FFCP PHASE1:Mm9::chrX:154137001..154137008,+: Difference between revisions
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{{FFCP | {{FFCP|EntrezGene=66106|HGNC=|MCL_coexpression_id=19|UniProt=Q9DC77|association_with_transcript=-41bp_to_uc009usd.1_5end|description=CAGE_peak_6_at_Smpx_5end|id=chrX:154137001..154137008,+|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019_2=|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0007100!3.14e-14!18;UBERON:0000948!3.14e-14!18;UBERON:0005498!3.14e-14!18;UBERON:0004140!3.14e-14!18;UBERON:0009881!3.14e-14!18;UBERON:0004141!3.14e-14!18;UBERON:0003084!3.14e-14!18;UBERON:0007005!3.14e-14!18;UBERON:0004139!3.14e-14!18;UBERON:0004291!3.14e-14!18;UBERON:0004535!1.59e-09!23;UBERON:0001009!1.59e-09!23;UBERON:0000991!8.80e-08!18;UBERON:0005564!8.80e-08!18;UBERON:0000473!1.29e-07!14;UBERON:0004176!3.30e-07!17;UBERON:0009196!3.30e-07!17;UBERON:0009117!3.30e-07!17;UBERON:0003101!4.80e-07!16;UBERON:0000079!4.80e-07!16;UBERON:0004872!5.87e-07!33;UBERON:0003135!8.05e-07!15|ontology_enrichment_uberon_v019_2=UBERON:0007100,7.65e-27,18;UBERON:0000948,7.65e-27,18;UBERON:0005498,7.65e-27,18;UBERON:0004140,7.65e-27,18;UBERON:0009881,7.65e-27,18;UBERON:0004141,7.65e-27,18;UBERON:0003084,7.65e-27,18;UBERON:0007005,7.65e-27,18;UBERON:0004139,7.65e-27,18;UBERON:0004291,7.65e-27,18;UBERON:0004535,5.16e-20,23;UBERON:0001009,5.16e-20,23;UBERON:0000473,1.58e-13,14;UBERON:0004872,1.33e-12,33;UBERON:0003135,1.84e-12,15;UBERON:0001048,6.46e-12,134;UBERON:0000991,7.61e-12,18;UBERON:0005564,7.61e-12,18;UBERON:0003101,1.57e-11,16;UBERON:0000079,1.57e-11,16;UBERON:0003103,1.81e-11,43;UBERON:0000926,9.83e-11,120;UBERON:0004120,9.83e-11,120;UBERON:0006603,9.83e-11,120;UBERON:0004176,1.04e-10,17;UBERON:0009196,1.04e-10,17;UBERON:0009117,1.04e-10,17;UBERON:0003133,3.22e-08,24;UBERON:0003914,1.32e-07,47;UBERON:0005156,2.17e-07,26;UBERON:0000990,2.17e-07,26|phase1_expression=8.64803774365887,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.595303031057488,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.286533439938757,3.09403255366465,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.127687338085188,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.82577746171277,0,0,0,6.05626705039726,0,0,0,0,0,0,0.11418387971906,0,0.29688427812965,0.173485326766136,0,0.691846491768175,0,0.470354828542819,0,0,0,0.884610551949874,0.647067399789637,3.09178125844551,1.45462575940567,1.86391761218122,0,0,0,0,0,0,0.149790639404823,0,0,0,0,0.41557608911912,0,0,0.497627882440372,0,0.420883711772948,0.130120442962704,0,0,0.452114453507145,0.136072998302656,0.12811372028485,0.187403449119458,1.03481348295606,0,0,0,0,0.278047249225598,1.0447564995665,0.61734640922383,1.19420560091096,0,0,0,9.94203708170409,9.85009451920604,10.9837857491219,8.04932100989715,10.6252685143598,11.415766353666,9.06882384526591,9.92611585178591,8.05680862333469,4.93679549740441,2.79084688934462,3.97237166774693,6.43279944671462,6.14740322814942,4.69722465661301,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.19496408711912,0,0.432276099749388,0,0,0,0,0.407302655690628,0.193952487167626,0,0.0632365371242573,0.147610147979602,0,0,0,0.166845105716094,0.196558995113203,0,0,0,0,0,0,0,0,0.372140947668503,0,0,0.179397413521912,0,0,1.13694847062291,0.814824882210129,1.35796068620151,1.40814148973101,0.670025029767263,0.238043640886014,0,0,0,0,0,0.172684981865896,0.144649058581512,0,0,0,0,0.160550589987792,0.117211686592203,0,5.55436039849621,0,0,0,0,0,0,0,0,0,0,0,0.35613120733451,0.162886959353576,0,0,0.242780636154981,0,0.188605079755898,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.220528398054962,0.49465875882444,0.484393280087717,0.180938774784468,0.119372344003136