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FFCP PHASE1:Mm9::chrX:96086252..96086330,-: Difference between revisions

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{{FFCP
{{FFCP|EntrezGene=94190|HGNC=|UniProt=Q99J31,B1AV64,B1AV63,Q8BQX4|association_with_transcript=0bp_to_ENSMUST00000033560,ENSMUST00000142267,ENSMUST00000147805,NM_052976,uc009tuy.1,uc009tuz.1,uc009tvb.1,uc012hmn.1_5end|description=CAGE_peak_1_at_Ophn1_5end|id=chrX:96086252..96086330,-|ontology_enrichment_celltype=CL:0000117!3.61e-07!23;CL:0000337!3.61e-07!23|ontology_enrichment_celltype_v019_2=CL:0000117,3.37e-07,23;CL:0000337,3.37e-07,23|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0000033!2.95e-13!63;UBERON:0004121!2.99e-13!102;UBERON:0000924!2.99e-13!102;UBERON:0006601!2.99e-13!102;UBERON:0003056!1.61e-11!49;UBERON:0002346!3.00e-11!71;UBERON:0003075!3.00e-11!71;UBERON:0007284!3.00e-11!71;UBERON:0000468!3.88e-11!333;UBERON:0001049!1.38e-10!52;UBERON:0005068!1.38e-10!52;UBERON:0006241!1.38e-10!52;UBERON:0007135!1.38e-10!52;UBERON:0001017!8.35e-10!73;UBERON:0005743!8.35e-10!73;UBERON:0000955!1.33e-09!50;UBERON:0006238!1.33e-09!50;UBERON:0000073!1.41e-09!75;UBERON:0001016!1.41e-09!75;UBERON:0002616!3.41e-09!49;UBERON:0003080!1.91e-08!40;UBERON:0002780!6.60e-08!39;UBERON:0001890!6.60e-08!39;UBERON:0006240!6.60e-08!39;UBERON:0000922!1.01e-07!328;UBERON:0002020!4.34e-07!34|ontology_enrichment_uberon_v019_2=UBERON:0010371,3.56e-16,73;UBERON:0004121,1.00e-14,95;UBERON:0000924,1.00e-14,95;UBERON:0006601,1.00e-14,95;UBERON:0002346,3.66e-13,64;UBERON:0003075,3.66e-13,64;UBERON:0007284,3.66e-13,64;UBERON:0003056,2.03e-11,49;UBERON:0001049,1.84e-10,52;UBERON:0005068,1.84e-10,52;UBERON:0006241,1.84e-10,52;UBERON:0007135,1.84e-10,52;UBERON:0000073,3.39e-10,54;UBERON:0001017,1.29e-09,73;UBERON:0000955,2.15e-09,47;UBERON:0006238,2.15e-09,47;UBERON:0001016,2.16e-09,75;UBERON:0002616,5.55e-09,46;UBERON:0010314,1.19e-08,92;UBERON:0003080,2.42e-08,40;UBERON:0002780,8.35e-08,39;UBERON:0001890,8.35e-08,39;UBERON:0006240,8.35e-08,39;UBERON:0000922,1.76e-07,320;UBERON:0002020,5.54e-07,34|phase1_expression=5.76535849577258,2.44282785347553,2.27499619694768,7.86406949397758,9.01612313903425,1.6787927191189,2.33612640595526,0,0,0,0,0,0,0,0.333109761815663,0.202475267389826,0,0,0.137114433605739,0,2.63634199468316,0,0.261199789138935,2.23989391910769,1.60586496747019,1.14846392823004,1.29228598847722,1.72376986148711,4.94060890586572,1.51218077855958,1.33038306393183,0.635030673459631,1.23012957516914,0,2.88851619751275,2.82598897109437,4.08338712524738,0,0.7813353445238,1.57057123192139,0,0.683045484958446,0,2.26614272356039,1.62203089951223,3.30384153891027,2.34717403304412,0.436050312760893,0.659058548203415,0.58328969722285,0.839918529752175,1.43752564364972,0,0,0,2.82985379639542,2.29226751951005,1.03134418455488,7.89034197352431,8.46385566835253,8.87363964908651,1.0165335962074,0,2.6996991518442,3.9554654502679,3.5524005747305,2.09720077362883,2.30530983192933,6.84351441235953,6.61529097825284,6.73039876324422,5.42736870367227,5.52171352379034,6.49201235839256,5.94241920313065,5.51531271966013,5.50579404996943,2.93680877595932,5.52983519722476,8.30883612700221,6.86157327018072,6.25096044668112,4.74611098302348,6.75315132038016,5.80633341551878,5.00868595305235,8.39992916714707,5.77838282058432,2.65041676666144,4.53429360640713,1.15945795480671,0,0,0.539703191637817,0,0.448026887097336,1.68533304158102,2.55645483867087,2.33807404142582,4.94675404314476,4.78867627240714,1.28326477414318,0,0,1.73192832808971,2.28023878927589,1.01104889002957,1.37020655662872,2.84831672011889,3.85949561568544,4.16364784238726,2.43572382649713,1.61430848079241,2.71300752994721,2.93971767839262,1.88499886994513,0.247194967734374,5.35017620603673,0.884610551949874,3.23533699894818,3.97514733228708,3.87900202508178,5.59175283654366,16.6885054296582,12.7762491156208,5.10914110417183,0.718890747035522,0,0.635351135365324,13.481157546434,8.6925114535539,6.15706325353036,9.03886464999838,7.92717917724025,7.68815764870372,9.40999325792994,6.11036183101898,5.349499736234,1.76905930903572,3.57751155007006,6.76626303406059,6.66716102857071,7.92273371143537,7.08312643827861,7.89223390155403,8.07116437794554,7.21503279109912,6.46758426847539,4.31135985865684,7.18603104637713,7.9178005873777,5.04150184583422,9.17555922444473,6.61679116392116,8.23128545631774,2.9855140022774,1.40442637462647,0.257347907114715,2.55747149456033,3.52113813310353,4.69052119962192,3.24111710629827,4.02466050494857,3