Personal tools

FFCP PHASE1:Mm9::chrX:35807985..35807987,-: Difference between revisions

From FANTOM5_SSTAR

Jump to: navigation, search
No edit summary
No edit summary
Line 1: Line 1:
{{FFCP
{{FFCP|EntrezGene=NA|HGNC=|MCL_coexpression_id=6|UniProt=NA|association_with_transcript=NA|description=CAGE_peak_at_chrX:35807985..35807987,-|id=chrX:35807985..35807987,-|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019_2=CL:0000355,2.75e-09,9|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=DOID:0060100,3.73e-11,3;DOID:4045,3.73e-11,3|ontology_enrichment_uberon=|ontology_enrichment_uberon_v019_2=UBERON:0000383,1.73e-11,10;UBERON:0001134,2.75e-09,9;UBERON:0002036,2.75e-09,9;UBERON:0002385,2.75e-09,9;UBERON:0000486,2.75e-09,9;UBERON:0007503,2.75e-09,9;UBERON:0001015,2.75e-09,9;UBERON:0002329,2.75e-09,9;UBERON:0003082,2.75e-09,9;UBERON:0003059,2.75e-09,9;UBERON:0007282,2.75e-09,9;UBERON:0004290,2.75e-09,9;UBERON:0009618,2.75e-09,9;UBERON:0005256,8.91e-09,45;UBERON:0007524,1.51e-07,11;UBERON:0003077,1.51e-07,11;UBERON:0007285,1.51e-07,11;UBERON:0002100,1.54e-07,90;UBERON:0003104,5.10e-07,61;UBERON:0009142,5.10e-07,61;UBERON:0002107,6.54e-07,22;UBERON:0007499,6.54e-07,22;UBERON:0006925,6.54e-07,22;UBERON:0009497,6.54e-07,22;UBERON:0000015,6.54e-07,22;UBERON:0002423,6.54e-07,22;UBERON:0006235,6.54e-07,22;UBERON:0008835,6.54e-07,22;UBERON:0003894,6.54e-07,22;UBERON:0004161,6.54e-07,22;UBERON:0008836,6.54e-07,22|phase1_expression=0.80074423552397,0.697950815278722,0.454999239389536,0,0,0.16787927191189,0.467225281191051,0.129123323441576,0.422366166455,0.468129052643987,0,0.0797721589953364,0.171200729931206,0,0.333109761815663,0.202475267389826,0,0.157731082679119,0.274228867211478,0.84877930359606,0.340173160604279,0.198581902401771,0,0,0,0,0,0.430942465371778,0.570070258369122,0.252030129759931,0.221730510655305,0,0,0,0.288851619751275,0,0.204169356262369,2.09265815368454,3.906676722619,1.0470474879476,8.2352408324342,6.83045484958446,0.971020706062307,0.629484089877886,0.304130793658544,1.28482726513177,0,0,0,0,0.139986421625363,0,0.167782606057736,0.725362142011344,0,0.257259436035947,0.85960031981627,1.03134418455488,0,0,0,0,0,0,0,0,0,0,0.103689612308478,0.135005938331691,0,0,0,0.122490799214954,0.191690942036473,0,0,0,0.153606533256243,0,0.0914876436024097,0,0,0.56276261003168,0.30559649555362,0,0.569486723196412,0.186399445825301,0.075726193333184,0.226714680320357,1.44932244350839,0,0.679971333707751,1.61910957491345,0,0,0,0.170430322578058,0.259786004602869,0,0.704217098883403,0,0,0,0.649473123033642,0.760079596425296,0,1.02765491747154,0,0.29688427812965,0.173485326766136,0,0.461230994512117,0.452167921657868,0.470354828542819,0.376999773989026,0.741584903203122,0.144599356919912,0,0.161766849947409,0,0,0,0,0.209446706813455,0.766371165625774,0.838705871541442,0,1.14363204365758,0.149790639404823,0.457500602818626,0,0.173824320192276,0,0.20778804455956,0,0.81471491080253,0.124406970610093,0.252722758433675,0,0.390361328888111,0.229902104433473,0.180062129805349,0.452114453507145,0.408218994907967,0.896796041993948,0.374806898238915,0.258703370739016,0,0.189106080167819,0,0,0.278047249225598,0,0.411564272815887,0.59710280045548,0.702213187313235,0.257347907114715,0.852490498186778,0,0.234526059981096,0.180062061461015,0.23674473558521,0.590292695242212,0.617068451549513,0.465067889500816,0.536546802799238,0.467061369468678,0.493679549740441,0.164167464079095,0.243206428637567,0.730999937126662,0,0.402619256281115,0,0.205809224758569,0,0.528901133327089,0.213288250535234,0,0,0,0.22237804384487,0.190225626112559,0,0.988193728344065,1.25667604400135,0.596869416123452,0.779856348476481,0.898819408654221,1.08069024937347,0.398282546508734,0,0.456994050438915,1.1270773567308,0.407302655690628,0.581857461502877,0.350679099451593,0.252946148497029,0.147610147979602,0.941992367048249,0.616985819609003,0.592905254174298,0.166845105716094,0.196558995113203,0,0.202860121388503,0.482354319504834,0.50925170356284,0,0.972811360650212,1.64736847912849,2.87536413054709,0.372140947668503,0.624075346229121,1.01031551178845,1.4351793081753,1.92977408545347,0,0.37898282354097,0,1.35796068620151,0.938760993154008,0.167506257441816,0.238043640886014,0.195133647857799,0,0.8858587585951,0.318909537314974,0.327726629431476,1.03610989119537,0.433947175744535,0,0.54390568381871,0,0,0.160550589987792,0.468846746368813,0.163934945376675,1.00988370881749,0,0,0.215423397732799,0,0,0.283076530788832,0.404810701674894,0,0,0,0,0.35613120733451,0.81443479676788,0.494910368917606,0,0,0.604647113929502,0.377210159511796,0,0.307435147943927,0,1.09060118843252,0,0.316036757935816,1.05418608574999,0,0.340439605753788,0.540183282093931,0.129358683782755,0.643011105094777,0,0.356737635204141,0.164549020602121,0.304464949114599,0.469343416127421,0.21183207086382,0,0.32977250588296,0.322928853391811,0.301564624640779,0.596861720015682,0.820704498725306,0.291480836629851,0,0.170870880797853,0.206386867963223,0,0,0.410082683163076,0.228778173206523,0.339956859987711,0.69975726161829,0.552799895217695,0,0.158167996790568,0.406638934253697,0.216010681643603,1.04544148007234,0,0.539457385539283,0,0.523511883968059,0.259229946583586,0.621339313086926,0,0.747582730219894,0.496375471371293,0,0.645799117388655,0.506868376472335,0.469428954583016,0.13020438484395,0.314578033277133,0.483168241652012,0.864090018773596,0,0.202725215290164,0.513554785824136,1.03936658382236,0,0.198681354781265,0.240390899039938,0,0.302899349844443,0.457240839929999,0.302478555410522,0.292373642219257,0.0962118416403295,0.467507608726276,1.13365191807606,0.221985953374065,0,0,0,0,0,0.857473516316263,0.501572104035363,0,0.460325236507177,0,0.68741272937475,0.685082519770642,0,0,0,0,0,0.207574695168353,0,0.512200817262403,0,0.209613162627982,0,0.222246727801615,0,0,0.252697211763798,0,0,0.280924522409647,0.320125762024346,0.17230640686684,0,0.115884325944855,0.77163688185482,0.412085900803307,0.147198920134397,0.342869252385415,0.354951612318675,0,0,0.0941093804153306,0.338458431566706,0.182927972872773,0.526139422875686,0.543216455383447,0,0.118635018124174,0.492522411877817,0.409231043169689,0.619747364743864,0.385813221962283,0,0.233931608445408,0,0.382576664137687,0.441182838239031,0.231867835620421|short_description=p@chrX:35807985..35807987,-}}
