FFCP PHASE1:Mm9::chrX:98460079..98460088,-: Difference between revisions
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{{FFCP | {{FFCP|EntrezGene=NA|HGNC=|MCL_coexpression_id=532|UniProt=NA|association_with_transcript=NA|description=CAGE_peak_at_chrX:98460079..98460088,-|id=chrX:98460079..98460088,-|ontology_enrichment_celltype=CL:0000738!5.42e-15!17;CL:0002087!5.42e-15!17;CL:0002031!8.43e-15!25;CL:0000838!1.90e-14!12;CL:0000084!2.30e-13!11;CL:0000827!2.30e-13!11;CL:0000542!5.31e-13!13;CL:0000051!5.31e-13!13;CL:0000988!1.35e-12!32;CL:0002032!1.35e-12!32;CL:0000037!1.35e-12!32;CL:0000566!1.35e-12!32;CL:0000837!1.35e-12!32;CL:0000791!1.05e-11!9;CL:0000789!1.05e-11!9;CL:0002420!1.05e-11!9;CL:0002419!1.05e-11!9;CL:0000790!1.05e-11!9;CL:0000624!1.31e-10!8;CL:0002320!1.07e-09!46;CL:0000134!1.07e-09!46;CL:0000893!2.04e-08!6;CL:0002489!2.04e-08!6;CL:0000898!2.04e-08!6;CL:0000809!2.04e-08!6;CL:0000810!2.04e-08!6;CL:0000895!2.04e-08!6;CL:0000808!2.04e-08!6;CL:0000894!2.04e-08!6;CL:0000806!2.04e-08!6;CL:0000807!2.04e-08!6;CL:0000805!2.04e-08!6;CL:0002425!2.04e-08!6;CL:0002436!2.04e-08!6;CL:0002427!2.04e-08!6;CL:0002428!2.04e-08!6;CL:0002429!2.04e-08!6;CL:0002433!2.04e-08!6;CL:0002431!2.04e-08!6;CL:0002432!2.04e-08!6;CL:0000219!1.05e-07!54|ontology_enrichment_celltype_v019_2=CL:0000791,8.83e-37,9;CL:0000789,8.83e-37,9;CL:0002420,8.83e-37,9;CL:0002419,8.83e-37,9;CL:0000790,8.83e-37,9;CL:0002031,4.59e-35,25;CL:0000738,4.76e-34,17;CL:0002087,4.76e-34,17;CL:0000838,1.58e-33,12;CL:0000624,5.82e-33,8;CL:0000542,7.84e-31,13;CL:0000051,7.84e-31,13;CL:0000084,7.31e-30,11;CL:0000827,7.31e-30,11;CL:0000988,7.73e-27,32;CL:0002032,7.73e-27,32;CL:0000037,7.73e-27,32;CL:0000837,7.73e-27,32;CL:0002320,2.82e-26,46;CL:0000134,2.82e-26,46;CL:0000893,2.48e-25,6;CL:0002489,2.48e-25,6;CL:0000898,2.48e-25,6;CL:0000809,2.48e-25,6;CL:0000810,2.48e-25,6;CL:0000895,2.48e-25,6;CL:0000808,2.48e-25,6;CL:0000894,2.48e-25,6;CL:0000806,2.48e-25,6;CL:0000807,2.48e-25,6;CL:0000805,2.48e-25,6;CL:0002425,2.48e-25,6;CL:0002436,2.48e-25,6;CL:0002427,2.48e-25,6;CL:0002428,2.48e-25,6;CL:0002429,2.48e-25,6;CL:0002433,2.48e-25,6;CL:0002431,2.48e-25,6;CL:0002432,2.48e-25,6;CL:0000219,6.06e-22,54;CL:0002092,1.55e-12,3;CL:0002540,1.55e-12,3;CL:0000034,2.88e-12,97;CL:0000723,8.92e-12,91;CL:0000048,8.92e-12,91;CL:0002476,5.74e-10,2;CL:0000839,8.76e-08,13|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0002193!9.11e-23!48;UBERON:0002390!5.97e-22!45;UBERON:0003061!5.97e-22!45;UBERON:0003081!2.44e-17!88;UBERON:0004177!9.89e-17!29;UBERON:0002370!1.35e-14!23;UBERON:0000974!1.35e-14!23;UBERON:0004807!1.35e-14!23;UBERON:0005058!1.35e-14!23;UBERON:0003351!1.35e-14!23;UBERON:0009113!1.35e-14!23;UBERON:0003295