,0.164140899745061,0,0.18542530201051,0,0.82554747185289,0.740778109478847,0,0,0,0,0,0,0,0,0.203319467126849,0.108005340821801,0.418176592028937,0,0.404593039154462,0.0826534557253359,0,0.129614973291793,0,3.38215763210514,1.94371509857172,2.15096037594227,0,1.54991788173277,1.85851738039856,1.76035857968631,1.43224823328345,4.40409246587986,3.8653459332161,2.01621004380506,0,0,0,0.25984164595559,0,0.596044064343795,0,0,0,0,0,0,0,0,14.0572837841431,0,0,0,0,0,0,0,2.50786052017682,0,0,0,0,0,0,0,0,0,0,0,0,0.170733605754134,0.972426868273176,0,0.183843508450014,0.44449345560323,1.03017528619447,0.64183841918363,0.505394423527595,1.2673964994512,0.565879024158229,1.03005658216871,0.640251524048693,0.918967503289812,0.476293691283074,0.927074607558844,0.192909220463705,0,0.735994600671987,1.02860775715625,1.06485483695602,1.66905332963125,0.872078499793971,0.658765662907314,0.676916863133412,0.73171189149109,0.789209134313529,0.543216455383447,0.561142271657738,0.474540072496697,0.197008964751127,0,0.619747364743864,0.385813221962283,0,0.701794825336225,0.429742108096597,2.29545998482612,1.98532277207564,3.94175320554716|short_description=p6@Smpx}} | ||
|EntrezGene=66106 | |||
|HGNC= | |||
|MCL_coexpression_id=19 | |||
|UniProt=Q9DC77 | |||
|association_with_transcript=-41bp_to_uc009usd.1_5end | |||
|description=CAGE_peak_6_at_Smpx_5end | |||
|id=chrX:154137001..154137008,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007100!3.14e-14!18;UBERON:0000948!3.14e-14!18;UBERON:0005498!3.14e-14!18;UBERON:0004140!3.14e-14!18;UBERON:0009881!3.14e-14!18;UBERON:0004141!3.14e-14!18;UBERON:0003084!3.14e-14!18;UBERON:0007005!3.14e-14!18;UBERON:0004139!3.14e-14!18;UBERON:0004291!3.14e-14!18;UBERON:0004535!1.59e-09!23;UBERON:0001009!1.59e-09!23;UBERON:0000991!8.80e-08!18;UBERON:0005564!8.80e-08!18;UBERON:0000473!1.29e-07!14;UBERON:0004176!3.30e-07!17;UBERON:0009196!3.30e-07!17;UBERON:0009117!3.30e-07!17;UBERON:0003101!4.80e-07!16;UBERON:0000079!4.80e-07!16;UBERON:0004872!5.87e-07!33;UBERON:0003135!8.05e-07!15 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0007100,7.65e-27,18;UBERON:0000948,7.65e-27,18;UBERON:0005498,7.65e-27,18;UBERON:0004140,7.65e-27,18;UBERON:0009881,7.65e-27,18;UBERON:0004141,7.65e-27,18;UBERON:0003084,7.65e-27,18;UBERON:0007005,7.65e-27,18;UBERON:0004139,7.65e-27,18;UBERON:0004291,7.65e-27,18;UBERON:0004535,5.16e-20,23;UBERON:0001009,5.16e-20,23;UBERON:0000473,1.58e-13,14;UBERON:0004872,1.33e-12,33;UBERON:0003135,1.84e-12,15;UBERON:0001048,6.46e-12,134;UBERON:0000991,7.61e-12,18;UBERON:0005564,7.61e-12,18;UBERON:0003101,1.57e-11,16;UBERON:0000079,1.57e-11,16;UBERON:0003103,1.81e-11,43;UBERON:0000926,9.83e-11,120;UBERON:0004120,9.83e-11,120;UBERON:0006603,9.83e-11,120;UBERON:0004176,1.04e-10,17;UBERON:0009196,1.04e-10,17;UBERON:0009117,1.04e-10,17;UBERON:0003133,3.22e-08,24;UBERON:0003914,1.32e-07,47;UBERON:0005156,2.17e-07,26;UBERON:0000990,2.17e-07,26 | |||
|phase1_expression=8.64803774365887,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.595303031057488,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.286533439938757,3.09403255366465,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.127687338085188,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.82577746171277,0,0,0,6.05626705039726,0,0,0,0,0,0,0.11418387971906,0,0.29688427812965,0.173485326766136,0,0.691846491768175,0,0.470354828542819,0,0,0,0.884610551949874,0.647067399789637,3.09178125844551,1.45462575940567,1.86391761218122,0,0,0,0,0,0,0.149790639404823,0,0,0,0,0.41557608911912,0,0,0.497627882440372,0,0.420883711772948,0.130120442962704,0,0,0.452114453507145,0.136072998302656,0.12811372028485,0.187403449119458,1.03481348295606,0,0,0,0,0.278047249225598,1.0447564995665,