|EntrezGene=NA
|HGNC=
|MCL_coexpression_id=6
|UniProt=NA
|association_with_transcript=NA
|description=CAGE_peak_at_chrX:35807985..35807987,-
|id=chrX:35807985..35807987,-
|ontology_enrichment_celltype=
|ontology_enrichment_celltype_v019_2=CL:0000355,2.75e-09,9
|ontology_enrichment_disease=
|ontology_enrichment_disease_v019_2=DOID:0060100,3.73e-11,3;DOID:4045,3.73e-11,3
|ontology_enrichment_uberon=
|ontology_enrichment_uberon_v019_2=UBERON:0000383,1.73e-11,10;UBERON:0001134,2.75e-09,9;UBERON:0002036,2.75e-09,9;UBERON:0002385,2.75e-09,9;UBERON:0000486,2.75e-09,9;UBERON:0007503,2.75e-09,9;UBERON:0001015,2.75e-09,9;UBERON:0002329,2.75e-09,9;UBERON:0003082,2.75e-09,9;UBERON:0003059,2.75e-09,9;UBERON:0007282,2.75e-09,9;UBERON:0004290,2.75e-09,9;UBERON:0009618,2.75e-09,9;UBERON:0005256,8.91e-09,45;UBERON:0007524,1.51e-07,11;UBERON:0003077,1.51e-07,11;UBERON:0007285,1.51e-07,11;UBERON:0002100,1.54e-07,90;UBERON:0003104,5.10e-07,61;UBERON:0009142,5.10e-07,61;UBERON:0002107,6.54e-07,22;UBERON:0007499,6.54e-07,22;UBERON:0006925,6.54e-07,22;UBERON:0009497,6.54e-07,22;UBERON:0000015,6.54e-07,22;UBERON:0002423,6.54e-07,22;UBERON:0006235,6.54e-07,22;UBERON:0008835,6.54e-07,22;UBERON:0003894,6.54e-07,22;UBERON:0004161,6.54e-07,22;UBERON:0008836,6.54e-07,22
|phase1_expression=0.80074423552397,0.697950815278722,0.454999239389536,0,0,0.16787927191189,0.467225281191051,0.129123323441576,0.422366166455,0.468129052643987,0,0.0797721589953364,0.171200729931206,0,0.333109761815663,0.202475267389826,0,0.157731082679119,0.274228867211478,0.84877930359606,0.340173160604279,0.198581902401771,0,0,0,0,0,0.430942465371778,0.570070258369122,0.252030129759931,0.221730510655305,0,0,0,0.288851619751275,0,0.204169356262369,2.09265815368454,3.906676722619,1.0470474879476,8.2352408324342,6.83045484958446,0.971020706062307,0.629484089877886,0.304130793658544,1.28482726513177,0,0,0,0,0.139986421625363,0,0.167782606057736,0.725362142011344,0,0.257259436035947,0.85960031981627,1.03134418455488,0,0,0,0,0,0,0,0,0,0,0.103689612308478,0.135005938331691,0,0,0,0.122490799214954,0.191690942036473,0,0,0,0.153606533256243,0,0.0914876436024097,0,0,0.56276261003168,0.30559649555362,0,0.569486723196412,0.186399445825301,0.075726193333184,0.226714680320357,1.44932244350839,0,0.679971333707751,1.61910957491345,0,0,0,0.170430322578058,0.259786004602869,0,0.704217098883403,0,0,0,0.649473123033642,0.760079596425296,0,1.02765491747154,0,0.29688427812965,0.173485326766136,0,0.461230994512117,0.452167921657868,0.470354828542819,0.376999773989026,0.741584903203122,0.144599356919912,0,0.161766849947409,0,0,0,0,0.209446706813455,0.766371165625774,0.838705871541442,0,1.14363204365758,0.149790639404823,0.457500602818626,0,0.173824320192276,0,0.20778804455956,0,0.81471491080253,0.124406970610093,0.252722758433675,0,0.390361328888111,0.229902104433473,0.180062129805349,0.452114453507145,0.408218994907967,0.896796041993948,0.374806898238915,0.258703370739016,0,0.189106080167819,0,0,0.278047249225598,0,0.411564272815887,0.59710280045548,0.702213187313235,0.257347907114715,0.852490498186778,0,0.234526059981096,0.180062061461015,0.23674473558521,0.590292695242212,0.617068451549513,0.465067889500816,0.536546802799238,0.467061369468678,0.493679549740441,0.164167464079095,0.243206428637567,0.730999937126662,0,0.402619256281115,0,0.205809224758569,0,0.528901133327089,0.213288250535234,0,0,0,0.22237804384487,0.190225626112559,0,0.988193728344065,1.25667604400135,0.596869416123452,0.779856348476481,0.898819408654221,1.08069024937347,0.398282546508734,0,0.456994050438915,1.1270773567308,0.407302655690628,0.581857461502877,0.350679099451593,0.252946148497029,0.147610147979602,0.941992367048249,0.616985819609003,0.592905254174298,0.166845105716094,0.196558995113203,0,0.202860121388503,0.482354319504834,0.50925170356284,0,0.972811360650212,1.64736847912849,2.87536413054709,0.372140947668503,0.624075346229121,1.01031551178845,1.4351793081753,1.92977408545347,0,0.37898282354097,0,1.35796068620151,0.938760993154008,0.167506257441816,0.238043640886014,0.195133647857799,0,0.8858587585951,0.318909537314974,0.327726629431476,1.03610989119537,0.433947175744535,0,0.54390568381871,0,0,0.160550589987792,0.468846746368813,0.163934945376675,1.00988370881749,0,0,0.215423397732799,0,0,0.283076530788832,0.404810701674894,0,0,0,0,0.35613120733451,0.81443479676788,0.494910368917606,0,0,0.604647113929502,0.377210159511796,0,0.307435147943927,0,1.09060118843252,0,0.316036757935816,1.05418608574999,0,0.340439605753788,0.540183282093931,0.129358683782755,0.643011105094777,0,0.356737635204141,0.164549020602121,0.304464949114599,0.469343416127421,0.21183207086382,0,0.32977250588296,0.322928853391811,0.301564624640779,0.596861720015682,0.820704498725306,0.291480836629851,0,0.170870880797853,0.206386867963223,0,0,0.410082683163076,0.228778173206523,0.339956859987711,0.69975726161829,0.552799895217695,0,0.158167996790568,0.406638934253697,0.216010681643603,1.04544148007234,0,0.539457385539283,0,0.523511883968059,0.259229946583586,0.621339313086926,0,0.747582730219894,0.496375471371293,0,0.645799117388655,0.506868376472335,0.469428954583016,0.13020438484395,0.314578033277133,0.483168241652012,0.864090018773596,0,0.202725215290164,0.513554785824136,1.03936658382236,0,0.198681354781265,0.240390899039938,0,0.302899349844443,0.457240839929999,0.302478555410522,0.292373642219257,0.0962118416403295,0.467507608726276,1.13365191807606,0.221985953374065,0,0,0,0,0,0.857473516316263,0.501572104035363,0,0.460325236507177,0,0.68741272937475,0.685082519770642,0,0,0,0,0,0.207574695168353,0,0.512200817262403,0,0.209613162627982,0,0.222246727801615,0,0,0.252697211763798,0,0,0.280924522409647,0.320125762024346,0.17230640686684,0,0.115884325944855,0.77163688185482,0.412085900803307,0.147198920134397,0.342869252385415,0.354951612318675,0,0,0.0941093804153306,0.338458431566706,0.182927972872773,0.526139422875686,0.543216455383447,0,0.118635018124174,0.492522411877817,0.409231043169689,0.619747364743864,0.385813221962283,0,0.233931608445408,0,0.382576664137687,0.441182838239031,0.231867835620421
|short_description=p@chrX:35807985..35807987,-
}}