!1.35e-14!23;UBERON:0009722!1.35e-14!23;UBERON:0005562!1.35e-14!23;UBERON:0007690!1.35e-14!23;UBERON:0006562!1.04e-13!24;UBERON:0003408!1.04e-13!24;UBERON:0001557!1.04e-13!24;UBERON:0001042!1.04e-13!24;UBERON:0008814!1.04e-13!24;UBERON:0009145!1.04e-13!24;UBERON:0002405!1.52e-13!70;UBERON:0000072!1.83e-11!27;UBERON:0002384!1.07e-09!46;UBERON:0000065!1.15e-08!41;UBERON:0000063!2.30e-08!35;UBERON:0001004!2.70e-08!42;UBERON:0005057!1.01e-07!51|ontology_enrichment_uberon_v019_2=UBERON:0002384,2.82e-26,46;UBERON:0002193,6.67e-22,48;UBERON:0002405,6.67e-22,48;UBERON:0002390,1.20e-20,45;UBERON:0003061,1.20e-20,45;UBERON:0002371,3.05e-15,16;UBERON:0001474,8.52e-11,22;UBERON:0004765,8.52e-11,22;UBERON:0001434,8.52e-11,22;UBERON:0002370,1.72e-10,23;UBERON:0000974,1.72e-10,23;UBERON:0004807,1.72e-10,23;UBERON:0005058,1.72e-10,23;UBERON:0003351,1.72e-10,23;UBERON:0009113,1.72e-10,23;UBERON:0003295,1.72e-10,23;UBERON:0009722,1.72e-10,23;UBERON:0005562,1.72e-10,23;UBERON:0007690,1.72e-10,23;UBERON:0006562,5.22e-10,24;UBERON:0003408,5.22e-10,24;UBERON:0001557,5.22e-10,24;UBERON:0001042,5.22e-10,24;UBERON:0008814,5.22e-10,24;UBERON:0009145,5.22e-10,24;UBERON:0003081,2.52e-09,87;UBERON:0000072,8.95e-09,27;UBERON:0004177,4.30e-08,29;UBERON:0005057,4.30e-08,29;UBERON:0002204,4.38e-07,32|phase1_expression=0,0,0,0,0,0,0,4.13194635013044,9.43284438416167,7.49006484230379,6.50628279256919,5.02564601670619,2.73921167889929,3.93391810885488,0,0.607425802169478,0,1.26184866143295,1.50825876966313,2.12194825899015,0.0850432901510698,0.595745707205312,0.783599367416806,0.159992422793407,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.251793635951155,0.405507724878058,0.183546752161682,0,0,0,0,0,0,2.18117387875057,2.17608642603403,3.36093799142464,0.514518872071894,0,0,0,0.528990979272033,0,0,0,1.3498495759221,3.9554654502679,1.4209602298922,0,0.768436610643109,0,0,0,0,0,0,0.0958454710182364,0,0,0,0,0,0,0,0,0,0,0.294628585473668,0,0,0.075726193333184,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.6251303710604,0,0.173485326766136,0,0,0,0,0,0,0.144599356919912,0.884610551949874,0,0,0,0,0,0,0.255457055208591,0.239630249011841,0,0.889491589511453,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0680364991513279,0,0,0,0,0,0,0,0,0,0.205782136407943,0,0,0,0,0,0,0,0,0,0,0,0,0.233530684734339,0,0,0.243206428637567,0.146199987425332,0,0.134206418760372,0,0,0,0,0,0,0.128867461322093,0,0,0,0,0,0,0,0,0,0,0,0.189667900953082,0,0,0,0.193952487167626,0,0,0,0,0.123397163921801,0,0,0.196558995113203,0,0,0,0,0,0.324270453550071,0,0,0,0,0,0,0,0.369506380333209,0,0,0,0,0,0,0.195133647857799,0.157635144106191,0.44292937929755,0,0,0,0,12.0633027151418,14.1415477792864,0,0.275936746304