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FFCP PHASE1:Mm9::chrX:55283799..55283813,+: Difference between revisions

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{{FFCP
{{FFCP|EntrezGene=22773|HGNC=|MCL_coexpression_id=2485|UniProt=Q62521,A2AWK3|association_with_transcript=0bp_to_NM_009575,uc009tho.1,uc009thp.1_5end|description=CAGE_peak_1_at_Zic3_5end|id=chrX:55283799..55283813,+|ontology_enrichment_celltype=CL:0000117!1.67e-13!23;CL:0000337!1.67e-13!23;CL:0002319!4.58e-10!43;CL:0000221!1.41e-09!44;CL:0000133!1.41e-09!44;CL:0000055!9.88e-08!50;CL:0000540!8.30e-07!33;CL:0000047!8.30e-07!33;CL:0000031!8.30e-07!33;CL:0000404!8.30e-07!33|ontology_enrichment_celltype_v019_2=CL:0000117,1.35e-15,23;CL:0000337,1.35e-15,23;CL:0002319,6.00e-12,43;CL:0000221,1.90e-11,44;CL:0000133,1.90e-11,44;CL:0000540,1.48e-08,33;CL:0000047,1.48e-08,33;CL:0000031,1.48e-08,33;CL:0000404,1.48e-08,33;CL:0000393,8.27e-07,39;CL:0000211,8.27e-07,39|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0001017!3.23e-22!73;UBERON:0005743!3.23e-22!73;UBERON:0000033!6.08e-22!63;UBERON:0001049!2.61e-21!52;UBERON:0005068!2.61e-21!52;UBERON:0006241!2.61e-21!52;UBERON:0007135!2.61e-21!52;UBERON:0000073!5.34e-21!75;UBERON:0001016!5.34e-21!75;UBERON:0004121!1.00e-20!102;UBERON:0000924!1.00e-20!102;UBERON:0006601!1.00e-20!102;UBERON:0000955!1.79e-20!50;UBERON:0006238!1.79e-20!50;UBERON:0002346!2.59e-20!71;UBERON:0003075!2.59e-20!71;UBERON:0007284!2.59e-20!71;UBERON:0002616!1.07e-19!49;UBERON:0003056!1.33e-17!49;UBERON:0000153!2.24e-14!94;UBERON:0003080!1.60e-13!40;UBERON:0002780!6.32e-13!39;UBERON:0001890!6.32e-13!39;UBERON:0006240!6.32e-13!39;UBERON:0002020!1.71e-12!34;UBERON:0007811!3.31e-11!86;UBERON:0002791!1.10e-09!29;UBERON:0003528!1.10e-09!29;UBERON:0001893!1.10e-09!29;UBERON:0003076!5.65e-09!12;UBERON:0003057!5.65e-09!12|ontology_enrichment_uberon_v019_2=UBERON:0002346,2.16e-21,64;UBERON:0003075,2.16e-21,64;UBERON:0007284,2.16e-21,64;UBERON:0001017,3.70e-20,73;UBERON:0000073,6.52e-20,54;UBERON:0004121,8.00e-20,95;UBERON:0000924,8.00e-20,95;UBERON:0006601,8.00e-20,95;UBERON:0001016,3.79e-19,75;UBERON:0001049,3.20e-18,52;UBERON:0005068,3.20e-18,52;UBERON:0006241,3.20e-18,52;UBERON:0007135,3.20e-18,52;UBERON:0010371,1.84e-17,73;UBERON:0000955,5.27e-15,47;UBERON:0006238,5.27e-15,47;UBERON:0003056,1.62e-14,49;UBERON:0002616,3.21e-14,46;UBERON:0010314,1.31e-10,92;UBERON:0003076,2.84e-10,12;UBERON:0003057,2.84e-10,12;UBERON:0003080,4.29e-10,40;UBERON:0002020,4.68e-10,34;UBERON:0002780,1.71e-09,39;UBERON:0001890,1.71e-09,39;UBERON:0006240,1.71e-09,39;UBERON:0003528,3.68e-07,29;UBERON:0002791,3.68e-07,29;UBERON:0001893,3.68e-07,29|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.44573593256819,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,36.7723931843578,3.92445281484804,10.1055644057857,19.6374198065026,3.3596741190087,25.8754615856949,0,0,0,0,0,1.54701627683233,24.2779753031517,22.2176211294254,15.2119536841483,2.03306719241479,0.889294796111139,0,0,0,0.599200221036809,7.30014780110954,1.03689612308478,2.02508907497536,1.89292465216244,1.99955689082663,3.3130281142742,2.08234358665422,1.91690942036473,1.83843757322004,7.70811166995721,7.2781782708557,6.14426133024974,46.8196321442188,42.9077048495301,36.98484930953,1.3959149950069,1.68828783009504,1.37518422999129,5.59794312399969,6.54909731675874,10.6247684120421,0,0,0,0,0,0,0,0,0.280888840263504,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.150722640552623,0.117588707135705,0,0,0,0,0,0,0,0,10.8328894894272,9.42510180660548,0,0,0,0,4.79330046095433,3.20250421973039,3.8952849154988,1.91206752211504,3.06858548796397,13.2984348518118,5.353961681236,0,0.248813941220186,0,0,15.2240918266363,7.81667155073808,6.84236093260327,5.27466862425003,4.150226448231,5.12454881139399,3.18585863503078,1.29351685369508,27.1615671095381,13.4265316919152,8.2697028357056,5.47989331068937,4.72680323683516,1.74126083261083,2.05782136407943,0.995171334092466,0,0,0,0,0,0.180062061461015,0,0.196764231747404,0.154267112887378,0,0,0,0,0,0,0,0,0,4.20579897128254,5.04232600658494,0,0,0.213288250535234,0,0,0.201683524623343,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.166845105716094,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.49541651965817,3.6335622843583,0,0,0,0,0,0,0,0,0,0,0,9.96096080907602,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.340439605753788,7.0223826672211,2.97524972700335,1.92903331528433,2.83744373827638,0.891844088010353,2.30368628842969,0,0,0.847328283455281,0,0.16488625294148,1.29171541356724,0.844380948994182,0.358117032009409,0.164140899745061,0,4.45020724825223,0,0,0,0,0,0,0,0,0,0,0.474503990371703,0,0,0,0,0,0,0,0,0,0,2.0932316446157,1.15820943319968,0.194451188344048,0,0,0.234714477291508,0,0,0,0.288030006257865,0,0.202725215290164,0,0,0,0,0,0,0,0,0,0,0,0,0,2.44184548711471,3.58855426437903,2.3503846290971,0,0,0,0,0,1.12950368523413,0.460325236507177,0.572895513439397,2.23409137046794,0.685082519770642,0,0,0.45032120322422,0.453142408984205,0.51776031175182,14.6340160093689,13.9658705690361,8.19521307619844,5.34834777550247,3.77303692730368,2.20612210140017,2.22246727801615,2.06035057238894,2.56735367673452,1.51618327058278,1.77435509923168,2.45214243801899,2.99652823903624,2.30490548657529,2.46972516509137,3.33405583898152,1.85414921511769,1.92909220463705,1.23625770240992,1.47198920134397,1.02860775715625,2.30718548007139,1.66905332963125,2.61623549938191,2.25862512996793,2.03075058940024,1.28049581010941,2.89376682581627,1.62964936615034,0.561142271657738,2.01679530811096,1.87158516513571,1.63692417267876,3.09873682371932,1.54325288784913,4.49659040288303,2.33931608445408,1.28922632428979,1.14772999241306,0.661774257358546,0.463735671240843|short_description=p1@Zic3}}