.54175617145327,2.93107514486019,2.32533944750408,3.21928081679543,1.98501082024188,2.79751744852917,3.77585167381919,3.64809642956351,3.50879969820798,1.75640092232841,4.83143107537338,7.36014819974445,5.9684675179985,14.2080076683033,6.08236303326152,4.26576501070468,6.73486348395272,2.31961430379768,2.62188582010345,3.7804267453628,1.71203063501303,3.79623249235609,2.79988223030818,2.5133520880027,4.17808591286417,4.48417400373976,2.69645822596266,4.97117514711797,6.37252074413975,3.79335801906163,4.79843752960861,10.1436962105772,5.09128319613286,5.23671715352589,3.50679099451593,5.6280518040589,3.24742325555125,2.35498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|EntrezGene=94190
|HGNC=
|UniProt=Q99J31,B1AV64,B1AV63,Q8BQX4
|association_with_transcript=0bp_to_ENSMUST00000033560,ENSMUST00000142267,ENSMUST00000147805,NM_052976,uc009tuy.1,uc009tuz.1,uc009tvb.1,uc012hmn.1_5end
|description=CAGE_peak_1_at_Ophn1_5end
|id=chrX:96086252..96086330,-
|ontology_enrichment_celltype=CL:0000117!3.61e-07!23;CL:0000337!3.61e-07!23
|ontology_enrichment_celltype_v019_2=CL:0000117,3.37e-07,23;CL:0000337,3.37e-07,23
|ontology_enrichment_disease=
|ontology_enrichment_disease_v019_2=
|ontology_enrichment_uberon=UBERON:0000033!2.95e-13!63;UBERON:0004121!2.99e-13!102;UBERON:0000924!2.99e-13!102;UBERON:0006601!2.99e-13!102;UBERON:0003056!1.61e-11!49;UBERON:0002346!3.00e-11!71;UBERON:0003075!3.00e-11!71;UBERON:0007284!3.00e-11!71;UBERON:0000468!3.88e-11!333;UBERON:0001049!1.38e-10!52;UBERON:0005068!1.38e-10!52;UBERON:0006241!1.38e-10!52;UBERON:0007135!1.38e-10!52;UBERON:0001017!8.35e-10!73;UBERON:0005743!8.35e-10!73;UBERON:0000955!1.33e-09!50;UBERON:0006238!1.33e-09!50;UBERON:0000073!1.41e-09!75;UBERON:0001016!1.41e-09!75;UBERON:0002616!3.41e-09!49;UBERON:0003080!1.91e-08!40;UBERON:0002780!6.60e-08!39;UBERON:0001890!6.60e-08!39;UBERON:0006240!6.60e-08!39;UBERON:0000922!1.01e-07!328;UBERON:0002020!4.34e-07!34
|ontology_enrichment_uberon_v019_2=UBERON:0010371,3.56e-16,73;UBERON:0004121,1.00e-14,95;UBERON:0000924,1.00e-14,95;UBERON:0006601,1.00e-14,95;UBERON:0002346,3.66e-13,64;UBERON:0003075,3.66e-13,64;UBERON:0007284,3.66e-13,64;UBERON:0003056,2.03e-11,49;UBERON:0001049,1.84e-10,52;UBERON:0005068,1.84e-10,52;UBERON:0006241,1.84e-10,52;UBERON:0007135,1.84e-10,52;UBERON:0000073,3.39e-10,54;UBERON:0001017,1.29e-09,73;UBERON:0000955,2.15e-09,47;UBERON:0006238,2.15e-09,47;UBERON:0001016,2.16e-09,75;UBERON:0002616,5.55e-09,46;UBERON:0010314,1.19e-08,92;UBERON:0003080,2.42e-08,40;UBERON:0002780,8.35e-08,39;UBERON:0001890,8.35e-08,39;UBERON:0006240,8.35e-08,39;UBERON:0000922,1.76e-07,320;UBERON:0002020,5.54e-07,34
|phase1_expression=5.76535849577258,2.44282785347553,2.27499619694768,7.86406949397758,9.01612313903425,1.6787927191189,2.33612640595526,0,0,0,0,0,0,0,0.333109761815663,0.202475267389826,0,0,0.137114433605739,0,2.63634199468316,0,0.261199789138935,2.23989391910769,1.60586496747019,1.14846392823004,1.29228598847722,1.72376986148711,4.94060890586572,1.51218077855958,1.33038306393183,0.635030673459631,1.23012957516914,0,2.88851619751275,2.82598897109437,4.08338712524738,0,0.7813353445238,1.57057123192139,0,0.683045484958446,0,2.26614272356039,1.62203089951223,3.30384153891027,2.34717403304412,0.436050312760893,0.659058548203415,0.58328969722285,0.839918529752175,1.43752564364972,0,0,0,2.82985379639542,2.29226751951005,1.03134418455488,7.89034197352431,8.46385566835253,8.87363964908651,1.0165335962074,0,2.6996991518442,3.9554654502679,3.5524005747305,2.09720077362883,2.30530983192933,6.84351441235953,6.61529097825284,6.73039876324422,5.42736870367227,5.52171352379034,6.49201235839256,5.94241920313065,5.51531271966013,5.50579404996943,2.93680877595932,5.52983519722476,8.30883612700221,6.86157327018072,6.25096044668112,4.74611098302348,6.75315132038016,5.80633341551878,5.00868595305235,8.39992916714707,5.77838282058432,2.65041676666144,4.53429360640713,1.15945795480671,0,0,0.539703191637817,0,0.448026887097336,1.68533304158102,2.55645483867087,2.33807404142582,4.94675404314476,4.78867627240714,1.28326477414318,0,0,1.73192832808971,2.28023878927589,1.01104889002957,1.37020655662872,2.84831672011889,3.85949561568544,4.16364784238726,2.43572382649713,1.61430848079241,2.71300752994721,2.93971767839262,1.88499886994513,0.247194967734374,5.35017620603673,0.884610551949874,3.23533699894818,3.97514733228708,3.87900202508178,5.59175283654366,16.6885054296582,12.7762491156208,5.10914110417183,0.718890747035522,0,0.635351135365324,13.481157546434,8.6925114