FFCP PHASE1:Mm9::chrX:73088313..73088332,-: Difference between revisions
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{{FFCP | {{FFCP|EntrezGene=102866|HGNC=|MCL_coexpression_id=72|UniProt=Q3UJG9,Q3UKB1,Q99K51|association_with_transcript=-24bp_to_NM_001166454,uc009tqi.2_5end|description=CAGE_peak_4_at_Pls3_5end|id=chrX:73088313..73088332,-|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019_2=CL:0000680,1.44e-12,6;CL:0000187,1.44e-12,6;CL:0000056,1.44e-12,6;CL:0000222,1.16e-10,7;CL:0000068,2.93e-08,3;CL:0002202,2.93e-08,3;CL:0000069,2.93e-08,3;CL:0002632,2.93e-08,3;CL:0002368,2.93e-08,3;CL:0000307,2.93e-08,3;CL:0000377,2.93e-08,3;CL:0000355,4.06e-08,9;CL:0002494,2.59e-07,3;CL:0000737,2.59e-07,3;CL:0000746,2.59e-07,3;CL:0000513,2.59e-07,3;CL:0000192,7.42e-07,3;CL:0000359,7.42e-07,3;CL:0002539,7.42e-07,3;CL:0000514,7.42e-07,3|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0004535!5.52e-08!23;UBERON:0001009!5.52e-08!23;UBERON:0003103!6.50e-08!43;UBERON:0004872!3.15e-07!33|ontology_enrichment_uberon_v019_2=UBERON:0004535,2.98e-11,23;UBERON:0001009,2.98e-11,23;UBERON:0005178,3.33e-11,17;UBERON:0005181,3.33e-11,17;UBERON:0002224,3.33e-11,17;UBERON:0000915,3.33e-11,17;UBERON:0008947,3.33e-11,17;UBERON:0003258,3.33e-11,17;UBERON:0000383,2.07e-09,10;UBERON:0000947,5.64e-09,4;UBERON:0001637,5.64e-09,4;UBERON:0004573,5.64e-09,4;UBERON:0003509,5.64e-09,4;UBERON:0004571,5.64e-09,4;UBERON:0010191,5.64e-09,4;UBERON:0004572,5.64e-09,4;UBERON:0004872,2.84e-08,33;UBERON:0003126,2.93e-08,3;UBERON:0001005,2.93e-08,3;UBERON:0007196,2.93e-08,3;UBERON:0001558,2.93e-08,3;UBERON:0003103,4.05e-08,43;UBERON:0001134,4.06e-08,9;UBERON:0002036,4.06e-08,9;UBERON:0002385,4.06e-08,9;UBERON:0000486,4.06e-08,9;UBERON:0007503,4.06e-08,9;UBERON:0001015,4.06e-08,9;UBERON:0002329,4.06e-08,9;UBERON:0003082,4.06e-08,9;UBERON:0003059,4.06e-08,9;UBERON:0007282,4.06e-08,9;UBERON:0004290,4.06e-08,9;UBERON:0009618,4.06e-08,9;UBERON:0000055,3.64e-07,5;UBERON:0007500,3.64e-07,5;UBERON:0001981,3.64e-07,5;UBERON:0002049,3.64e-07,5;UBERON:0007798,3.64e-07,5;UBERON:0004537,3.64e-07,5;UBERON:0006965,3.64e-07,5;UBERON:0001135,7.42e-07,3;UBERON:0004237,7.42e-07,3;UBERON:0004695,7.42e-07,3;UBERON:0002111,7.42e-07,3;UBERON:0004178,7.42e-07,3|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.680346321208558,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.6366586336825,1.11514624341466,2.20256102594018,0,0,0,0,0,0,0,0,0,6.17422646486273,1.14613375975503,3.09403255366465,0,0,0,0,0,0,0,0,0,0,0.103689612308478,0,0,0.285650984403804,0,0.122490799214954,0,0,0,0.255374676170375,0.153606533256243,0,0,0,0,0,0.763991238884051,0.294628585473668,0,0,1.21161909333094,1.20914496170857,0.579728977403356,0,0,0,0,0,0.280888840263504,3.74946709671727,3.37721805983729,1.7666978725517,0,0,0,0,12.3399893376392,15.2015919285059,12.1325866803548,0.22836775943812,0,0.742210695324124,0.346970653532272,0,0.461230994512117,0.150722640552623,0.470354828542819,0.376999773989026,0,5.92857363371638,0,0.970601099684455,0,0.484875253135222,0,0,0.209446706813455,0,0,0,0,0.149790639404823,0,0,0.347648640384553,0.255715457330331,0.41557608911912,0.162241263067758,0.203678727700633,1.11966273549084,1.51633655060205,1.05220927943237,0,0,0,0.150704817835715,0.340182495756639,0,0.187403449119458,0,0.215567992932842,0.567318240503458,0.175951