Revision as of 19:47, 14 September 2013

Short description:p@chrX:35807985..35807987, -
Species:Mouse (Mus musculus)
DPI dataset: NA
TSS-like-by-RIKEN-classifier(Yes/No): NA
DHS support(Yes/No): NA
Description: CAGE_peak_at_chrX:35807985..35807987, -
Coexpression cluster:MCL_coexpression_mm9:6
Association with transcript: NA
EntrezGene:NA
Link to Zenbu:ZENBU


View on UCSC genome browser

Mouse over to see Genome browser image, Click image to go to Genome browser


CAGE Expression

Sample

p@chrX:35807985..35807987-

Atoh1+ Inner ear hair cells - organ of corti, pool1.CNhs12533.12158-128G70.80
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13242.11850-124I50.70
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13233.11851-124I60.45
CD326+ enterocyte, pool1.CNhs13542.11848-124I30.00
CD326+ enterocyte, pool2.CNhs13197.11849-124I40.00
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13236.11852-124I70.17
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13210.11853-124I80.47
CD4+CD25+ regulatory T cells, pool2 (Balb_cAJcl).CNhs13221.11818-124E90.13
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool1 (C57BL_6J).CNhs13219.11816-124E70.42
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool2 (Balb_cAJcl).CNhs13226.11820-124F20.47
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool1 (C57BL_6J).CNhs13218.11815-124E60.00
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool2 (Balb_cAJcl).CNhs13225.11819-124F10.08
CD4+CD25-CD44- naive conventional T cells, pool1 (C57BL_6J).CNhs13217.11813-124E40.17
CD4+CD25-CD44- naive conventional T cells, pool2 (Balb_cAJcl).CNhs13220.11817-124E80.00
CD41+ megakaryocyte cancer, donor1.CNhs13079.11774-124A10.33
CD41+ megakaryocyte cancer, donor2.CNhs13213.11776-124A30.20
CD41+ megakaryocyte cancer, donor3.CNhs13506.11778-124A50.00
CD41+ megakaryocyte control, donor1.CNhs13212.11775-124A20.16
CD41+ megakaryocyte control, donor2.CNhs13214.11777-124A40.27
CD41+ megakaryocyte control, donor3.CNhs13201.11779-124A60.85
Clontech Mouse Universal Reference Total RNA, pool1.CNhs10609.10001-101A30.34
EBF KO HPCs induced to T cell, 00hr00min, biol_rep1.CNhs11058.12972-138H20.20
EBF KO HPCs induced to T cell, 00hr00min, biol_rep2.CNhs12980.12988-138I90.00
Follicle Associated Epithelium, pool2.CNhs13211.10262-104D10.00
Follicle Associated Epithelium, pool3.CNhs13200.10263-104D20.00
GP2+ M cell, pool1.CNhs13228.11845-124H90.00
GP2+ M cell, pool2.CNhs13231.11846-124I10.00
GP2+ M cell, pool3.CNhs13240.11847-124I20.43
Ileum epithelium, pool1.CNhs13199.10252-104B90.57
Ileum epithelium, pool2.CNhs13232.10253-104C10.25
Ileum epithelium, treated with RANKL, day03, pool3.CNhs13234.10260-104C80.22
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep1.CNhs12449.13063-139I30.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep2.CNhs12668.13129-140G60.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep3.CNhs12770.13195-141E90.00
Lgr5 positive intestinal stem cells, pool1.CNhs12555.12228-129F50.29
Lgr5 positive intestinal stem cells, pool2.CNhs12556.12229-129F60.00
Lgr5 positive intestinal stem cells, pool3.CNhs12557.12230-129F70.20
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor1 (10,11,12 3LL).CNhs12539.12159-128G82.09
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor2 (0127 3LL).CNhs12198.12161-128H13.91
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor3 (0128 3LL).CNhs12542.12163-128H31.05
MC1+Gr1+ myeloid-derived suppressor cells control, donor1 (4,5,6PBS).CNhs12540.12160-128G98.24
MC1+Gr1+ myeloid-derived suppressor cells control, donor2 (0127 PBS).CNhs12541.12162-128H26.83
MC1+Gr1+ myeloid-derived suppressor cells control, donor3 (0128 PBS).CNhs12543.12164-128H40.97
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep1.CNhs11055.11484-119D80.63
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep2.CNhs11056.11485-119D90.30
Mouse Aortic Smooth Muscle cells, donor1.CNhs11297.11299-117B31.28
Mouse Astrocytes - cerebellar, donor1.CNhs13077.11708-123B70.00
Mouse Astrocytes - cerebellar, donor2.CNhs12076.11550-120C20.00
Mouse Astrocytes - hippocampus, donor1.CNhs12129.11709-123B80.00
Mouse Astrocytes - hippocampus, donor2.CNhs12077.11551-120C30.00
Mouse Astrocytes, donor2.CNhs12078.11552-120C40.14
Mouse Astrocytes, donor3.CNhs12107.11633-122C40.00
Mouse CD19+ B Cells, donor1.CNhs13531.11856-125A20.17
Mouse CD4+ T Cells, donor1.CNhs13509.11854-124I90.73
Mouse CD8+ T Cells, donor1.CNhs13511.11855-125A10.00