535539,6.15706325353036,9.03886464999838,7.92717917724025,7.68815764870372,9.40999325792994,6.11036183101898,5.349499736234,1.76905930903572,3.57751155007006,6.76626303406059,6.66716102857071,7.92273371143537,7.08312643827861,7.89223390155403,8.07116437794554,7.21503279109912,6.46758426847539,4.31135985865684,7.18603104637713,7.9178005873777,5.04150184583422,9.17555922444473,6.61679116392116,8.23128545631774,2.9855140022774,1.40442637462647,0.257347907114715,2.55747149456033,3.52113813310353,4.69052119962192,3.24111710629827,4.02466050494857,3.54175617145327,2.93107514486019,2.32533944750408,3.21928081679543,1.98501082024188,2.79751744852917,3.77585167381919,3.64809642956351,3.50879969820798,1.75640092232841,4.83143107537338,7.36014819974445,5.9684675179985,14.2080076683033,6.08236303326152,4.26576501070468,6.73486348395272,2.31961430379768,2.62188582010345,3.7804267453628,1.71203063501303,3.79623249235609,2.79988223030818,2.5133520880027,4.17808591286417,4.48417400373976,2.69645822596266,4.97117514711797,6.37252074413975,3.79335801906163,4.79843752960861,10.1436962105772,5.09128319613286,5.23671715352589,3.50679099451593,5.6280518040589,3.24742325555125,2.35498091762062,2.22114895059241,0.889357881261447,0.667380422864376,2.35870794135844,1.34917267430912,2.02860121388503,0.241177159752417,1.52775511068852,4.02774592431135,2.59416362840057,2.19649130550465,4.31304619582064,3.72140947668503,3.43241440426017,2.27320990152401,2.33216637578486,1.4473305640901,6.28160846566456,3.41084541186873,6.02970412835496,5.26209765903083,5.63256595892405,9.88286918906713,6.66522194480839,4.87834119644497,10.4039195110086,4.65075848262427,5.26200736569707,4.91589944147214,4.31712454664739,4.77341893318988,13.5712155545345,3.26343410291226,3.93411418415229,4.13905119457099,7.86697890940181,5.74337264301796,4.09837363441689,3.28212205365685,3.47059041357882,1.95219372148319,5.60100834105277,2.62865677747807,4.23317480756549,4.24614796183249,2.83367491172426,3.50707029493574,4.74345333535828,7.39039027770156,7.52282451603824,4.45164009168138,5.21238269931443,7.09371528781903,2.65490276679926,4.12727081463468,2.72091201268276,3.20628635585027,2.06711325016541,2.76691633149535,2.32585463851399,4.72593848320757,4.9909632973861,2.84433082142234,2.10837217149998,1.03135543248187,6.46835250932197,7.0223826672211,5.04498866752743,4.92975180572662,6.56158864476412,6.24290861607247,4.27827453565514,2.43571959291679,1.64270195644597,0.21183207086382,1.7642271844397,12.2015827176695,9.36493674836252,8.7453741145826,11.4597450243011,17.8913580722117,6.99554007911642,6.67531087237835,0.854354403989263,3.92135049130123,2.22233432843654,1.88368457004691,0.546776910884101,0.457556346413045,1.69978429993855,0.839708713941948,0.829199842826543,1.90934123603023,3.16335993581135,4.67634774391752,4.75223499615926,3.3454127362315,3.49380101993884,4.98998081623837,6.52962300230154,4.18809507174447,5.31421390496351,4.34937519160848,0.56369293868419,4.78452947340732,2.81279433777066,4.66682852025714,2.45403664607689,5.57555214119568,5.16371850041317,7.68205870579306,5.7672639434141,1.93267296660805,0.864090018773596,0,1.41907650703115,1.54066435747241,0.909445760844565,0.179026695667481,0.198681354781265,0.360586348559907,0.443068581523732,0.504832249740738,0.533447646584999,0.100826185136841,0.584747284438515,0.384847366561318,0.701261413089414,6.12172035761071,0.221985953374065,0,0,5.40930863290133,4.129014459926,4.76194223094889,9.4322086794789,2.50786052017682,7.34177395402186,6.44455331110048,6.30185064783336,4.1244763762485,8.90607275701835,4.5323633843382,5.40018000185445,3.60256962579376,3.17199686288943,4.65984280576638,4.67043064128795,8.77854721482268,5.63420898988643,5.10524105843418,4.61148957781561,4.59608771125035,5.778414922842,8.03536723231687,3.53011130550997,5.55933865880354,7.60437899670719,7.73367999682912,6.55490552289177,5.89031402124797,5.22662767496081,3.81034953026459,5.44656331940821,5.01563973205633,5.35711671044299,5.88795680537589,6.51451579532289,4.79184676630211,4.76872379894642,4.79643174886684,6.11710972699649,6.00763716030903,5.67076715905595,5.26139422875686,4.48153575691344,6.73370725989286,4.50813068871862,5.51625101303155,5.32000356120596,5.88759996506671,6.55882477335881,9.74261253957989,6.08222181958062,7.30561583764214,5.92993829413414,5.7353768971074,4.17362104116759
|short_description=p1@Ophn1
}}

Revision as of 20:18, 14 September 2013

Short description:p1@Ophn1
Species:Mouse (Mus musculus)
DPI dataset: NA
