,1.0165335962074,3.55717918444456,0,0,0,0.898800331555214,1.15265491596466,6.53244557543409,4.18518408828241,4.41682418837902,5.14171771926846,1.32521124570968,5.14461356702807,5.46319184803947,3.67687514644008,4.40463523997555,5.61824287574826,7.0659005297872,7.64940468835124,5.85520919055422,5.2091337055676,1.95428099300967,2.25105044012672,4.88954392885792,7.95497180778903,10.6778760599327,8.38797506213853,0.832988126665025,1.058001841495,3.18850937571846,0,0,1.61910957491345,0.649776417447669,0.896053774194671,0.702222100658759,2.04516387093669,1.55871602761721,0,5.21120653173718,1.28326477414318,5.09610479413291,0,0.865964164044856,0.506719730950197,0,1.37020655662872,1.55362730188303,2.67195850316685,2.77576522825817,2.13125834818499,3.45923245884088,2.56228488939458,3.05730638552832,1.63366568728578,0.988779870937496,2.16899035379867,0,1.7794353494215,2.42925670306433,0.484875253135222,0,8.78342391034641,8.79676168616511,0.255457055208591,1.91704199209472,0.599902730993408,1.27070227073065,7.04016005202667,7.32000964509802,6.28271760564322,4.69325664519146,7.16003280524926,6.85700547046548,7.62533936418461,4.48093200941392,2.36373244159177,3.0326731012041,1.89397670297827,7.026503919986,5.28774840196988,5.22180176435513,5.12396380641431,7.14383241088942,6.66191345481219,5.80950692270319,4.39795730256327,8.40715172438085,7.37513712654495,11.0849208223288,2.6303487891309,5.83899223373756,2.78601733217733,2.67516777330327,6.96619933864726,0,2.05878325691772,1.42081749697796,4.34964122324554,4.92504725960302,3.24111710629827,3.31442629819294,1.77087808572663,2.46827380619805,2.55787339225449,2.68273401399619,3.38619492864792,1.6455984991348,1.80584210487005,1.4592385718254,1.75439984910399,1.3173006917463,2.28150911892632,4.20579897128254,6.79170441703277,0.330418782983798,1.05780226665418,6.61193576659225,8.36052018697579,4.38149368495117,2.42020229548011,2.89091456998331,2.09248188723815,0,1.31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| ||
|EntrezGene=59026 | |||
|HGNC= | |||
|MCL_coexpression_id=321 | |||
|UniProt= | |||
|association_with_transcript=-230bp_to_ENSMUST00000152757_5end | |||
|description=CAGE_peak_5_at_Huwe1_5end | |||
|id=chrX:148235556..148235626,+ | |||
|ontology_enrichment_celltype=CL:0000540!4.10e-09!33;CL:0000047!4.10e-09!33;CL:0000031!4.10e-09!33;CL:0000404!4.10e-09!33;CL:0000117!2.47e-07!23;CL:0000337!2.47e-07!23;CL:0000393!7.76e-07!39;CL:0000211!7.76e-07!39 | |||
|ontology_enrichment_celltype_v019_2=CL:0000540,3.35e-09,33;CL:0000047,3.35e-09,33;CL:0000031,3.35e-09,33;CL:0000404,3.35e-09,33;CL:0000117,2.11e-07,23;CL:0000337,2.11e-07,23;CL:0000393,7.15e-07,39;CL:0000211,7.15e-07,39 