124163949,0.219195732427575,0.278047249225598,0.696504333044333,1.02891068203972,0.59710280045548,0,0,0,0,0,0.180062061461015,0,0.393528463494808,0.308534225774757,0.465067889500816,0.268273401399619,0.700592054203017,0.822799249567402,1.97000956894914,1.21603214318784,2.04679982395465,2.41505126820156,2.01309628140558,0,0,0,0,0.213288250535234,0.232236671860439,0.38660238396628,0,0.22237804384487,0,0.949058123089023,0,0,0,0.19496408711912,0,0.432276099749388,0.199141273254367,0,0.228497025219458,0,0,0.387904974335251,0.140271639780637,0.316182685621286,0.738050739898011,1.09899109488962,0.863780147452604,0,0,0,0,0,0,0,0,0,0,0,0.372140947668503,0,0,0.179397413521912,0.482443521363367,1.10851914099963,0.37898282354097,0,0,0,0.335012514883631,0.714130922658041,3.31727201358258,1.10344600874334,0.221464689648775,1.59454768657487,1.80249646187312,1.55416483679306,2.89298117163023,0,0,1.96705709207614,0.551873492609465,0.481651769963376,0.234423373184406,0,1.00988370881749,0.315508219416257,0,0,0,0.222798674082394,0,0.404810701674894,0.876767573733936,0,0.321321316421807,0.567760340833074,0.35613120733451,0.325773918707152,0.989820737835213,0,0,0.604647113929502,0,0.295301892880773,0.614870295887855,1.03371317267288,0.363533729477506,0,0.316036757935816,0,0,0,0.36012218806262,0,0.428674070063185,0,0.178368817602071,0.329098041204242,0.608929898229199,0.704015124191131,0.21183207086382,0.661585194164886,0.98931751764888,1.61464426695906,0.663442174209714,0.716234064018819,1.14898629821543,0.291480836629851,0.556275906031529,0,0.619160603889667,0.185194527369712,0,0,0.228778173206523,0,0,0.138199973804424,0,0.158167996790568,0.203319467126849,1.18805874903981,1.46361807210128,1.09181281873089,1.48350781023303,0.330613822901344,1.57053565190418,0.129614973291793,0,0,0.149516546043979,0.165458490457098,0,0.387479470433193,0.168956125490778,0.234714477291508,0.39061315453185,0.104859344425711,0.241584120826006,0.864090018773596,0,0,0.205421914329655,0,0.179026695667481,0,0.120195449519969,0.147689527174577,0,0.0762068066549998,0,0,0,0,2.26730383615211,0,0,0.167884616364078,0.386379188064381,0.750729901804728,0.73260649706906,7.07415650960917,0.501572104035363,0,0,0,0.171853182343688,0,0,0,0,0.453142408984205,0,0,0,0.341467211508268,0,0.419226325255965,0.183843508450014,0.222246727801615,0.412070114477788,0,0,0,0.754505365544305,0.37456602987953,0.256100609619477,0.34461281373368,0,0.695305955669133,0.38581844092741,0,0.294397840268795,0,0.354951612318675,0.476872379894642,0.290692833264657,0.376437521661322,0.423073039458382,0.182927972872773,0.263069711437843,0,0.561142271657738,0.355905054372522,0.29551344712669,0,0,0,0.249810577937946,0,0.429742108096597,0.191288332068843,0.441182838239031,0|short_description=p4@Pls3}} | ||
|EntrezGene=102866 | |||
|HGNC= | |||
|MCL_coexpression_id=72 | |||
|UniProt=Q3UJG9,Q3UKB1,Q99K51 | |||
|association_with_transcript=-24bp_to_NM_001166454,uc009tqi.2_5end | |||
|description=CAGE_peak_4_at_Pls3_5end | |||