TSS-like-by-RIKEN-classifier(Yes/No): NA
DHS support(Yes/No): NA
Description: CAGE_peak_1_at_Ophn1_5end
Coexpression cluster:NA
Association with transcript: 0bp_to_ENSMUST00000033560, ENSMUST00000142267, ENSMUST00000147805, NM_052976, uc009tuy.1, uc009tuz.1, uc009tvb.1, uc012hmn.1_5end
EntrezGene:Ophn1
Link to Zenbu:ZENBU


View on UCSC genome browser

Mouse over to see Genome browser image, Click image to go to Genome browser


CAGE Expression

Sample

p1@Ophn1

Atoh1+ Inner ear hair cells - organ of corti, pool1.CNhs12533.12158-128G75.77
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13242.11850-124I52.44
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13233.11851-124I62.27
CD326+ enterocyte, pool1.CNhs13542.11848-124I37.86
CD326+ enterocyte, pool2.CNhs13197.11849-124I49.02
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13236.11852-124I71.68
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13210.11853-124I82.34
CD4+CD25+ regulatory T cells, pool2 (Balb_cAJcl).CNhs13221.11818-124E90.00
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool1 (C57BL_6J).CNhs13219.11816-124E70.00
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool2 (Balb_cAJcl).CNhs13226.11820-124F20.00
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool1 (C57BL_6J).CNhs13218.11815-124E60.00
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool2 (Balb_cAJcl).CNhs13225.11819-124F10.00
CD4+CD25-CD44- naive conventional T cells, pool1 (C57BL_6J).CNhs13217.11813-124E40.00
CD4+CD25-CD44- naive conventional T cells, pool2 (Balb_cAJcl).CNhs13220.11817-124E80.00
CD41+ megakaryocyte cancer, donor1.CNhs13079.11774-124A10.33
CD41+ megakaryocyte cancer, donor2.CNhs13213.11776-124A30.20
CD41+ megakaryocyte cancer, donor3.CNhs13506.11778-124A50.00
CD41+ megakaryocyte control, donor1.CNhs13212.11775-124A20.00
CD41+ megakaryocyte control, donor2.CNhs13214.11777-124A40.14
CD41+ megakaryocyte control, donor3.CNhs13201.11779-124A60.00
Clontech Mouse Universal Reference Total RNA, pool1.CNhs10609.10001-101A32.64
EBF KO HPCs induced to T cell, 00hr00min, biol_rep1.CNhs11058.12972-138H20.00
EBF KO HPCs induced to T cell, 00hr00min, biol_rep2.CNhs12980.12988-138I90.26
Follicle Associated Epithelium, pool2.CNhs13211.10262-104D12.24
Follicle Associated Epithelium, pool3.CNhs13200.10263-104D21.61
GP2+ M cell, pool1.CNhs13228.11845-124H91.15
GP2+ M cell, pool2.CNhs13231.11846-124I11.29
GP2+ M cell, pool3.CNhs13240.11847-124I21.72
Ileum epithelium, pool1.CNhs13199.10252-104B94.94
Ileum epithelium, pool2.CNhs13232.10253-104C11.51
Ileum epithelium, treated with RANKL, day03, pool3.CNhs13234.10260-104C81.33
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep1.CNhs12449.13063-139I30.64
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep2.CNhs12668.13129-140G61.23
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep3.CNhs12770.13195-141E90.00
Lgr5 positive intestinal stem cells, pool1.CNhs12555.12228-129F52.89
Lgr5 positive intestinal stem cells, pool2.CNhs12556.12229-129F62.83
Lgr5 positive intestinal stem cells, pool3.CNhs12557.12230-129F74.08
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor1 (10,11,12 3LL).CNhs12539.12159-128G80.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor2 (0127 3LL).CNhs12198.12161-128H10.78
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor3 (0128 3LL).CNhs12542.12163-128H31.57
MC1+Gr1+ myeloid-derived suppressor cells control, donor1 (4,5,6PBS).CNhs12540.12160-128G90.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor2 (0127 PBS).CNhs12541.12162-128H20.68
MC1+Gr1+ myeloid-derived suppressor cells control, donor3 (0128 PBS).CNhs12543.12164-128H40.00
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep1.CNhs11055.11484-119D82.27
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep2.CNhs11056.11485-119D91.62
Mouse Aortic Smooth Muscle cells, donor1.CNhs11297.11299-117B33.30
Mouse Astrocytes - cerebellar, donor1.CNhs13077.11708-123B72.35
Mouse Astrocytes - cerebellar, donor2.CNhs12076.11550-120C20.44
Mouse Astrocytes - hippocampus, donor1.CNhs12129.11709-123B80.66
Mouse Astrocytes - hippocampus, donor2.CNhs12077.11551-120C30.58
Mouse Astrocytes, donor2.CNhs12078.11552-120C40.84
Mouse Astrocytes, donor3.CNhs12107.11633-122C41.44
Mouse CD19+ B Cells, donor1.CNhs13531.11856-125A20.00
Mouse CD4+ T Cells, donor1.CNhs13509.11854-124I90.00
Mouse CD8+ T Cells, donor1.CNhs13511.11855-125A10.00
Mouse Cardiac Myocytes, donor1.CNhs12355.11711-123C12.83
Mouse Cardiac Myocytes, donor2.CNhs12356.11729-123E12.29