Mouse Cardiac Myocytes, donor1.CNhs12355.11711-123C10.26
Mouse Cardiac Myocytes, donor2.CNhs12356.11729-123E10.86
Mouse Cardiac Myocytes, donor3.CNhs12353.11634-122C51.03
Mouse Granule cells, donor1.CNhs12131.11713-123C30.00
Mouse Granule cells, donor2.CNhs12357.11731-123E30.00
Mouse Granule cells, donor3.CNhs12108.11636-122C70.00
Mouse Meningeal cells, donor1.CNhs12132.11716-123C60.00
Mouse Meningeal cells, donor3.CNhs12109.11639-122D10.00
Mouse Mesenchymal stem cells - bone marrow derived, donor1.CNhs12628.11717-123C70.00
Mouse Mesenchymal stem cells - bone marrow derived, donor2.CNhs12633.11735-123E70.00
Mouse Mesenchymal stem cells - bone marrow derived, donor3.CNhs12616.11640-122D20.00
Mouse Microglia, donor1.CNhs12629.11718-123C80.00
Mouse Microglia, donor2.CNhs12634.11736-123E80.00
Mouse Neurons - cortical, donor1.CNhs12025.11724-123D50.10
Mouse Neurons - cortical, donor2.CNhs11947.11742-123F50.14
Mouse Neurons - cortical, donor3.CNhs12112.11647-122D90.00
Mouse Neurons - dorsal spinal cord, donor2.CNhs12635.11738-123F10.00
Mouse Neurons - dorsal spinal cord, donor3.CNhs12618.11643-122D50.00
Mouse Neurons - hippocampal, donor1.CNhs12133.11721-123D20.12
Mouse Neurons - hippocampal, donor2.CNhs12359.11739-123F20.19
Mouse Neurons - hippocampal, donor3.CNhs12110.11644-122D60.00
Mouse Neurons - raphe, donor1.CNhs12631.11722-123D30.00
Mouse Neurons - raphe, donor2.CNhs12636.11740-123F30.00
Mouse Neurons - raphe, donor3.CNhs12619.11645-122D70.15
Mouse Neurons - striatal, donor1.CNhs12134.11723-123D40.00
Mouse Neurons - striatal, donor2.CNhs12360.11741-123F40.09
Mouse Neurons - striatal, donor3.CNhs12111.11646-122D80.00
Mouse Neurons - substantia nigra, donor4, tech_rep1.CNhs12612.11489-119E40.00
Mouse Neurons - substantia nigra, donor5.CNhs12614.11490-119E50.56
Mouse Neurons - substantia nigra, donor6.CNhs12643.11770-123I60.31
Mouse Neurons - ventral spinal cord, donor1.CNhs12632.11725-123D60.00
Mouse Neurons - ventral spinal cord, donor2.CNhs12638.11743-123F60.57
Mouse Neurons - ventral spinal cord, donor3.CNhs12113.11648-122E10.19
Mouse Schwann, donor1.CNhs12507.11728-123D90.08
Mouse Schwann, donor2.CNhs12573.11746-123F90.23
Mouse hepatic Sinusoidal Endothelial Cells, donor1.CNhs13209.11830-124G31.45
Mouse hepatic Stellate Cells (lipocyte), donor1.CNhs13196.11825-124F70.00
Mouse hepatocyte, donor1.CNhs13078.11714-123C40.68
Mouse hepatocyte, donor3.CNhs12615.11637-122C81.62
Mouse hepatocyte, donor6.CNhs13090.11822-124F40.00
Mouse hepatocyte, donor8.CNhs13091.11824-124F60.00
SABiosciences XpressRef Mouse Universal Total RNA, pool1.CNhs10611.10003-101A70.00
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep1 (000hC4).CNhs11939.12338-130I70.17
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep2 (000hC5).CNhs13275.12460-132E30.26
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep3 (000hC6).CNhs13324.12582-133I80.00
Sox2+ Supporting cells - organ of corti, pool1.CNhs12532.12157-128G60.70
TSt-4/DLL1 feeder cells, biol_rep1.CNhs13407.12971-138H10.00
TSt-4/DLL1 feeder cells, biol_rep2.CNhs13408.12987-138I80.00
TSt-4/DLL1 feeder cells, biol_rep3.CNhs13409.13003-139B60.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep1.CNhs13739.13367-143G10.65
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep2.CNhs13740.13368-143G20.76
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep3.CNhs13741.13369-143G30.00
Universal RNA - Mouse Normal Tissues Biochain, pool1.CNhs10613.10008-101B61.03
accessory axillary lymph node, adult.CNhs10475.1063-29H90.00
adrenal gland, adult.CNhs10508.49-24D70.30
adrenal gland, embryo E14.CNhs11038.406-44C50.17
adrenal gland, embryo E16.CNhs11004.1254-43D60.00
adrenal gland, embryo E17.CNhs11043.1263-45I10.46
adrenal gland, embryo E18.CNhs11026.1262-18F50.45
adrenal gland, neonate N00.CNhs11191.1311-23C10.47
adrenal gland, neonate N25.CNhs11223.1377-27I30.38
amnion, adult pregnant day17.5.CNhs10488.583-22A80.74
aorta, adult.CNhs10498.46-23H10.14
bone (os femoris), adult.CNhs10483.56-12G20.00
bone (os femoris), neonate N02.CNhs11227.1985-43F50.16
bone (os femoris), neonate N16.CNhs11225.1525-43A60.00
bone (os femoris), neonate N20.CNhs11195.1350-25C30.00
cecum, adult.CNhs10467.37-13H40.00
cerebellum, adult.CNhs10494.15-8B20.00
cerebellum, neonate N30.CNhs11135.1395-42I20.21
colon, adult.CNhs10468.36-18H70.77
common myeloid progenitor CMP, biol_rep1.CNhs12550.12122-128C70.84
common myeloid progenitor CMP, biol_rep2.CNhs12203.12125-128D10.00