|EntrezGene=22773
|HGNC=
|MCL_coexpression_id=2485
|UniProt=Q62521,A2AWK3
|association_with_transcript=0bp_to_NM_009575,uc009tho.1,uc009thp.1_5end
|description=CAGE_peak_1_at_Zic3_5end
|id=chrX:55283799..55283813,+
|ontology_enrichment_celltype=CL:0000117!1.67e-13!23;CL:0000337!1.67e-13!23;CL:0002319!4.58e-10!43;CL:0000221!1.41e-09!44;CL:0000133!1.41e-09!44;CL:0000055!9.88e-08!50;CL:0000540!8.30e-07!33;CL:0000047!8.30e-07!33;CL:0000031!8.30e-07!33;CL:0000404!8.30e-07!33
|ontology_enrichment_celltype_v019_2=CL:0000117,1.35e-15,23;CL:0000337,1.35e-15,23;CL:0002319,6.00e-12,43;CL:0000221,1.90e-11,44;CL:0000133,1.90e-11,44;CL:0000540,1.48e-08,33;CL:0000047,1.48e-08,33;CL:0000031,1.48e-08,33;CL:0000404,1.48e-08,33;CL:0000393,8.27e-07,39;CL:0000211,8.27e-07,39
|ontology_enrichment_disease=
|ontology_enrichment_disease_v019_2=
|ontology_enrichment_uberon=UBERON:0001017!3.23e-22!73;UBERON:0005743!3.23e-22!73;UBERON:0000033!6.08e-22!63;UBERON:0001049!2.61e-21!52;UBERON:0005068!2.61e-21!52;UBERON:0006241!2.61e-21!52;UBERON:0007135!2.61e-21!52;UBERON:0000073!5.34e-21!75;UBERON:0001016!5.34e-21!75;UBERON:0004121!1.00e-20!102;UBERON:0000924!1.00e-20!102;UBERON:0006601!1.00e-20!102;UBERON:0000955!1.79e-20!50;UBERON:0006238!1.79e-20!50;UBERON:0002346!2.59e-20!71;UBERON:0003075!2.59e-20!71;UBERON:0007284!2.59e-20!71;UBERON:0002616!1.07e-19!49;UBERON:0003056!1.33e-17!49;UBERON:0000153!2.24e-14!94;UBERON:0003080!1.60e-13!40;UBERON:0002780!6.32e-13!39;UBERON:0001890!6.32e-13!39;UBERON:0006240!6.32e-13!39;UBERON:0002020!1.71e-12!34;UBERON:0007811!3.31e-11!86;UBERON:0002791!1.10e-09!29;UBERON:0003528!1.10e-09!29;UBERON:0001893!1.10e-09!29;UBERON:0003076!5.65e-09!12;UBERON:0003057!5.65e-09!12
|ontology_enrichment_uberon_v019_2=UBERON:0002346,2.16e-21,64;UBERON:0003075,2.16e-21,64;UBERON:0007284,2.16e-21,64;UBERON:0001017,3.70e-20,73;UBERON:0000073,6.52e-20,54;UBERON:0004121,8.00e-20,95;UBERON:0000924,8.00e-20,95;UBERON:0006601,8.00e-20,95;UBERON:0001016,3.79e-19,75;UBERON:0001049,3.20e-18,52;UBERON:0005068,3.20e-18,52;UBERON:0006241,3.20e-18,52;UBERON:0007135,3.20e-18,52;UBERON:0010371,1.84e-17,73;UBERON:0000955,5.27e-15,47;UBERON:0006238,5.27e-15,47;UBERON:0003056,1.62e-14,49;UBERON:0002616,3.21e-14,46;UBERON:0010314,1.31e-10,92;UBERON:0003076,2.84e-10,12;UBERON:0003057,2.84e-10,12;UBERON:0003080,4.29e-10,40;UBERON:0002020,4.68e-10,34;UBERON:0002780,1.71e-09,39;UBERON:0001890,1.71e-09,39;UBERON:0006240,1.71e-09,39;UBERON:0003528,3.68e-07,29;UBERON:0002791,3.68e-07,29;UBERON:0001893,3.68e-07,29
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.44573593256819,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,36.7723931843578,3.92445281484804,10.1055644057857,19.6374198065026,3.3596741190087,25.8754615856949,0,0,0,0,0,1.54701627683233,24.2779753031517,22.2176211294254,15.2119536841483,2.03306719241479,0.889294796111139,0,0,0,0.599200221036809,7.30014780110954,1.03689612308478,2.02508907497536,1.89292465216244,1.99955689082663,3.3130281142742,2.08234358665422,1.91690942036473,1.83843757322004,7.70811166995721,7.2781782708557,6.14426133024974,46.8196321442188,42.9077048495301,36.98484930953,1.3959149950069,1.68828783009504,1.37518422999129,5.59794312399969,6.54909731675874,10.6247684120421,0,0,0,0,0,0,0,0,0.280888840263504,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.150722640552623,0.117588707135705,0,0,0,0,0,0,0,0,10.8328894894272,9.42510180660548,0,0,0,0,4.79330046095433,3.20250421973039,3.8952849154988,1.91206752211504,3.06858548796397,13.2984348518118,5.353961681236,0,0.248813941220186,0,0,15.2240918266363,7.81667155073808,6.84236093260327,5.27466862425003,4.150226448231,5.12454881139399,3.18585863503078,1.29351685369508,27.1615671095381,13.4265316919152,8.2697028357056,5.47989331068937,4.72680323683516,1.74126083261083,2.05782136407943,0.995171334092466,0,0,0,0,0,0.180062061461015,0,0.196764231747404,0.154267112887378,0,0,0,0,0,0,0,0,0,4.20579897128254,5.04232600658494,0,0,0.213288250535234,0,0,0.201683524623343,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.166845105716094,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.49541651965817,3.6335622843583,0,0,0,0,0,0,0,0,0,0,0,9.96096080907602,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.340439605753788,7.0223826672211,2.97524972700335,1.92903331528433,2.83744373827638,0.891844088010353,2.30368628842969,0,0,0.847328283455281,0,0.16488625294148,1.29171541356724,0.844380948994182,0.358117032009409,0.164140899745061,0,4.45020724825223,0,0,0,0,0,0,0,0,0,0,0.474503990371703,0,0,0,0,0,0,0,0,0,0,2.0932316446157,1.15820943319968,0.194451188344048,0,0,0.234714477291508,0,0,0,0.288030006257865,0,0.202725215290164,0,0,0,0,0,0,0,0,0,0,0,0,0,2.44184548711471,3.58855426437903,2.3503846290971,0,0,0,0,0,1.12950368523413,0.460325236507177,0.572895513439397,2.23409137046794,0.685082519770642,0,0,0.45032120322422,0.453142408984205,0.51776031175182,14.6340160093689,13.9658705690361,8.19521307619844,5.34834777550247,3.77303692730368,2.20612210140017,2.22246727801615,2.06035057238894,2.56735367673452,1.51618327058278,1.77435509923168,2.45214243801899,2.99652823903624,2.30490548657529,2.46972516509137,3.33405583898152,1.85414921511769,1.92909220463705,1.23625770240992,1.47198920134397,1.02860775715625,2.30718548007139,1.66905332963125,2.61623549938191,2.25862512996793,2.03075058940024,1.28049581010941,2.89376682581627,1.62964936615034,0.561142271657738,2.01679530811096,1.87158516513571,1.63692417267876,3.09873682371932,1.54325288784913,4.49659040288303,2.33931608445408,1.28922632428979,1.14772999241306,0.661774257358546,0.463735671240843
|short_description=p1@Zic3
}}