Mouse Cardiac Myocytes, donor3.CNhs12353.11634-122C51.03
Mouse Granule cells, donor1.CNhs12131.11713-123C37.89
Mouse Granule cells, donor2.CNhs12357.11731-123E38.46
Mouse Granule cells, donor3.CNhs12108.11636-122C78.87
Mouse Meningeal cells, donor1.CNhs12132.11716-123C61.02
Mouse Meningeal cells, donor3.CNhs12109.11639-122D10.00
Mouse Mesenchymal stem cells - bone marrow derived, donor1.CNhs12628.11717-123C72.70
Mouse Mesenchymal stem cells - bone marrow derived, donor2.CNhs12633.11735-123E73.96
Mouse Mesenchymal stem cells - bone marrow derived, donor3.CNhs12616.11640-122D23.55
Mouse Microglia, donor1.CNhs12629.11718-123C82.10
Mouse Microglia, donor2.CNhs12634.11736-123E82.31
Mouse Neurons - cortical, donor1.CNhs12025.11724-123D56.84
Mouse Neurons - cortical, donor2.CNhs11947.11742-123F56.62
Mouse Neurons - cortical, donor3.CNhs12112.11647-122D96.73
Mouse Neurons - dorsal spinal cord, donor2.CNhs12635.11738-123F15.43
Mouse Neurons - dorsal spinal cord, donor3.CNhs12618.11643-122D55.52
Mouse Neurons - hippocampal, donor1.CNhs12133.11721-123D26.49
Mouse Neurons - hippocampal, donor2.CNhs12359.11739-123F25.94
Mouse Neurons - hippocampal, donor3.CNhs12110.11644-122D65.52
Mouse Neurons - raphe, donor1.CNhs12631.11722-123D35.51
Mouse Neurons - raphe, donor2.CNhs12636.11740-123F32.94
Mouse Neurons - raphe, donor3.CNhs12619.11645-122D75.53
Mouse Neurons - striatal, donor1.CNhs12134.11723-123D48.31
Mouse Neurons - striatal, donor2.CNhs12360.11741-123F46.86
Mouse Neurons - striatal, donor3.CNhs12111.11646-122D86.25
Mouse Neurons - substantia nigra, donor4, tech_rep1.CNhs12612.11489-119E44.75
Mouse Neurons - substantia nigra, donor5.CNhs12614.11490-119E56.75
Mouse Neurons - substantia nigra, donor6.CNhs12643.11770-123I65.81
Mouse Neurons - ventral spinal cord, donor1.CNhs12632.11725-123D65.01
Mouse Neurons - ventral spinal cord, donor2.CNhs12638.11743-123F68.40
Mouse Neurons - ventral spinal cord, donor3.CNhs12113.11648-122E15.78
Mouse Schwann, donor1.CNhs12507.11728-123D92.65
Mouse Schwann, donor2.CNhs12573.11746-123F94.53
Mouse hepatic Sinusoidal Endothelial Cells, donor1.CNhs13209.11830-124G31.16
Mouse hepatic Stellate Cells (lipocyte), donor1.CNhs13196.11825-124F70.00
Mouse hepatocyte, donor1.CNhs13078.11714-123C40.00
Mouse hepatocyte, donor3.CNhs12615.11637-122C80.54
Mouse hepatocyte, donor6.CNhs13090.11822-124F40.00
Mouse hepatocyte, donor8.CNhs13091.11824-124F60.45
SABiosciences XpressRef Mouse Universal Total RNA, pool1.CNhs10611.10003-101A71.69
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep1 (000hC4).CNhs11939.12338-130I72.56
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep2 (000hC5).CNhs13275.12460-132E32.34
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep3 (000hC6).CNhs13324.12582-133I84.95
Sox2+ Supporting cells - organ of corti, pool1.CNhs12532.12157-128G64.79
TSt-4/DLL1 feeder cells, biol_rep1.CNhs13407.12971-138H11.28
TSt-4/DLL1 feeder cells, biol_rep2.CNhs13408.12987-138I80.00
TSt-4/DLL1 feeder cells, biol_rep3.CNhs13409.13003-139B60.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep1.CNhs13739.13367-143G11.73
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep2.CNhs13740.13368-143G22.28
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep3.CNhs13741.13369-143G31.01
Universal RNA - Mouse Normal Tissues Biochain, pool1.CNhs10613.10008-101B61.37
accessory axillary lymph node, adult.CNhs10475.1063-29H92.85
adrenal gland, adult.CNhs10508.49-24D73.86
adrenal gland, embryo E14.CNhs11038.406-44C54.16
adrenal gland, embryo E16.CNhs11004.1254-43D62.44
adrenal gland, embryo E17.CNhs11043.1263-45I11.61
adrenal gland, embryo E18.CNhs11026.1262-18F52.71
adrenal gland, neonate N00.CNhs11191.1311-23C12.94
adrenal gland, neonate N25.CNhs11223.1377-27I31.88
amnion, adult pregnant day17.5.CNhs10488.583-22A80.25
aorta, adult.CNhs10498.46-23H15.35
bone (os femoris), adult.CNhs10483.56-12G20.88
bone (os femoris), neonate N02.CNhs11227.1985-43F53.24
bone (os femoris), neonate N16.CNhs11225.1525-43A63.98
bone (os femoris), neonate N20.CNhs11195.1350-25C33.88
cecum, adult.CNhs10467.37-13H45.59
cerebellum, adult.CNhs10494.15-8B216.69
cerebellum, neonate N30.CNhs11135.1395-42I212.78
colon, adult.CNhs10468.36-18H75.11
common myeloid progenitor CMP, biol_rep1.CNhs12550.12122-128C70.72
common myeloid progenitor CMP, biol_rep2.CNhs12203.12125-128D10.00
common myeloid progenitor CMP, biol_rep3.CNhs12551.12128-128D40.64
corpora quadrigemina, adult.CNhs10501.16-22A413.48
corpus striatum, adult.CNhs10487.19-21D88.69