common myeloid progenitor CMP, biol_rep3.CNhs12551.12128-128D41.14
corpora quadrigemina, adult.CNhs10501.16-22A40.15
corpus striatum, adult.CNhs10487.19-21D80.46
corpus striatum, neonate N00.CNhs11226.630-43F10.00
cortex, adult.CNhs10473.12-14D50.17
cortex, neonate N30.CNhs11107.1392-42F20.00
diencephalon, adult.CNhs10482.20-12F20.21
diencephalon, neonate N30.CNhs11201.1388-42B20.00
epididymis and seminiferous tubule, neonate N00.CNhs11218.1310-23B10.81
epididymis and seminiferous tubule, neonate N30.CNhs11199.1387-42A20.12
epididymis, adult.CNhs10490.58-23B20.25
eyeball, adult.CNhs10484.31-12G40.00
eyeball, embryo E12.CNhs11016.345-16C60.39
eyeball, embryo E14.CNhs10521.399-16E20.23
eyeball, embryo E15.CNhs10593.426-16C90.18
eyeball, embryo E17.CNhs11023.1261-18D40.45
eyeball, neonate N00.CNhs11207.633-15C60.41
eyeball, neonate N01.CNhs11140.1532-43E70.90
eyeball, neonate N02.CNhs11205.1551-44G80.37
eyeball, neonate N16.CNhs11188.777-19A20.26
forelimb, embryo E11.CNhs10596.335-25E20.00
forelimb, embryo E12.CNhs10600.359-14H20.19
forelimb, embryo E13.CNhs10589.384-1E20.00
forelimb, embryo E14.CNhs10577.413-26A80.00
forelimb, embryo E15.CNhs11007.437-20E70.28
forelimb, embryo E17.CNhs10598.1517-43C40.00
forelimb, embryo E18.CNhs11008.1520-43B50.41
gonad, embryo E13.CNhs11044.1564-45I60.60
granulocyte macrophage progenitor GMP, biol_rep1.CNhs12206.12123-128C80.70
granulocyte macrophage progenitor GMP, biol_rep2.CNhs12202.12126-128D20.26
granulocyte macrophage progenitor GMP, biol_rep3.CNhs11928.12129-128D50.85
heart, embryo E11.CNhs10586.331-24E90.00
heart, embryo E12.CNhs11015.353-12F50.23
heart, embryo E13.CNhs11013.376-3I90.18
heart, embryo E14.CNhs10597.403-26D40.24
heart, embryo E15.CNhs11017.431-16C80.59
heart, embryo E16.CNhs11021.457-17C60.62
heart, embryo E17.CNhs11025.479-18E50.47
heart, embryo E18.CNhs11030.1283-20G30.54
heart, neonate N00.CNhs11213.639-21E30.47
heart, neonate N03.CNhs11221.1349-25I20.49
heart, neonate N10.CNhs11118.749-24G10.16
heart, neonate N16.CNhs11209.782-15G10.24
heart, neonate N20.CNhs11127.821-26I60.73
heart, neonate N25.CNhs11196.1351-25D30.00
heart, neonate N30.CNhs11202.1390-42D20.40
hippocampus, adult.CNhs10478.13-16E80.00
hippocampus, neonate N00.CNhs11228.627-43G10.21
intestinal mucosa, adult.CNhs10506.860-29I30.00
intestine, adult.CNhs10496.178-9A30.53
intestine, embryo E12.CNhs11019.1251-16I50.21
intestine, embryo E13.CNhs11010.381-16D50.00
intestine, embryo E15.CNhs10602.976-16D80.00
intestine, embryo E16.CNhs10585.463-22H40.00
intestine, embryo E17.CNhs10582.482-18D30.22
intestine, embryo E18.CNhs10526.1289-20F70.19
intestine, neonate N00.CNhs11126.644-26D10.00
intestine, neonate N01.CNhs11192.1322-23E90.99
intestine, neonate N06.CNhs11102.688-20B81.26
intestine, neonate N07.CNhs11095.720-20F20.60
intestine, neonate N10.CNhs11098.755-23A50.78
intestine, neonate N20.CNhs11187.827-18D10.90
intestine, neonate N25.CNhs11121.1352-25E31.08
intestine, neonate N30.CNhs11131.1384-42G10.40
kidney, embryo E14.CNhs10606.411-4I90.00
kidney, embryo E15.CNhs10997.434-16F80.46
kidney, embryo E16.CNhs10584.464-22A51.13
kidney, embryo E17.CNhs11028.483-18I20.41
kidney, embryo E18.CNhs11001.1288-20C70.58
kidney, neonate N00.CNhs11214.646-21G70.35
kidney, neonate N10.CNhs11206.758-6D50.25
kidney, neonate N20.CNhs11113.832-19I10.15
kidney, neonate N25.CNhs11122.1353-25F30.94
kidney, neonate N30.CNhs11203.1385-42H10.62
liver, adult pregnant day01.CNhs10466.508-5B20.59
liver, embryo E12.CNhs10601.355-15F80.17
liver, embryo E13.CNhs10524.378-3H60.20
liver, embryo E14.CNhs10594.409-16E10.00
liver, embryo E15.CNhs10520.433-16D70.20
liver, embryo E16.CNhs10523.462-17F50.48
liver, embryo E17.CNhs10510.481-18A30.51
liver, embryo E18.CNhs10579.499-43G40.00
liver, neonate N00.CNhs11117.641-24F40.97
liver, neonate N03.CNhs11123.1345-25G21.65
liver, neonate N06.CNhs11101.684-20A82.88
liver, neonate N07.CNhs11103.716-20H20.37
liver, neonate N10.CNhs11115.751-24B90.62
liver, neonate N20.CNhs11220.823-25A31.01
liver, neonate N25.CNhs11198.1368-26H11.44
liver, neonate N30.CNhs11106.1382-42D11.93
lung, adult.CNhs10474.28-22B10.00
lung, embryo E12.CNhs10522.354-16G20.38
lung, embryo E14.CNhs10604.404-26F80.00
lung, embryo E15.CNhs11020.432-17C51.36
lung, embryo E16.CNhs10998.458-17B60.94
lung, embryo E17.CNhs10605.480-44A60.17
lung, embryo E18.CNhs10583.1287-20I60.24
lung, neonate N00.CNhs11224.640-42C60.20