Revision as of 19:56, 14 September 2013

Short description:p1@Zic3
Species:Mouse (Mus musculus)
DPI dataset: NA
TSS-like-by-RIKEN-classifier(Yes/No): NA
DHS support(Yes/No): NA
Description: CAGE_peak_1_at_Zic3_5end
Coexpression cluster:MCL_coexpression_mm9:2485
Association with transcript: 0bp_to_NM_009575, uc009tho.1, uc009thp.1_5end
EntrezGene:Zic3
Link to Zenbu:ZENBU


View on UCSC genome browser

Mouse over to see Genome browser image, Click image to go to Genome browser


CAGE Expression

Sample

p1@Zic3

Atoh1+ Inner ear hair cells - organ of corti, pool1.CNhs12533.12158-128G70.00
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13242.11850-124I50.00
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13233.11851-124I60.00
CD326+ enterocyte, pool1.CNhs13542.11848-124I30.00
CD326+ enterocyte, pool2.CNhs13197.11849-124I40.00
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13236.11852-124I70.00
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13210.11853-124I80.00
CD4+CD25+ regulatory T cells, pool2 (Balb_cAJcl).CNhs13221.11818-124E90.00
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool1 (C57BL_6J).CNhs13219.11816-124E70.00
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool2 (Balb_cAJcl).CNhs13226.11820-124F20.00
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool1 (C57BL_6J).CNhs13218.11815-124E60.00
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool2 (Balb_cAJcl).CNhs13225.11819-124F10.00
CD4+CD25-CD44- naive conventional T cells, pool1 (C57BL_6J).CNhs13217.11813-124E40.00
CD4+CD25-CD44- naive conventional T cells, pool2 (Balb_cAJcl).CNhs13220.11817-124E80.00
CD41+ megakaryocyte cancer, donor1.CNhs13079.11774-124A10.00
CD41+ megakaryocyte cancer, donor2.CNhs13213.11776-124A30.00
CD41+ megakaryocyte cancer, donor3.CNhs13506.11778-124A50.00
CD41+ megakaryocyte control, donor1.CNhs13212.11775-124A20.00
CD41+ megakaryocyte control, donor2.CNhs13214.11777-124A40.00
CD41+ megakaryocyte control, donor3.CNhs13201.11779-124A60.00
Clontech Mouse Universal Reference Total RNA, pool1.CNhs10609.10001-101A31.45
EBF KO HPCs induced to T cell, 00hr00min, biol_rep1.CNhs11058.12972-138H20.00
EBF KO HPCs induced to T cell, 00hr00min, biol_rep2.CNhs12980.12988-138I90.00
Follicle Associated Epithelium, pool2.CNhs13211.10262-104D10.00
Follicle Associated Epithelium, pool3.CNhs13200.10263-104D20.00
GP2+ M cell, pool1.CNhs13228.11845-124H90.00
GP2+ M cell, pool2.CNhs13231.11846-124I10.00
GP2+ M cell, pool3.CNhs13240.11847-124I20.00
Ileum epithelium, pool1.CNhs13199.10252-104B90.00
Ileum epithelium, pool2.CNhs13232.10253-104C10.00
Ileum epithelium, treated with RANKL, day03, pool3.CNhs13234.10260-104C80.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep1.CNhs12449.13063-139I30.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep2.CNhs12668.13129-140G60.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep3.CNhs12770.13195-141E90.00
Lgr5 positive intestinal stem cells, pool1.CNhs12555.12228-129F50.00
Lgr5 positive intestinal stem cells, pool2.CNhs12556.12229-129F60.00
Lgr5 positive intestinal stem cells, pool3.CNhs12557.12230-129F70.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor1 (10,11,12 3LL).CNhs12539.12159-128G80.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor2 (0127 3LL).CNhs12198.12161-128H10.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor3 (0128 3LL).CNhs12542.12163-128H30.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor1 (4,5,6PBS).CNhs12540.12160-128G90.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor2 (0127 PBS).CNhs12541.12162-128H20.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor3 (0128 PBS).CNhs12543.12164-128H40.00
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep1.CNhs11055.11484-119D80.00
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep2.CNhs11056.11485-119D90.00
Mouse Aortic Smooth Muscle cells, donor1.CNhs11297.11299-117B30.00
Mouse Astrocytes - cerebellar, donor1.CNhs13077.11708-123B736.77
Mouse Astrocytes - cerebellar, donor2.CNhs12076.11550-120C23.92
Mouse Astrocytes - hippocampus, donor1.CNhs12129.11709-123B810.11
Mouse Astrocytes - hippocampus, donor2.CNhs12077.11551-120C319.64
Mouse Astrocytes, donor2.CNhs12078.11552-120C43.36
Mouse Astrocytes, donor3.CNhs12107.11633-122C425.88
Mouse CD19+ B Cells, donor1.CNhs13531.11856-125A20.00
Mouse CD4+ T Cells, donor1.CNhs13509.11854-124I90.00
Mouse CD8+ T Cells, donor1.CNhs13511.11855-125A10.00
Mouse Cardiac Myocytes, donor1.CNhs12355.11711-123C10.00