corpus striatum, neonate N00.CNhs11226.630-43F16.16
cortex, adult.CNhs10473.12-14D59.04
cortex, neonate N30.CNhs11107.1392-42F27.93
diencephalon, adult.CNhs10482.20-12F27.69
diencephalon, neonate N30.CNhs11201.1388-42B29.41
epididymis and seminiferous tubule, neonate N00.CNhs11218.1310-23B16.11
epididymis and seminiferous tubule, neonate N30.CNhs11199.1387-42A25.35
epididymis, adult.CNhs10490.58-23B21.77
eyeball, adult.CNhs10484.31-12G43.58
eyeball, embryo E12.CNhs11016.345-16C66.77
eyeball, embryo E14.CNhs10521.399-16E26.67
eyeball, embryo E15.CNhs10593.426-16C97.92
eyeball, embryo E17.CNhs11023.1261-18D47.08
eyeball, neonate N00.CNhs11207.633-15C67.89
eyeball, neonate N01.CNhs11140.1532-43E78.07
eyeball, neonate N02.CNhs11205.1551-44G87.22
eyeball, neonate N16.CNhs11188.777-19A26.47
forelimb, embryo E11.CNhs10596.335-25E24.31
forelimb, embryo E12.CNhs10600.359-14H27.19
forelimb, embryo E13.CNhs10589.384-1E27.92
forelimb, embryo E14.CNhs10577.413-26A85.04
forelimb, embryo E15.CNhs11007.437-20E79.18
forelimb, embryo E17.CNhs10598.1517-43C46.62
forelimb, embryo E18.CNhs11008.1520-43B58.23
gonad, embryo E13.CNhs11044.1564-45I62.99
granulocyte macrophage progenitor GMP, biol_rep1.CNhs12206.12123-128C81.40
granulocyte macrophage progenitor GMP, biol_rep2.CNhs12202.12126-128D20.26
granulocyte macrophage progenitor GMP, biol_rep3.CNhs11928.12129-128D52.56
heart, embryo E11.CNhs10586.331-24E93.52
heart, embryo E12.CNhs11015.353-12F54.69
heart, embryo E13.CNhs11013.376-3I93.24
heart, embryo E14.CNhs10597.403-26D44.02
heart, embryo E15.CNhs11017.431-16C83.54
heart, embryo E16.CNhs11021.457-17C62.93
heart, embryo E17.CNhs11025.479-18E52.33
heart, embryo E18.CNhs11030.1283-20G33.22
heart, neonate N00.CNhs11213.639-21E31.99
heart, neonate N03.CNhs11221.1349-25I22.80
heart, neonate N10.CNhs11118.749-24G13.78
heart, neonate N16.CNhs11209.782-15G13.65
heart, neonate N20.CNhs11127.821-26I63.51
heart, neonate N25.CNhs11196.1351-25D31.76
heart, neonate N30.CNhs11202.1390-42D24.83
hippocampus, adult.CNhs10478.13-16E87.36
hippocampus, neonate N00.CNhs11228.627-43G15.97
intestinal mucosa, adult.CNhs10506.860-29I314.21
intestine, adult.CNhs10496.178-9A36.08
intestine, embryo E12.CNhs11019.1251-16I54.27
intestine, embryo E13.CNhs11010.381-16D56.73
intestine, embryo E15.CNhs10602.976-16D82.32
intestine, embryo E16.CNhs10585.463-22H42.62
intestine, embryo E17.CNhs10582.482-18D33.78
intestine, embryo E18.CNhs10526.1289-20F71.71
intestine, neonate N00.CNhs11126.644-26D13.80
intestine, neonate N01.CNhs11192.1322-23E92.80
intestine, neonate N06.CNhs11102.688-20B82.51
intestine, neonate N07.CNhs11095.720-20F24.18
intestine, neonate N10.CNhs11098.755-23A54.48
intestine, neonate N20.CNhs11187.827-18D12.70
intestine, neonate N25.CNhs11121.1352-25E34.97
intestine, neonate N30.CNhs11131.1384-42G16.37
kidney, embryo E14.CNhs10606.411-4I93.79
kidney, embryo E15.CNhs10997.434-16F84.80
kidney, embryo E16.CNhs10584.464-22A510.14
kidney, embryo E17.CNhs11028.483-18I25.09
kidney, embryo E18.CNhs11001.1288-20C75.24
kidney, neonate N00.CNhs11214.646-21G73.51
kidney, neonate N10.CNhs11206.758-6D55.63
kidney, neonate N20.CNhs11113.832-19I13.25
kidney, neonate N25.CNhs11122.1353-25F32.35
kidney, neonate N30.CNhs11203.1385-42H12.22
liver, adult pregnant day01.CNhs10466.508-5B20.89
liver, embryo E12.CNhs10601.355-15F80.67
liver, embryo E13.CNhs10524.378-3H62.36
liver, embryo E14.CNhs10594.409-16E11.35
liver, embryo E15.CNhs10520.433-16D72.03
liver, embryo E16.CNhs10523.462-17F50.24
liver, embryo E17.CNhs10510.481-18A31.53
liver, embryo E18.CNhs10579.499-43G44.03
liver, neonate N00.CNhs11117.641-24F42.59
liver, neonate N03.CNhs11123.1345-25G22.20
liver, neonate N06.CNhs11101.684-20A84.31
liver, neonate N07.CNhs11103.716-20H23.72
liver, neonate N10.CNhs11115.751-24B93.43
liver, neonate N20.CNhs11220.823-25A32.27
liver, neonate N25.CNhs11198.1368-26H12.33
liver, neonate N30.CNhs11106.1382-42D11.45
lung, adult.CNhs10474.28-22B16.28
lung, embryo E12.CNhs10522.354-16G23.41
lung, embryo E14.CNhs10604.404-26F86.03
lung, embryo E15.CNhs11020.432-17C55.26
lung, embryo E16.CNhs10998.458-17B65.63
lung, embryo E17.CNhs10605.480-44A69.88
lung, embryo E18.CNhs10583.1287-20I66.67
lung, neonate N00.CNhs11224.640-42C64.88
lung, neonate N06.CNhs11212.683-20E510.40
lung, neonate N07.CNhs11111.715-19A34.65
lung, neonate N10.CNhs11219.750-23E65.26
lung, neonate N20.CNhs11109.822-18A44.92
lung, neonate N25.CNhs11119.1359-25C74.32
lung, neonate N30.CNhs11133.1394-42H24.77
macrophage, bone marrow derived, pool1.CNhs11457.3560-170A113.57