lung, neonate N06.CNhs11212.683-20E50.00
lung, neonate N07.CNhs11111.715-19A30.89
lung, neonate N10.CNhs11219.750-23E60.32
lung, neonate N20.CNhs11109.822-18A40.33
lung, neonate N25.CNhs11119.1359-25C71.04
lung, neonate N30.CNhs11133.1394-42H20.43
macrophage, bone marrow derived, pool1.CNhs11457.3560-170A10.00
macrophage, bone marrow derived, pool2.CNhs11532.3632-171A10.54
mammary gland, adult lactating day02.CNhs10480.595-22B60.00
mammary gland, adult pregnant day19.CNhs10476.588-5H20.00
medulla oblongata, adult.CNhs10477.17-12C20.16
medulla oblongata, neonate N30.CNhs11200.1396-42A30.47
mouse fibroblast cell line: CRL-1658 NIH/3T3.CNhs11093.1830-49C70.16
muscle (biceps femoris), neonate N30.CNhs11129.1389-42C21.01
neurospheres - enteric neuron derived, biol_rep1.CNhs13087.11810-124E10.00
neurospheres - enteric neuron derived, biol_rep2.CNhs13088.11811-124E20.00
neurospheres - enteric neuron derived, biol_rep3.CNhs13089.11812-124E30.22
neurospheres - parasympathetic neuron derived, biol_rep1.CNhs13084.11807-124D70.00
neurospheres - parasympathetic neuron derived, biol_rep2.CNhs13085.11808-124D80.00
neurospheres - parasympathetic neuron derived, biol_rep3.CNhs13086.11809-124D90.28
neurospheres - sympathetic neuron derived, biol_rep1.CNhs13081.11804-124D40.40
neurospheres - sympathetic neuron derived, biol_rep2.CNhs13082.11805-124D50.00
neurospheres - sympathetic neuron derived, biol_rep3.CNhs13083.11806-124D60.00
olfactory brain, adult.CNhs10489.18-22I90.00
ovary, adult.CNhs10507.91-2I70.00
ovary, embryo E18.CNhs11040.505-44H70.36
ovary, neonate N00.CNhs11217.1299-22I40.81
oviduct, adult pregnant day01.CNhs10500.988-6G60.49
pancreas, adult.CNhs10486.34-16E40.00
pancreas, embryo E14.CNhs11012.405-44F40.00
pancreas, embryo E15.CNhs11042.1556-45F20.60
pancreas, embryo E16.CNhs11003.460-26E50.38
pancreas, embryo E17.CNhs10599.1558-45G30.00
pancreas, embryo E18.CNhs10580.1535-43I70.31
pancreas, neonate N00.CNhs11105.645-26G90.00
pancreas, neonate N01.CNhs11138.1531-43D71.09
pancreas, neonate N02.CNhs11139.1539-43D80.00
pancreas, neonate N16.CNhs11136.787-43B60.32
pancreas, neonate N25.CNhs11094.1555-45E21.05
pancreas, neonate N30.CNhs11182.1548-44H50.00
pituitary gland, adult.CNhs10493.21-1G80.34
pituitary gland, embryo E12.CNhs11018.346-16E60.54
pituitary gland, embryo E13.CNhs11009.370-44C70.13
pituitary gland, embryo E14.CNhs11037.398-44A50.64
pituitary gland, embryo E15.CNhs10592.427-16B90.00
pituitary gland, embryo E16.CNhs11036.449-43F60.36
pituitary gland, embryo E17.CNhs11039.1265-44F50.16
pituitary gland, neonate N00.CNhs11190.1308-22E90.30
placenta, adult pregnant day10.CNhs10472.539-13I70.47
placenta, adult pregnant day17.CNhs10464.577-18G30.21
prostate, adult.CNhs10470.859-1F80.00
skin, adult.CNhs10492.30-1C30.33
skin, neonate N00.CNhs11124.650-25G40.32
skin, neonate N03.CNhs11215.662-22H30.30
skin, neonate N06.CNhs11097.693-20I50.60
skin, neonate N10.CNhs11108.762-6C40.82
small intestine, neonate N16.CNhs11114.790-21I10.29
spinal cord, adult.CNhs10505.24-13C90.00
spleen, adult.CNhs10465.25-2G20.17
spleen, embryo E16.CNhs11035.461-43C10.21
spleen, embryo E18.CNhs11011.1271-21F20.00
spleen, neonate N10.CNhs11116.752-24D10.00
spleen, neonate N20.CNhs11112.824-19H10.41
spleen, neonate N25.CNhs11099.1354-25G30.23
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep1.CNhs12534.12121-128C60.34
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep2.CNhs12535.12124-128C90.70
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep3.CNhs12536.12127-128D30.55
stomach, adult.CNhs10503.33-1H60.00
stomach, embryo E12.CNhs10588.356-43E30.16
stomach, embryo E15.CNhs10603.1252-16G80.41
stomach, embryo E16.CNhs11022.459-17D40.22
stomach, embryo E17.CNhs11006.1035-18D51.05
stomach, embryo E18.CNhs10999.1286-20C60.00
stomach, neonate N03.CNhs11193.1340-24B80.54
stomach, neonate N07.CNhs11210.718-18A90.00
stomach, neonate N25.CNhs11104.1355-25E40.52
stomach, neonate N30.CNhs11134.1386-42I10.26
submandibular gland, adult.CNhs10469.59-29C10.62
testis, adult.CNhs10504.57-7G50.00
testis, embryo E13.CNhs11031.389-23F50.75
testis, embryo E15.CNhs11034.443-27C50.50
testis, embryo E16.CNhs11033.470-26G50.00
testis, embryo E17.CNhs11029.486-18I50.65
testis, embryo E18.CNhs11027.503-18G50.51
testis, neonate N00.CNhs11189.1300-22B70.47
testis, neonate N07.CNhs11222.726-26I40.13
testis, neonate N10.CNhs11204.763-44D90.31
testis, neonate N20.CNhs11110.839-18H30.48
testis, neonate N30.CNhs11130.1391-42E20.86