Mouse Cardiac Myocytes, donor2.CNhs12356.11729-123E10.00
Mouse Cardiac Myocytes, donor3.CNhs12353.11634-122C51.55
Mouse Granule cells, donor1.CNhs12131.11713-123C324.28
Mouse Granule cells, donor2.CNhs12357.11731-123E322.22
Mouse Granule cells, donor3.CNhs12108.11636-122C715.21
Mouse Meningeal cells, donor1.CNhs12132.11716-123C62.03
Mouse Meningeal cells, donor3.CNhs12109.11639-122D10.89
Mouse Mesenchymal stem cells - bone marrow derived, donor1.CNhs12628.11717-123C70.00
Mouse Mesenchymal stem cells - bone marrow derived, donor2.CNhs12633.11735-123E70.00
Mouse Mesenchymal stem cells - bone marrow derived, donor3.CNhs12616.11640-122D20.00
Mouse Microglia, donor1.CNhs12629.11718-123C80.60
Mouse Microglia, donor2.CNhs12634.11736-123E87.30
Mouse Neurons - cortical, donor1.CNhs12025.11724-123D51.04
Mouse Neurons - cortical, donor2.CNhs11947.11742-123F52.03
Mouse Neurons - cortical, donor3.CNhs12112.11647-122D91.89
Mouse Neurons - dorsal spinal cord, donor2.CNhs12635.11738-123F12.00
Mouse Neurons - dorsal spinal cord, donor3.CNhs12618.11643-122D53.31
Mouse Neurons - hippocampal, donor1.CNhs12133.11721-123D22.08
Mouse Neurons - hippocampal, donor2.CNhs12359.11739-123F21.92
Mouse Neurons - hippocampal, donor3.CNhs12110.11644-122D61.84
Mouse Neurons - raphe, donor1.CNhs12631.11722-123D37.71
Mouse Neurons - raphe, donor2.CNhs12636.11740-123F37.28
Mouse Neurons - raphe, donor3.CNhs12619.11645-122D76.14
Mouse Neurons - striatal, donor1.CNhs12134.11723-123D446.82
Mouse Neurons - striatal, donor2.CNhs12360.11741-123F442.91
Mouse Neurons - striatal, donor3.CNhs12111.11646-122D836.98
Mouse Neurons - substantia nigra, donor4, tech_rep1.CNhs12612.11489-119E41.40
Mouse Neurons - substantia nigra, donor5.CNhs12614.11490-119E51.69
Mouse Neurons - substantia nigra, donor6.CNhs12643.11770-123I61.38
Mouse Neurons - ventral spinal cord, donor1.CNhs12632.11725-123D65.60
Mouse Neurons - ventral spinal cord, donor2.CNhs12638.11743-123F66.55
Mouse Neurons - ventral spinal cord, donor3.CNhs12113.11648-122E110.62
Mouse Schwann, donor1.CNhs12507.11728-123D90.00
Mouse Schwann, donor2.CNhs12573.11746-123F90.00
Mouse hepatic Sinusoidal Endothelial Cells, donor1.CNhs13209.11830-124G30.00
Mouse hepatic Stellate Cells (lipocyte), donor1.CNhs13196.11825-124F70.00
Mouse hepatocyte, donor1.CNhs13078.11714-123C40.00
Mouse hepatocyte, donor3.CNhs12615.11637-122C80.00
Mouse hepatocyte, donor6.CNhs13090.11822-124F40.00
Mouse hepatocyte, donor8.CNhs13091.11824-124F60.00
SABiosciences XpressRef Mouse Universal Total RNA, pool1.CNhs10611.10003-101A70.28
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep1 (000hC4).CNhs11939.12338-130I70.00
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep2 (000hC5).CNhs13275.12460-132E30.00
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep3 (000hC6).CNhs13324.12582-133I80.00
Sox2+ Supporting cells - organ of corti, pool1.CNhs12532.12157-128G60.00
TSt-4/DLL1 feeder cells, biol_rep1.CNhs13407.12971-138H10.00
TSt-4/DLL1 feeder cells, biol_rep2.CNhs13408.12987-138I80.00
TSt-4/DLL1 feeder cells, biol_rep3.CNhs13409.13003-139B60.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep1.CNhs13739.13367-143G10.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep2.CNhs13740.13368-143G20.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep3.CNhs13741.13369-143G30.00
Universal RNA - Mouse Normal Tissues Biochain, pool1.CNhs10613.10008-101B60.00
accessory axillary lymph node, adult.CNhs10475.1063-29H90.00
adrenal gland, adult.CNhs10508.49-24D70.00
adrenal gland, embryo E14.CNhs11038.406-44C50.00
adrenal gland, embryo E16.CNhs11004.1254-43D60.00
adrenal gland, embryo E17.CNhs11043.1263-45I10.00
adrenal gland, embryo E18.CNhs11026.1262-18F50.15
adrenal gland, neonate N00.CNhs11191.1311-23C10.12
adrenal gland, neonate N25.CNhs11223.1377-27I30.00
amnion, adult pregnant day17.5.CNhs10488.583-22A80.00
aorta, adult.CNhs10498.46-23H10.00
bone (os femoris), adult.CNhs10483.56-12G20.00
bone (os femoris), neonate N02.CNhs11227.1985-43F50.00
bone (os femoris), neonate N16.CNhs11225.1525-43A60.00
bone (os femoris), neonate N20.CNhs11195.1350-25C30.00
cecum, adult.CNhs10467.37-13H40.00
cerebellum, adult.CNhs10494.15-8B210.83
cerebellum, neonate N30.CNhs11135.1395-42I29.43
colon, adult.CNhs10468.36-18H70.00
common myeloid progenitor CMP, biol_rep1.CNhs12550.12122-128C70.00
common myeloid progenitor CMP, biol_rep2.CNhs12203.12125-128D10.00
common myeloid progenitor CMP, biol_rep3.CNhs12551.12128-128D40.00