macrophage, bone marrow derived, pool2.CNhs11532.3632-171A13.26
mammary gland, adult lactating day02.CNhs10480.595-22B63.93
mammary gland, adult pregnant day19.CNhs10476.588-5H24.14
medulla oblongata, adult.CNhs10477.17-12C27.87
medulla oblongata, neonate N30.CNhs11200.1396-42A35.74
mouse fibroblast cell line: CRL-1658 NIH/3T3.CNhs11093.1830-49C74.10
muscle (biceps femoris), neonate N30.CNhs11129.1389-42C23.28
neurospheres - enteric neuron derived, biol_rep1.CNhs13087.11810-124E13.47
neurospheres - enteric neuron derived, biol_rep2.CNhs13088.11811-124E21.95
neurospheres - enteric neuron derived, biol_rep3.CNhs13089.11812-124E35.60
neurospheres - parasympathetic neuron derived, biol_rep1.CNhs13084.11807-124D72.63
neurospheres - parasympathetic neuron derived, biol_rep2.CNhs13085.11808-124D84.23
neurospheres - parasympathetic neuron derived, biol_rep3.CNhs13086.11809-124D94.25
neurospheres - sympathetic neuron derived, biol_rep1.CNhs13081.11804-124D42.83
neurospheres - sympathetic neuron derived, biol_rep2.CNhs13082.11805-124D53.51
neurospheres - sympathetic neuron derived, biol_rep3.CNhs13083.11806-124D64.74
olfactory brain, adult.CNhs10489.18-22I97.39
ovary, adult.CNhs10507.91-2I77.52
ovary, embryo E18.CNhs11040.505-44H74.45
ovary, neonate N00.CNhs11217.1299-22I45.21
oviduct, adult pregnant day01.CNhs10500.988-6G67.09
pancreas, adult.CNhs10486.34-16E42.65
pancreas, embryo E14.CNhs11012.405-44F44.13
pancreas, embryo E15.CNhs11042.1556-45F22.72
pancreas, embryo E16.CNhs11003.460-26E53.21
pancreas, embryo E17.CNhs10599.1558-45G32.07
pancreas, embryo E18.CNhs10580.1535-43I72.77
pancreas, neonate N00.CNhs11105.645-26G92.33
pancreas, neonate N01.CNhs11138.1531-43D74.73
pancreas, neonate N02.CNhs11139.1539-43D84.99
pancreas, neonate N16.CNhs11136.787-43B62.84
pancreas, neonate N25.CNhs11094.1555-45E22.11
pancreas, neonate N30.CNhs11182.1548-44H51.03
pituitary gland, adult.CNhs10493.21-1G86.47
pituitary gland, embryo E12.CNhs11018.346-16E67.02
pituitary gland, embryo E13.CNhs11009.370-44C75.04
pituitary gland, embryo E14.CNhs11037.398-44A54.93
pituitary gland, embryo E15.CNhs10592.427-16B96.56
pituitary gland, embryo E16.CNhs11036.449-43F66.24
pituitary gland, embryo E17.CNhs11039.1265-44F54.28
pituitary gland, neonate N00.CNhs11190.1308-22E92.44
placenta, adult pregnant day10.CNhs10472.539-13I71.64
placenta, adult pregnant day17.CNhs10464.577-18G30.21
prostate, adult.CNhs10470.859-1F81.76
skin, adult.CNhs10492.30-1C312.20
skin, neonate N00.CNhs11124.650-25G49.36
skin, neonate N03.CNhs11215.662-22H38.75
skin, neonate N06.CNhs11097.693-20I511.46
skin, neonate N10.CNhs11108.762-6C417.89
small intestine, neonate N16.CNhs11114.790-21I17.00
spinal cord, adult.CNhs10505.24-13C96.68
spleen, adult.CNhs10465.25-2G20.85
spleen, embryo E16.CNhs11035.461-43C13.92
spleen, embryo E18.CNhs11011.1271-21F22.22
spleen, neonate N10.CNhs11116.752-24D11.88
spleen, neonate N20.CNhs11112.824-19H10.55
spleen, neonate N25.CNhs11099.1354-25G30.46
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep1.CNhs12534.12121-128C61.70
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep2.CNhs12535.12124-128C90.84
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep3.CNhs12536.12127-128D30.83
stomach, adult.CNhs10503.33-1H61.91
stomach, embryo E12.CNhs10588.356-43E33.16
stomach, embryo E15.CNhs10603.1252-16G84.68
stomach, embryo E16.CNhs11022.459-17D44.75
stomach, embryo E17.CNhs11006.1035-18D53.35
stomach, embryo E18.CNhs10999.1286-20C63.49
stomach, neonate N03.CNhs11193.1340-24B84.99
stomach, neonate N07.CNhs11210.718-18A96.53
stomach, neonate N25.CNhs11104.1355-25E44.19
stomach, neonate N30.CNhs11134.1386-42I15.31
submandibular gland, adult.CNhs10469.59-29C14.35
testis, adult.CNhs10504.57-7G50.56
testis, embryo E13.CNhs11031.389-23F54.78
testis, embryo E15.CNhs11034.443-27C52.81
testis, embryo E16.CNhs11033.470-26G54.67
testis, embryo E17.CNhs11029.486-18I52.45
testis, embryo E18.CNhs11027.503-18G55.58
testis, neonate N00.CNhs11189.1300-22B75.16
testis, neonate N07.CNhs11222.726-26I47.68
testis, neonate N10.CNhs11204.763-44D95.77
testis, neonate N20.CNhs11110.839-18H31.93
testis, neonate N30.CNhs11130.1391-42E20.86
thymus, adult.CNhs10471.38-12B50.00
thymus, embryo E14.CNhs11041.402-44I41.42
thymus, embryo E15.CNhs11005.430-45I21.54
thymus, embryo E16.CNhs11002.456-26C50.91
thymus, embryo E17.CNhs10581.478-18C10.18
thymus, embryo E18.CNhs10595.1273-19G40.20
thymus, neonate N02.CNhs11181.1541-43F80.36
thymus, neonate N03.CNhs11137.2104-43C70.44