thymus, adult.CNhs10471.38-12B50.00
thymus, embryo E14.CNhs11041.402-44I40.20
thymus, embryo E15.CNhs11005.430-45I20.51
thymus, embryo E16.CNhs11002.456-26C51.04
thymus, embryo E17.CNhs10581.478-18C10.00
thymus, embryo E18.CNhs10595.1273-19G40.20
thymus, neonate N02.CNhs11181.1541-43F80.24
thymus, neonate N03.CNhs11137.2104-43C70.00
thymus, neonate N06.CNhs11197.681-26C40.30
thymus, neonate N07.CNhs11211.713-19D30.46
thymus, neonate N10.CNhs11194.748-24E40.30
thymus, neonate N20.CNhs11186.820-7A20.29
thymus, neonate N25.CNhs11125.1362-25G70.10
thymus, neonate N30.CNhs11132.1393-42G20.47
tongue, adult.CNhs10499.32-1B41.13
trophoblast stem cell line B1 differentiation, day00, biol_rep1.CNhs13526.13297-142H30.22
trophoblast stem cell line R1AB differentiation, day00, biol_rep1.CNhs13481.13283-142F70.00
trophoblast stem cell line Rybp differentiation, day00, biol_rep1.CNhs13519.13290-142G50.00
urinary bladder, adult.CNhs10481.879-12E40.00
uterus, adult pregnant day19.CNhs10497.590-15F50.00
uterus, adult.CNhs10509.92-27E50.00
vagina, adult.CNhs10502.89-27D50.86
vesicular gland, adult.CNhs10491.51-27F80.50
visual cortex - wildtype, neonate N15, donor1.CNhs13031.10235-104A10.00
visual cortex - wildtype, neonate N15, donor2.CNhs13032.10236-104A20.46
visual cortex - wildtype, neonate N15, donor3.CNhs13033.10237-104A30.00
visual cortex - wildtype, neonate N15, donor5.CNhs13820.10349-105D70.69
visual cortex - wildtype, neonate N30, donor1.CNhs13034.10238-104A40.69
visual cortex - wildtype, neonate N30, donor2.CNhs13035.10239-104A50.00
visual cortex - wildtype, neonate N30, donor3.CNhs13036.10240-104A60.00
visual cortex - wildtype, neonate N60-70, donor1.CNhs13037.10241-104A70.00
visual cortex - wildtype, neonate N60-70, donor2.CNhs13038.10242-104A80.00
visual cortex - wildtype, neonate N60-70, donor3.CNhs13039.10243-104A90.00
whole body, embryo E11.CNhs11014.324-5I80.21
whole body, embryo E12.CNhs10587.857-27C90.00
whole body, embryo E13.CNhs10512.372-23H20.51
whole body, embryo E14.5.CNhs10578.420-27D20.00
whole body, embryo E14.CNhs10519.395-14B10.21
whole body, embryo E16.CNhs10514.453-14F20.00
whole body, embryo E17.5, pool1 (internal control).CNhs10479.3139-67G50.22
whole body, embryo E17.5, pool1 (internal control).CNhs10495.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs10511.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs10527.3139-67G50.25
whole body, embryo E17.5, pool1 (internal control).CNhs10591.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs10607.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs10623.3139-67G50.28
whole body, embryo E17.5, pool1 (internal control).CNhs10639.3139-67G50.32
whole body, embryo E17.5, pool1 (internal control).CNhs10655.3139-67G50.17
whole body, embryo E17.5, pool1 (internal control).CNhs10725.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs10749.3139-67G50.12
whole body, embryo E17.5, pool1 (internal control).CNhs10840.3139-67G50.77
whole body, embryo E17.5, pool1 (internal control).CNhs10856.3139-67G50.41
whole body, embryo E17.5, pool1 (internal control).CNhs10880.3139-67G50.15
whole body, embryo E17.5, pool1 (internal control).CNhs11000.3139-67G50.34
whole body, embryo E17.5, pool1 (internal control).CNhs11024.3139-67G50.35
whole body, embryo E17.5, pool1 (internal control).CNhs11032.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs11048.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs11072.3139-67G50.09
whole body, embryo E17.5, pool1 (internal control).CNhs11080.3139-67G50.34
whole body, embryo E17.5, pool1 (internal control).CNhs11096.3139-67G50.18
whole body, embryo E17.5, pool1 (internal control).CNhs11120.3139-67G50.53
whole body, embryo E17.5, pool1 (internal control).CNhs11128.3139-67G50.54
whole body, embryo E17.5, pool1 (internal control).CNhs11184.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs11208.3139-67G50.12
whole body, embryo E17.5, pool1 (internal control).CNhs11216.3139-67G50.49
whole body, embryo E17.5, pool1 (internal control).CNhs11246.3139-67G50.41
whole body, embryo E17.5, pool1 (internal control).CNhs11278.3139-67G50.62
whole body, embryo E17.5.CNhs10513.490-9F90.39
whole body, embryo E17.CNhs10517.475-3I50.00
whole body, embryo E18.CNhs10516.493-3B30.23
whole body, neonate N00.CNhs10525.657-19C20.00
whole body, neonate N01.CNhs10576.659-23C60.38
whole body, neonate N06.CNhs10515.692-21D10.44
whole body, neonate N10.CNhs10518.761-6B40.23