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000033!3.86e-16!63;UBERON:0004121!1.00e-15!102;UBERON:0000924!1.00e-15!102;UBERON:0006601!1.00e-15!102;UBERON:0001017!2.86e-15!73;UBERON:0005743!2.86e-15!73;UBERON:0002346!5.47e-15!71;UBERON:0003075!5.47e-15!71;UBERON:0007284!5.47e-15!71;UBERON:0000073!3.81e-14!75;UBERON:0001016!3.81e-14!75;UBERON:0003056!3.49e-13!49;UBERON:0000955!5.57e-13!50;UBERON:0006238!5.57e-13!50;UBERON:0001049!1.33e-12!52;UBERON:0005068!1.33e-12!52;UBERON:0006241!1.33e-12!52;UBERON:0007135!1.33e-12!52;UBERON:0002616!2.03e-12!49;UBERON:0003080!1.92e-10!40;UBERON:0000153!3.16e-10!94;UBERON:0002780!5.99e-10!39;UBERON:0001890!5.99e-10!39;UBERON:0006240!5.99e-10!39;UBERON:0007811!7.19e-09!86;UBERON:0002020!3.09e-08!34;UBERON:0002791!8.18e-07!29;UBERON:0003528!8.18e-07!29;UBERON:0001893!8.18e-07!29 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0010371,3.31e-16,73;UBERON:0002346,3.58e-16,64;UBERON:0003075,3.58e-16,64;UBERON:0007284,3.58e-16,64;UBERON:0004121,6.93e-16,95;UBERON:0000924,6.93e-16,95;UBERON:0006601,6.93e-16,95;UBERON:0001017,3.50e-15,73;UBERON:0000073,4.39e-14,54;UBERON:0001016,5.86e-14,75;UBERON:0003056,2.55e-13,49;UBERON:0001049,1.16e-12,52;UBERON:0005068,1.16e-12,52;UBERON:0006241,1.16e-12,52;UBERON:0007135,1.16e-12,52;UBERON:0000955,6.62e-12,47;UBERON:0006238,6.62e-12,47;UBERON:0010314,7.72e-12,92;UBERON:0002616,2.37e-11,46;UBERON:0003080,1.51e-10,40;UBERON:0002780,4.79e-10,39;UBERON:0001890,4.79e-10,39;UBERON:0006240,4.79e-10,39;UBERON:0002020,2.58e-08,34;UBERON:0003528,7.10e-07,29;UBERON:0002791,7.10e-07,29;UBERON:0001893,7.10e-07,29 | |||
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| |||
|short_description=p5@Huwe1 | |||
}} |
Revision as of 19:29, 14 September 2013
Short description: | p5@Huwe1 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_5_at_Huwe1_5end |
Coexpression cluster: | MCL_coexpression_mm9:321 |
Association with transcript: | -230bp_to_ENSMUST00000152757_5end |
EntrezGene: | Huwe1 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
neuron | 3.35e-09 | 33 |
neuronal stem cell | 3.35e-09 | 33 |
neuroblast | 3.35e-09 | 33 |
electrically signaling cell | 3.35e-09 | 33 |
CNS neuron (sensu Vertebrata) | 2.11e-07 | 23 |
neuroblast (sensu Vertebrata) | 2.11e-07 | 23 |
electrically responsive cell | 7.15e-07 | 39 |
electrically active cell | 7.15e-07 | 39 |
Ontology term | p-value | n |
---|---|---|
ecto-epithelium | 3.31e-16 | 73 |
neurectoderm | 3.58e-16 | 64 |
neural plate | 3.58e-16 | 64 |
presumptive neural plate | 3.58e-16 | 64 |
ectoderm-derived structure | 6.93e-16 | 95 |
ectoderm | 6.93e-16 | 95 |
presumptive ectoderm | 6.93e-16 | 95 |
central nervous system | 3.50e-15 | 73 |
regional part of nervous system | 4.39e-14 | 54 |
nervous system | 5.86e-14 | 75 |
pre-chordal neural plate | 2.55e-13 | 49 |
neural tube | 1.16e-12 | 52 |
neural rod | 1.16e-12 | 52 |
future spinal cord | 1.16e-12 | 52 |
neural keel | 1.16e-12 | 52 |
brain | 6.62e-12 | 47 |
future brain | 6.62e-12 | 47 |
structure with developmental contribution from neural crest | 7.72e-12 | 92 |
regional part of brain | 2.37e-11 | 46 |
anterior neural tube | 1.51e-10 | 40 |
regional part of forebrain | 4.79e-10 | 39 |
forebrain | 4.79e-10 | 39 |
future forebrain | 4.79e-10 | 39 |
gray matter | 2.58e-08 | 34 |
brain grey matter | 7.10e-07 | 29 |
regional part of telencephalon | 7.10e-07 | 29 |
telencephalon | 7.10e-07 | 29 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.