0.61734640922383,1.19420560091096,0,0,0,9.94203708170409,9.85009451920604,10.9837857491219,8.04932100989715,10.6252685143598,11.415766353666,9.06882384526591,9.92611585178591,8.05680862333469,4.93679549740441,2.79084688934462,3.97237166774693,6.43279944671462,6.14740322814942,4.69722465661301,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.19496408711912,0,0.432276099749388,0,0,0,0,0.407302655690628,0.193952487167626,0,0.0632365371242573,0.147610147979602,0,0,0,0.166845105716094,0.196558995113203,0,0,0,0,0,0,0,0,0.372140947668503,0,0,0.179397413521912,0,0,1.13694847062291,0.814824882210129,1.35796068620151,1.40814148973101,0.670025029767263,0.238043640886014,0,0,0,0,0,0.172684981865896,0.144649058581512,0,0,0,0,0.160550589987792,0.117211686592203,0,5.55436039849621,0,0,0,0,0,0,0,0,0,0,0,0.35613120733451,0.162886959353576,0,0,0.242780636154981,0,0.188605079755898,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.220528398054962,0.49465875882444,0.484393280087717,0.180938774784468,0.119372344003136,0.164140899745061,0,0.18542530201051,0,0.82554747185289,0.740778109478847,0,0,0,0,0,0,0,0,0.203319467126849,0.108005340821801,0.418176592028937,0,0.404593039154462,0.0826534557253359,0,0.129614973291793,0,3.38215763210514,1.94371509857172,2.15096037594227,0,1.54991788173277,1.85851738039856,1.76035857968631,1.43224823328345,4.40409246587986,3.8653459332161,2.01621004380506,0,0,0,0.25984164595559,0,0.596044064343795,0,0,0,0,0,0,0,0,14.0572837841431,0,0,0,0,0,0,0,2.50786052017682,0,0,0,0,0,0,0,0,0,0,0,0,0.170733605754134,0.972426868273176,0,0.183843508450014,0.44449345560323,1.03017528619447,0.64183841918363,0.505394423527595,1.2673964994512,0.565879024158229,1.03005658216871,0.640251524048693,0.918967503289812,0.476293691283074,0.927074607558844,0.192909220463705,0,0.735994600671987,1.02860775715625,1.06485483695602,1.66905332963125,0.872078499793971,0.658765662907314,0.676916863133412,0.73171189149109,0.789209134313529,0.543216455383447,0.561142271657738,0.474540072496697,0.197008964751127,0,0.619747364743864,0.385813221962283,0,0.701794825336225,0.429742108096597,2.29545998482612,1.98532277207564,3.94175320554716 | |||
|short_description=p6@Smpx | |||
}} |
Revision as of 19:32, 14 September 2013
Short description: | p6@Smpx |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_6_at_Smpx_5end |
Coexpression cluster: | MCL_coexpression_mm9:19 |
Association with transcript: | -41bp_to_uc009usd.1_5end |
EntrezGene: | Smpx |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
primary circulatory organ | 7.65e-27 | 18 |
heart | 7.65e-27 | 18 |
primitive heart tube | 7.65e-27 | 18 |
primary heart field | 7.65e-27 | 18 |
anterior lateral plate mesoderm | 7.65e-27 | 18 |
heart tube | 7.65e-27 | 18 |
heart primordium | 7.65e-27 | 18 |
cardiac mesoderm | 7.65e-27 | 18 |
cardiogenic plate | 7.65e-27 | 18 |
heart rudiment | 7.65e-27 | 18 |
cardiovascular system | 5.16e-20 | 23 |
circulatory system | 5.16e-20 | 23 |
testis | 1.58e-13 | 14 |
splanchnic layer of lateral plate mesoderm | 1.33e-12 | 33 |
male reproductive organ | 1.84e-12 | 15 |
primordium | 6.46e-12 | 134 |
gonad | 7.61e-12 | 18 |
gonad primordium | 7.61e-12 | 18 |
male organism | 1.57e-11 | 16 |
male reproductive system | 1.57e-11 | 16 |
compound organ | 1.81e-11 | 43 |
mesoderm | 9.83e-11 | 120 |
mesoderm-derived structure | 9.83e-11 | 120 |
presumptive mesoderm | 9.83e-11 | 120 |
external genitalia | 1.04e-10 | 17 |
indifferent external genitalia | 1.04e-10 | 17 |
indifferent gonad | 1.04e-10 | 17 |
reproductive organ | 3.22e-08 | 24 |
epithelial tube | 1.32e-07 | 47 |
reproductive structure | 2.17e-07 | 26 |
reproductive system | 2.17e-07 | 26 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.