corpora quadrigemina, adult.CNhs10501.16-22A44.79
corpus striatum, adult.CNhs10487.19-21D83.20
corpus striatum, neonate N00.CNhs11226.630-43F13.90
cortex, adult.CNhs10473.12-14D51.91
cortex, neonate N30.CNhs11107.1392-42F23.07
diencephalon, adult.CNhs10482.20-12F213.30
diencephalon, neonate N30.CNhs11201.1388-42B25.35
epididymis and seminiferous tubule, neonate N00.CNhs11218.1310-23B10.00
epididymis and seminiferous tubule, neonate N30.CNhs11199.1387-42A20.25
epididymis, adult.CNhs10490.58-23B20.00
eyeball, adult.CNhs10484.31-12G40.00
eyeball, embryo E12.CNhs11016.345-16C615.22
eyeball, embryo E14.CNhs10521.399-16E27.82
eyeball, embryo E15.CNhs10593.426-16C96.84
eyeball, embryo E17.CNhs11023.1261-18D45.27
eyeball, neonate N00.CNhs11207.633-15C64.15
eyeball, neonate N01.CNhs11140.1532-43E75.12
eyeball, neonate N02.CNhs11205.1551-44G83.19
eyeball, neonate N16.CNhs11188.777-19A21.29
forelimb, embryo E11.CNhs10596.335-25E227.16
forelimb, embryo E12.CNhs10600.359-14H213.43
forelimb, embryo E13.CNhs10589.384-1E28.27
forelimb, embryo E14.CNhs10577.413-26A85.48
forelimb, embryo E15.CNhs11007.437-20E74.73
forelimb, embryo E17.CNhs10598.1517-43C41.74
forelimb, embryo E18.CNhs11008.1520-43B52.06
gonad, embryo E13.CNhs11044.1564-45I61.00
granulocyte macrophage progenitor GMP, biol_rep1.CNhs12206.12123-128C80.00
granulocyte macrophage progenitor GMP, biol_rep2.CNhs12202.12126-128D20.00
granulocyte macrophage progenitor GMP, biol_rep3.CNhs11928.12129-128D50.00
heart, embryo E11.CNhs10586.331-24E90.00
heart, embryo E12.CNhs11015.353-12F50.00
heart, embryo E13.CNhs11013.376-3I90.18
heart, embryo E14.CNhs10597.403-26D40.00
heart, embryo E15.CNhs11017.431-16C80.20
heart, embryo E16.CNhs11021.457-17C60.15
heart, embryo E17.CNhs11025.479-18E50.00
heart, embryo E18.CNhs11030.1283-20G30.00
heart, neonate N00.CNhs11213.639-21E30.00
heart, neonate N03.CNhs11221.1349-25I20.00
heart, neonate N10.CNhs11118.749-24G10.00
heart, neonate N16.CNhs11209.782-15G10.00
heart, neonate N20.CNhs11127.821-26I60.00
heart, neonate N25.CNhs11196.1351-25D30.00
heart, neonate N30.CNhs11202.1390-42D20.00
hippocampus, adult.CNhs10478.13-16E84.21
hippocampus, neonate N00.CNhs11228.627-43G15.04
intestinal mucosa, adult.CNhs10506.860-29I30.00
intestine, adult.CNhs10496.178-9A30.00
intestine, embryo E12.CNhs11019.1251-16I50.21
intestine, embryo E13.CNhs11010.381-16D50.00
intestine, embryo E15.CNhs10602.976-16D80.00
intestine, embryo E16.CNhs10585.463-22H40.20
intestine, embryo E17.CNhs10582.482-18D30.00
intestine, embryo E18.CNhs10526.1289-20F70.00
intestine, neonate N00.CNhs11126.644-26D10.00
intestine, neonate N01.CNhs11192.1322-23E90.00
intestine, neonate N06.CNhs11102.688-20B80.00
intestine, neonate N07.CNhs11095.720-20F20.00
intestine, neonate N10.CNhs11098.755-23A50.00
intestine, neonate N20.CNhs11187.827-18D10.00
intestine, neonate N25.CNhs11121.1352-25E30.00
intestine, neonate N30.CNhs11131.1384-42G10.00
kidney, embryo E14.CNhs10606.411-4I90.00
kidney, embryo E15.CNhs10997.434-16F80.00
kidney, embryo E16.CNhs10584.464-22A50.00
kidney, embryo E17.CNhs11028.483-18I20.00
kidney, embryo E18.CNhs11001.1288-20C70.00
kidney, neonate N00.CNhs11214.646-21G70.00
kidney, neonate N10.CNhs11206.758-6D50.00
kidney, neonate N20.CNhs11113.832-19I10.00
kidney, neonate N25.CNhs11122.1353-25F30.00
kidney, neonate N30.CNhs11203.1385-42H10.00
liver, adult pregnant day01.CNhs10466.508-5B20.00
liver, embryo E12.CNhs10601.355-15F80.17
liver, embryo E13.CNhs10524.378-3H60.00
liver, embryo E14.CNhs10594.409-16E10.00
liver, embryo E15.CNhs10520.433-16D70.00
liver, embryo E16.CNhs10523.462-17F50.00
liver, embryo E17.CNhs10510.481-18A30.00
liver, embryo E18.CNhs10579.499-43G40.00
liver, neonate N00.CNhs11117.641-24F40.00
liver, neonate N03.CNhs11123.1345-25G20.00
liver, neonate N06.CNhs11101.684-20A80.00
liver, neonate N07.CNhs11103.716-20H20.00
liver, neonate N10.CNhs11115.751-24B90.00
liver, neonate N20.CNhs11220.823-25A30.00
liver, neonate N25.CNhs11198.1368-26H10.00
liver, neonate N30.CNhs11106.1382-42D10.00
lung, adult.CNhs10474.28-22B10.00
lung, embryo E12.CNhs10522.354-16G20.00
lung, embryo E14.CNhs10604.404-26F80.00
lung, embryo E15.CNhs11020.432-17C50.00
lung, embryo E16.CNhs10998.458-17B60.00
lung, embryo E17.CNhs10605.480-44A60.00
lung, embryo E18.CNhs10583.1287-20I60.00
lung, neonate N00.CNhs11224.640-42C60.00
lung, neonate N06.CNhs11212.683-20E50.00
lung, neonate N07.CNhs11111.715-19A30.00