|id=chrX:73088313..73088332,- | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019_2=CL:0000680,1.44e-12,6;CL:0000187,1.44e-12,6;CL:0000056,1.44e-12,6;CL:0000222,1.16e-10,7;CL:0000068,2.93e-08,3;CL:0002202,2.93e-08,3;CL:0000069,2.93e-08,3;CL:0002632,2.93e-08,3;CL:0002368,2.93e-08,3;CL:0000307,2.93e-08,3;CL:0000377,2.93e-08,3;CL:0000355,4.06e-08,9;CL:0002494,2.59e-07,3;CL:0000737,2.59e-07,3;CL:0000746,2.59e-07,3;CL:0000513,2.59e-07,3;CL:0000192,7.42e-07,3;CL:0000359,7.42e-07,3;CL:0002539,7.42e-07,3;CL:0000514,7.42e-07,3 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0004535!5.52e-08!23;UBERON:0001009!5.52e-08!23;UBERON:0003103!6.50e-08!43;UBERON:0004872!3.15e-07!33 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0004535,2.98e-11,23;UBERON:0001009,2.98e-11,23;UBERON:0005178,3.33e-11,17;UBERON:0005181,3.33e-11,17;UBERON:0002224,3.33e-11,17;UBERON:0000915,3.33e-11,17;UBERON:0008947,3.33e-11,17;UBERON:0003258,3.33e-11,17;UBERON:0000383,2.07e-09,10;UBERON:0000947,5.64e-09,4;UBERON:0001637,5.64e-09,4;UBERON:0004573,5.64e-09,4;UBERON:0003509,5.64e-09,4;UBERON:0004571,5.64e-09,4;UBERON:0010191,5.64e-09,4;UBERON:0004572,5.64e-09,4;UBERON:0004872,2.84e-08,33;UBERON:0003126,2.93e-08,3;UBERON:0001005,2.93e-08,3;UBERON:0007196,2.93e-08,3;UBERON:0001558,2.93e-08,3;UBERON:0003103,4.05e-08,43;UBERON:0001134,4.06e-08,9;UBERON:0002036,4.06e-08,9;UBERON:0002385,4.06e-08,9;UBERON:0000486,4.06e-08,9;UBERON:0007503,4.06e-08,9;UBERON:0001015,4.06e-08,9;UBERON:0002329,4.06e-08,9;UBERON:0003082,4.06e-08,9;UBERON:0003059,4.06e-08,9;UBERON:0007282,4.06e-08,9;UBERON:0004290,4.06e-08,9;UBERON:0009618,4.06e-08,9;UBERON:0000055,3.64e-07,5;UBERON:0007500,3.64e-07,5;UBERON:0001981,3.64e-07,5;UBERON:0002049,3.64e-07,5;UBERON:0007798,3.64e-07,5;UBERON:0004537,3.64e-07,5;UBERON:0006965,3.64e-07,5;UBERON:0001135,7.42e-07,3;UBERON:0004237,7.42e-07,3;UBERON:0004695,7.42e-07,3;UBERON:0002111,7.42e-07,3;UBERON:0004178,7.42e-07,3 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.680346321208558,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.6366586336825,1.11514624341466,2.20256102594018,0,0,0,0,0,0,0,0,0,6.17422646486273,1.14613375975503,3.09403255366465,0,0,0,0,0,0,0,0,0,0,0.103689612308478,0,0,0.285650984403804,0,0.122490799214954,0,0,0,0.255374676170375,0.153606533256243,0,0,0,0,0,0.763991238884051,0.294628585473668,0,0,1.21161909333094,1.20914496170857,0.579728977403356,0,0,0,0,0,0.280888840263504,3.74946709671727,3.37721805983729,1.7666978725517,0,0,0,0,12.3399893376392,15.2015919285059,12.1325866803548,0.22836775943812,0,0.742210695324124,0.346970653532272,0,0.461230994512117,0.150722640552623,0.470354828542819,0.376999773989026,0,5.92857363371638,0,0.970601099684455,0,0.484875253135222,0,0,0.209446706813455,0,0,0,0,0.149790639404823,0,0,0.347648640384553,0.255715457330331,0.41557608911912,0.162241263067758,0.203678727700633,1.11966273549084,1.51633655060205,1.05220927943237,0,0,0,0.150704817835715,0.340182495756639,0,0.187403449119458,0,0.215567992932842,0.567318240503458,0.175951124163949,0.219195732427575,0.278047249225598,0.696504333044333,1.02891068203972,0.59710280045548,0,0,0,0,0,0.180062061461015,0,0.393528463494808,0.308534225774757,0.465067889500816,0.268273401399619,0.700592054203017,0.822799249567402,1.97000956894914,1.21603214318784,2.04679982395465,2.41505126820156,2.01309628140558,0,0,0,0,0.213288250535234,0.232236671860439,0.38660238396628,0,0.22237804384487,0,0.949058123089023,0,0,0,0.19496408711912,0,0.432276099749388,0.199141273254367,0,0.228497025219458,0,0,0.387904974335251,0.140271639780637,0.316182685621286,0.738050739898011,1.09899109488962,0.863780147452604,0,0,0,0,0,0,0,0,0,0,0,0.372140947668503,