  • Click each plot point to find sample in table


Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data

Cell type
Ontology termp-valuen
multi-potent skeletal muscle stem cell2.75e-099

Uber anatomy
Ontology termp-valuen
musculature of body1.73e-1110
skeletal muscle tissue2.75e-099
striated muscle tissue2.75e-099
muscle tissue2.75e-099
multilaminar epithelium2.75e-099
epithelial vesicle2.75e-099
musculature2.75e-099
somite2.75e-099
myotome2.75e-099
presomitic mesoderm2.75e-099
presumptive segmental plate2.75e-099
dermomyotome2.75e-099
trunk paraxial mesoderm2.75e-099
trunk mesenchyme8.91e-0945
dense mesenchyme tissue1.51e-0711
paraxial mesoderm1.51e-0711
presumptive paraxial mesoderm1.51e-0711
trunk1.54e-0790
mesenchyme5.10e-0761
entire embryonic mesenchyme5.10e-0761
liver6.54e-0722
epithelial sac6.54e-0722
digestive gland6.54e-0722
epithelium of foregut-midgut junction6.54e-0722
anatomical boundary6.54e-0722
hepatobiliary system6.54e-0722
foregut-midgut junction6.54e-0722
hepatic diverticulum6.54e-0722
liver primordium6.54e-0722
septum transversum6.54e-0722
liver bud6.54e-0722

Disease
Ontology termp-valuen
musculoskeletal system cancer3.73e-113
muscle cancer3.73e-113







Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process. Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process. Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.

Retrieved from "http://f5-webapp4.gsc.riken.jp/resource_browser/index.php?title=FFCP_PHASE1:Mm9::chrX:35807985..35807987,-&oldid=3065612"