lung, neonate N10.CNhs11219.750-23E60.00
lung, neonate N20.CNhs11109.822-18A40.00
lung, neonate N25.CNhs11119.1359-25C70.00
lung, neonate N30.CNhs11133.1394-42H20.00
macrophage, bone marrow derived, pool1.CNhs11457.3560-170A10.00
macrophage, bone marrow derived, pool2.CNhs11532.3632-171A10.00
mammary gland, adult lactating day02.CNhs10480.595-22B60.00
mammary gland, adult pregnant day19.CNhs10476.588-5H20.00
medulla oblongata, adult.CNhs10477.17-12C24.50
medulla oblongata, neonate N30.CNhs11200.1396-42A33.63
mouse fibroblast cell line: CRL-1658 NIH/3T3.CNhs11093.1830-49C70.00
muscle (biceps femoris), neonate N30.CNhs11129.1389-42C20.00
neurospheres - enteric neuron derived, biol_rep1.CNhs13087.11810-124E10.00
neurospheres - enteric neuron derived, biol_rep2.CNhs13088.11811-124E20.00
neurospheres - enteric neuron derived, biol_rep3.CNhs13089.11812-124E30.00
neurospheres - parasympathetic neuron derived, biol_rep1.CNhs13084.11807-124D70.00
neurospheres - parasympathetic neuron derived, biol_rep2.CNhs13085.11808-124D80.00
neurospheres - parasympathetic neuron derived, biol_rep3.CNhs13086.11809-124D90.00
neurospheres - sympathetic neuron derived, biol_rep1.CNhs13081.11804-124D40.00
neurospheres - sympathetic neuron derived, biol_rep2.CNhs13082.11805-124D50.00
neurospheres - sympathetic neuron derived, biol_rep3.CNhs13083.11806-124D60.00
olfactory brain, adult.CNhs10489.18-22I99.96
ovary, adult.CNhs10507.91-2I70.00
ovary, embryo E18.CNhs11040.505-44H70.00
ovary, neonate N00.CNhs11217.1299-22I40.00
oviduct, adult pregnant day01.CNhs10500.988-6G60.00
pancreas, adult.CNhs10486.34-16E40.00
pancreas, embryo E14.CNhs11012.405-44F40.00
pancreas, embryo E15.CNhs11042.1556-45F20.00
pancreas, embryo E16.CNhs11003.460-26E50.00
pancreas, embryo E17.CNhs10599.1558-45G30.00
pancreas, embryo E18.CNhs10580.1535-43I70.00
pancreas, neonate N00.CNhs11105.645-26G90.00
pancreas, neonate N01.CNhs11138.1531-43D70.00
pancreas, neonate N02.CNhs11139.1539-43D80.00
pancreas, neonate N16.CNhs11136.787-43B60.00
pancreas, neonate N25.CNhs11094.1555-45E20.00
pancreas, neonate N30.CNhs11182.1548-44H50.00
pituitary gland, adult.CNhs10493.21-1G80.34
pituitary gland, embryo E12.CNhs11018.346-16E67.02
pituitary gland, embryo E13.CNhs11009.370-44C72.98
pituitary gland, embryo E14.CNhs11037.398-44A51.93
pituitary gland, embryo E15.CNhs10592.427-16B92.84
pituitary gland, embryo E16.CNhs11036.449-43F60.89
pituitary gland, embryo E17.CNhs11039.1265-44F52.30
pituitary gland, neonate N00.CNhs11190.1308-22E90.00
placenta, adult pregnant day10.CNhs10472.539-13I70.00
placenta, adult pregnant day17.CNhs10464.577-18G30.85
prostate, adult.CNhs10470.859-1F80.00
skin, adult.CNhs10492.30-1C30.16
skin, neonate N00.CNhs11124.650-25G41.29
skin, neonate N03.CNhs11215.662-22H30.84
skin, neonate N06.CNhs11097.693-20I50.36
skin, neonate N10.CNhs11108.762-6C40.16
small intestine, neonate N16.CNhs11114.790-21I10.00
spinal cord, adult.CNhs10505.24-13C94.45
spleen, adult.CNhs10465.25-2G20.00
spleen, embryo E16.CNhs11035.461-43C10.00
spleen, embryo E18.CNhs11011.1271-21F20.00
spleen, neonate N10.CNhs11116.752-24D10.00
spleen, neonate N20.CNhs11112.824-19H10.00
spleen, neonate N25.CNhs11099.1354-25G30.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep1.CNhs12534.12121-128C60.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep2.CNhs12535.12124-128C90.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep3.CNhs12536.12127-128D30.00
stomach, adult.CNhs10503.33-1H60.00
stomach, embryo E12.CNhs10588.356-43E30.47
stomach, embryo E15.CNhs10603.1252-16G80.00
stomach, embryo E16.CNhs11022.459-17D40.00
stomach, embryo E17.CNhs11006.1035-18D50.00
stomach, embryo E18.CNhs10999.1286-20C60.00
stomach, neonate N03.CNhs11193.1340-24B80.00
stomach, neonate N07.CNhs11210.718-18A90.00
stomach, neonate N25.CNhs11104.1355-25E40.00
stomach, neonate N30.CNhs11134.1386-42I10.00
submandibular gland, adult.CNhs10469.59-29C10.00
testis, adult.CNhs10504.57-7G50.00
testis, embryo E13.CNhs11031.389-23F52.09
testis, embryo E15.CNhs11034.443-27C51.16
testis, embryo E16.CNhs11033.470-26G50.19
testis, embryo E17.CNhs11029.486-18I50.00
testis, embryo E18.CNhs11027.503-18G50.00
testis, neonate N00.CNhs11189.1300-22B70.23
testis, neonate N07.CNhs11222.726-26I40.00
testis, neonate N10.CNhs11204.763-44D90.00
testis, neonate N20.CNhs11110.839-18H30.00
testis, neonate N30.CNhs11130.1391-42E20.29
thymus, adult.CNhs10471.38-12B50.00
thymus, embryo E14.CNhs11041.402-44I40.20