0,0,0.179397413521912,0.482443521363367,1.10851914099963,0.37898282354097,0,0,0,0.335012514883631,0.714130922658041,3.31727201358258,1.10344600874334,0.221464689648775,1.59454768657487,1.80249646187312,1.55416483679306,2.89298117163023,0,0,1.96705709207614,0.551873492609465,0.481651769963376,0.234423373184406,0,1.00988370881749,0.315508219416257,0,0,0,0.222798674082394,0,0.404810701674894,0.876767573733936,0,0.321321316421807,0.567760340833074,0.35613120733451,0.325773918707152,0.989820737835213,0,0,0.604647113929502,0,0.295301892880773,0.614870295887855,1.03371317267288,0.363533729477506,0,0.316036757935816,0,0,0,0.36012218806262,0,0.428674070063185,0,0.178368817602071,0.329098041204242,0.608929898229199,0.704015124191131,0.21183207086382,0.661585194164886,0.98931751764888,1.61464426695906,0.663442174209714,0.716234064018819,1.14898629821543,0.291480836629851,0.556275906031529,0,0.619160603889667,0.185194527369712,0,0,0.228778173206523,0,0,0.138199973804424,0,0.158167996790568,0.203319467126849,1.18805874903981,1.46361807210128,1.09181281873089,1.48350781023303,0.330613822901344,1.57053565190418,0.129614973291793,0,0,0.149516546043979,0.165458490457098,0,0.387479470433193,0.168956125490778,0.234714477291508,0.39061315453185,0.104859344425711,0.241584120826006,0.864090018773596,0,0,0.205421914329655,0,0.179026695667481,0,0.120195449519969,0.147689527174577,0,0.0762068066549998,0,0,0,0,2.26730383615211,0,0,0.167884616364078,0.386379188064381,0.750729901804728,0.73260649706906,7.07415650960917,0.501572104035363,0,0,0,0.171853182343688,0,0,0,0,0.453142408984205,0,0,0,0.341467211508268,0,0.419226325255965,0.183843508450014,0.222246727801615,0.412070114477788,0,0,0,0.754505365544305,0.37456602987953,0.256100609619477,0.34461281373368,0,0.695305955669133,0.38581844092741,0,0.294397840268795,0,0.354951612318675,0.476872379894642,0.290692833264657,0.376437521661322,0.423073039458382,0.182927972872773,0.263069711437843,0,0.561142271657738,0.355905054372522,0.29551344712669,0,0,0,0.249810577937946,0,0.429742108096597,0.191288332068843,0.441182838239031,0 | |||
|short_description=p4@Pls3 | |||
}} |
Revision as of 20:08, 14 September 2013
Short description: | p4@Pls3 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_4_at_Pls3_5end |
Coexpression cluster: | MCL_coexpression_mm9:72 |
Association with transcript: | -24bp_to_NM_001166454, uc009tqi.2_5end |
EntrezGene: | Pls3 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
muscle precursor cell | 1.44e-12 | 6 |
muscle cell | 1.44e-12 | 6 |
myoblast | 1.44e-12 | 6 |
mesodermal cell | 1.16e-10 | 7 |
duct epithelial cell | 2.93e-08 | 3 |
epithelial cell of tracheobronchial tree | 2.93e-08 | 3 |
branched duct epithelial cell | 2.93e-08 | 3 |
epithelial cell of lower respiratory tract | 2.93e-08 | 3 |
respiratory epithelial cell | 2.93e-08 | 3 |
tracheal epithelial cell | 2.93e-08 | 3 |
tracheoblast | 2.93e-08 | 3 |
multi-potent skeletal muscle stem cell | 4.06e-08 | 9 |
cardiocyte | 2.59e-07 | 3 |
striated muscle cell | 2.59e-07 | 3 |
cardiac muscle cell | 2.59e-07 | 3 |
cardiac muscle myoblast | 2.59e-07 | 3 |
smooth muscle cell | 7.42e-07 | 3 |
vascular associated smooth muscle cell | 7.42e-07 | 3 |
aortic smooth muscle cell | 7.42e-07 | 3 |
smooth muscle myoblast | 7.42e-07 | 3 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.