thymus, neonate N06.CNhs11197.681-26C40.50
thymus, neonate N07.CNhs11211.713-19D30.53
thymus, neonate N10.CNhs11194.748-24E40.10
thymus, neonate N20.CNhs11186.820-7A20.58
thymus, neonate N25.CNhs11125.1362-25G70.38
thymus, neonate N30.CNhs11132.1393-42G20.70
tongue, adult.CNhs10499.32-1B46.12
trophoblast stem cell line B1 differentiation, day00, biol_rep1.CNhs13526.13297-142H30.22
trophoblast stem cell line R1AB differentiation, day00, biol_rep1.CNhs13481.13283-142F70.00
trophoblast stem cell line Rybp differentiation, day00, biol_rep1.CNhs13519.13290-142G50.00
urinary bladder, adult.CNhs10481.879-12E45.41
uterus, adult pregnant day19.CNhs10497.590-15F54.13
uterus, adult.CNhs10509.92-27E54.76
vagina, adult.CNhs10502.89-27D59.43
vesicular gland, adult.CNhs10491.51-27F82.51
visual cortex - wildtype, neonate N15, donor1.CNhs13031.10235-104A17.34
visual cortex - wildtype, neonate N15, donor2.CNhs13032.10236-104A26.44
visual cortex - wildtype, neonate N15, donor3.CNhs13033.10237-104A36.30
visual cortex - wildtype, neonate N15, donor5.CNhs13820.10349-105D74.12
visual cortex - wildtype, neonate N30, donor1.CNhs13034.10238-104A48.91
visual cortex - wildtype, neonate N30, donor2.CNhs13035.10239-104A54.53
visual cortex - wildtype, neonate N30, donor3.CNhs13036.10240-104A65.40
visual cortex - wildtype, neonate N60-70, donor1.CNhs13037.10241-104A73.60
visual cortex - wildtype, neonate N60-70, donor2.CNhs13038.10242-104A83.17
visual cortex - wildtype, neonate N60-70, donor3.CNhs13039.10243-104A94.66
whole body, embryo E11.CNhs11014.324-5I84.67
whole body, embryo E12.CNhs10587.857-27C98.78
whole body, embryo E13.CNhs10512.372-23H25.63
whole body, embryo E14.5.CNhs10578.420-27D25.11
whole body, embryo E14.CNhs10519.395-14B14.61
whole body, embryo E16.CNhs10514.453-14F24.60
whole body, embryo E17.5, pool1 (internal control).CNhs10479.3139-67G55.78
whole body, embryo E17.5, pool1 (internal control).CNhs10495.3139-67G58.04
whole body, embryo E17.5, pool1 (internal control).CNhs10511.3139-67G53.53
whole body, embryo E17.5, pool1 (internal control).CNhs10527.3139-67G55.56
whole body, embryo E17.5, pool1 (internal control).CNhs10591.3139-67G57.60
whole body, embryo E17.5, pool1 (internal control).CNhs10607.3139-67G57.73
whole body, embryo E17.5, pool1 (internal control).CNhs10623.3139-67G56.55
whole body, embryo E17.5, pool1 (internal control).CNhs10639.3139-67G55.89
whole body, embryo E17.5, pool1 (internal control).CNhs10655.3139-67G55.23
whole body, embryo E17.5, pool1 (internal control).CNhs10725.3139-67G53.81
whole body, embryo E17.5, pool1 (internal control).CNhs10749.3139-67G55.45
whole body, embryo E17.5, pool1 (internal control).CNhs10840.3139-67G55.02
whole body, embryo E17.5, pool1 (internal control).CNhs10856.3139-67G55.36
whole body, embryo E17.5, pool1 (internal control).CNhs10880.3139-67G55.89
whole body, embryo E17.5, pool1 (internal control).CNhs11000.3139-67G56.51
whole body, embryo E17.5, pool1 (internal control).CNhs11024.3139-67G54.79
whole body, embryo E17.5, pool1 (internal control).CNhs11032.3139-67G54.77
whole body, embryo E17.5, pool1 (internal control).CNhs11048.3139-67G54.80
whole body, embryo E17.5, pool1 (internal control).CNhs11072.3139-67G56.12
whole body, embryo E17.5, pool1 (internal control).CNhs11080.3139-67G56.01
whole body, embryo E17.5, pool1 (internal control).CNhs11096.3139-67G55.67
whole body, embryo E17.5, pool1 (internal control).CNhs11120.3139-67G55.26
whole body, embryo E17.5, pool1 (internal control).CNhs11128.3139-67G54.48
whole body, embryo E17.5, pool1 (internal control).CNhs11184.3139-67G56.73
whole body, embryo E17.5, pool1 (internal control).CNhs11208.3139-67G54.51
whole body, embryo E17.5, pool1 (internal control).CNhs11216.3139-67G55.52
whole body, embryo E17.5, pool1 (internal control).CNhs11246.3139-67G55.32
whole body, embryo E17.5, pool1 (internal control).CNhs11278.3139-67G55.89
whole body, embryo E17.5.CNhs10513.490-9F96.56
whole body, embryo E17.CNhs10517.475-3I59.74
whole body, embryo E18.CNhs10516.493-3B36.08
whole body, neonate N00.CNhs10525.657-19C27.31
whole body, neonate N01.CNhs10576.659-23C65.93
whole body, neonate N06.CNhs10515.692-21D15.74
whole body, neonate N10.CNhs10518.761-6B44.17





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Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data

Cell type
Ontology termp-valuen
CNS neuron (sensu Vertebrata)3.37e-0723
neuroblast (sensu Vertebrata)3.37e-0723







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