thymus, embryo E15.CNhs11005.430-45I20.00
thymus, embryo E16.CNhs11002.456-26C50.00
thymus, embryo E17.CNhs10581.478-18C10.00
thymus, embryo E18.CNhs10595.1273-19G40.00
thymus, neonate N02.CNhs11181.1541-43F80.00
thymus, neonate N03.CNhs11137.2104-43C70.00
thymus, neonate N06.CNhs11197.681-26C40.00
thymus, neonate N07.CNhs11211.713-19D30.00
thymus, neonate N10.CNhs11194.748-24E40.00
thymus, neonate N20.CNhs11186.820-7A20.00
thymus, neonate N25.CNhs11125.1362-25G70.00
thymus, neonate N30.CNhs11132.1393-42G20.00
tongue, adult.CNhs10499.32-1B40.00
trophoblast stem cell line B1 differentiation, day00, biol_rep1.CNhs13526.13297-142H32.44
trophoblast stem cell line R1AB differentiation, day00, biol_rep1.CNhs13481.13283-142F73.59
trophoblast stem cell line Rybp differentiation, day00, biol_rep1.CNhs13519.13290-142G52.35
urinary bladder, adult.CNhs10481.879-12E40.00
uterus, adult pregnant day19.CNhs10497.590-15F50.00
uterus, adult.CNhs10509.92-27E50.00
vagina, adult.CNhs10502.89-27D50.00
vesicular gland, adult.CNhs10491.51-27F80.00
visual cortex - wildtype, neonate N15, donor1.CNhs13031.10235-104A11.13
visual cortex - wildtype, neonate N15, donor2.CNhs13032.10236-104A20.46
visual cortex - wildtype, neonate N15, donor3.CNhs13033.10237-104A30.57
visual cortex - wildtype, neonate N15, donor5.CNhs13820.10349-105D72.23
visual cortex - wildtype, neonate N30, donor1.CNhs13034.10238-104A40.69
visual cortex - wildtype, neonate N30, donor2.CNhs13035.10239-104A50.00
visual cortex - wildtype, neonate N30, donor3.CNhs13036.10240-104A60.00
visual cortex - wildtype, neonate N60-70, donor1.CNhs13037.10241-104A70.45
visual cortex - wildtype, neonate N60-70, donor2.CNhs13038.10242-104A80.45
visual cortex - wildtype, neonate N60-70, donor3.CNhs13039.10243-104A90.52
whole body, embryo E11.CNhs11014.324-5I814.63
whole body, embryo E12.CNhs10587.857-27C913.97
whole body, embryo E13.CNhs10512.372-23H28.20
whole body, embryo E14.5.CNhs10578.420-27D25.35
whole body, embryo E14.CNhs10519.395-14B13.77
whole body, embryo E16.CNhs10514.453-14F22.21
whole body, embryo E17.5, pool1 (internal control).CNhs10479.3139-67G52.22
whole body, embryo E17.5, pool1 (internal control).CNhs10495.3139-67G52.06
whole body, embryo E17.5, pool1 (internal control).CNhs10511.3139-67G52.57
whole body, embryo E17.5, pool1 (internal control).CNhs10527.3139-67G51.52
whole body, embryo E17.5, pool1 (internal control).CNhs10591.3139-67G51.77
whole body, embryo E17.5, pool1 (internal control).CNhs10607.3139-67G52.45
whole body, embryo E17.5, pool1 (internal control).CNhs10623.3139-67G53.00
whole body, embryo E17.5, pool1 (internal control).CNhs10639.3139-67G52.30
whole body, embryo E17.5, pool1 (internal control).CNhs10655.3139-67G52.47
whole body, embryo E17.5, pool1 (internal control).CNhs10725.3139-67G53.33
whole body, embryo E17.5, pool1 (internal control).CNhs10749.3139-67G51.85
whole body, embryo E17.5, pool1 (internal control).CNhs10840.3139-67G51.93
whole body, embryo E17.5, pool1 (internal control).CNhs10856.3139-67G51.24
whole body, embryo E17.5, pool1 (internal control).CNhs10880.3139-67G51.47
whole body, embryo E17.5, pool1 (internal control).CNhs11000.3139-67G51.03
whole body, embryo E17.5, pool1 (internal control).CNhs11024.3139-67G52.31
whole body, embryo E17.5, pool1 (internal control).CNhs11032.3139-67G51.67
whole body, embryo E17.5, pool1 (internal control).CNhs11048.3139-67G52.62
whole body, embryo E17.5, pool1 (internal control).CNhs11072.3139-67G52.26
whole body, embryo E17.5, pool1 (internal control).CNhs11080.3139-67G52.03
whole body, embryo E17.5, pool1 (internal control).CNhs11096.3139-67G51.28
whole body, embryo E17.5, pool1 (internal control).CNhs11120.3139-67G52.89
whole body, embryo E17.5, pool1 (internal control).CNhs11128.3139-67G51.63
whole body, embryo E17.5, pool1 (internal control).CNhs11184.3139-67G50.56
whole body, embryo E17.5, pool1 (internal control).CNhs11208.3139-67G52.02
whole body, embryo E17.5, pool1 (internal control).CNhs11216.3139-67G51.87
whole body, embryo E17.5, pool1 (internal control).CNhs11246.3139-67G51.64
whole body, embryo E17.5, pool1 (internal control).CNhs11278.3139-67G53.10
whole body, embryo E17.5.CNhs10513.490-9F91.54
whole body, embryo E17.CNhs10517.475-3I54.50
whole body, embryo E18.CNhs10516.493-3B32.34
whole body, neonate N00.CNhs10525.657-19C21.29
whole body, neonate N01.CNhs10576.659-23C61.15
whole body, neonate N06.CNhs10515.692-21D10.66
whole body, neonate N10.CNhs10518.761-6B40.46





  • Click each plot point to find sample in table


Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data

Cell type
Ontology termp-valuen
CNS neuron (sensu Vertebrata)1.35e-1523
neuroblast (sensu Vertebrata)1.35e-1523
neural cell6.00e-1243
ectodermal cell1.90e-1144
neurectodermal cell1.90e-1144
neuron1.48e-0833
neuronal stem cell1.48e-0833
neuroblast1.48e-0833
electrically signaling cell1.48e-0833
electrically responsive cell8.27e-0739
electrically active cell8.27e-0739

Uber anatomy
Ontology termp-valuen
neurectoderm2.16e-2164
neural plate2.16e-2164
presumptive neural plate2.16e-2164
central nervous system3.70e-2073
regional part of nervous system6.52e-2054
ectoderm-derived structure8.00e-2095
ectoderm8.00e-2095
presumptive ectoderm8.00e-2095
nervous system3.79e-1975
neural tube3.20e-1852
neural rod3.20e-1852
future spinal cord3.20e-1852
neural keel3.20e-1852
ecto-epithelium1.84e-1773
brain5.27e-1547
future brain5.27e-1547
pre-chordal neural plate1.62e-1449
regional part of brain3.21e-1446
structure with developmental contribution from neural crest1.31e-1092
posterior neural tube2.84e-1012
chordal neural plate2.84e-1012
anterior neural tube4.29e-1040
gray matter4.68e-1034
regional part of forebrain1.71e-0939
forebrain1.71e-0939
future forebrain1.71e-0939
brain grey matter3.68e-0729
regional part of telencephalon3.68e-0729
telencephalon3.68e-0729







Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process. Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process. Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.

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