732,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.283880170416537,0,0,0,0,0,0,0.188605079755898,0,0,0.258428293168221,0,0,0,0,0,0,0,0,0,0,0,0,0,0.469343416127421,0.42366414172764,0,0,0.161464426695906,0,0.119372344003136,0,0,0,0.170870880797853,0.206386867963223,0,0.188368457004691,0.27338845544205,0.457556346413045,1.01987057996313,0.839708713941948,0.829199842826543,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.168956125490778,0,0,0,0,0,0.316011120628178,0,0.308132871494482,0.649604114888975,0.179026695667481,0.79472541912506,1.08175904567972,1.03382669022204,0.706765149637033,0.838274873204998,0.806609481094724,0.487289403698762,0.769694733122636,0.935015217452552,0,0.443971906748129,0,0.167884616364078,0,0.563047426353546,0,0.214368379079066,0.501572104035363,0.564751842617067,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0936415074698824,0,0,0,0,0,0,0,0,0.177475806159338,0,0,0.0941093804153306,0,0,0,0,0,0,0,0,0,0.192906610981141,0,0,0,0,0,0|short_description=p@chrX:98460079..98460088,-}} | ||
|EntrezGene=NA | |||
|HGNC= | |||
|MCL_coexpression_id=532 | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|description=CAGE_peak_at_chrX:98460079..98460088,- | |||
|id=chrX:98460079..98460088,- | |||
|ontology_enrichment_celltype=CL:0000738!5.42e-15!17;CL:0002087!5.42e-15!17;CL:0002031!8.43e-15!25;CL:0000838!1.90e-14!12;CL:0000084!2.30e-13!11;CL:0000827!2.30e-13!11;CL:0000542!5.31e-13!13;CL:0000051!5.31e-13!13;CL:0000988!1.35e-12!32;CL:0002032!1.35e-12!32;CL:0000037!1.35e-12!32;CL:0000566!1.35e-12!32;CL:0000837!1.35e-12!32;CL:0000791!1.05e-11!9;CL:0000789!1.05e-11!9;CL:0002420!1.05e-11!9;CL:0002419!1.05e-11!9;CL:0000790!1.05e-11!9;CL:0000624!1.31e-10!8;CL:0002320!1.07e-09!46;CL:0000134!1.07e-09!46;CL:0000893!2.04e-08!6;CL:0002489!2.04e-08!6;CL:0000898!2.04e-08!6;CL:0000809!2.04e-08!6;CL:0000810!2.04e-08!6;CL:0000895!2.04e-08!6;CL:0000808!2.04e-08!6;CL:0000894!2.04e-08!6;CL:0000806!2.04e-08!6;CL:0000807!2.04e-08!6;CL:0000805!2.04e-08!6;CL:0002425!2.04e-08!6;CL:0002436!2.04e-08!6;CL:0002427!2.04e-08!6;CL:0002428!2.04e-08!6;CL:0002429!2.04e-08!6;CL:0002433!2.04e-08!6;CL:0002431!2.04e-08!6;CL:0002432!2.04e-08!6;CL:0000219!1.05e-07!54 | |||
|ontology_enrichment_celltype_v019_2=CL:0000791,8.83e-37,9;CL:0000789,8.83e-37,9;CL:0002420,8.83e-37,9;CL:0002419,8.83e-37,9;CL:0000790,8.83e-37,9;CL:0002031,4.59e-35,25;CL:0000738,4.76e-34,17;CL:0002087,4.76e-34,17;CL:0000838,1.58e-33,12;CL:0000624,5.82e-33,8;CL:0000542,7.84e-31,13;CL:0000051,7.84e-31,13;CL:0000084,7.31e-30,11;CL:0000827,7.31e-30,11;CL:0000988,7.73e-27,32;CL:0002032,7.73e-27,32;CL:0000037,7.73e-27,32;CL:0000837,7.73e-27,32;CL:0002320,2.82e-26,46;CL:0000134,2.82e-26,46;CL:0000893,2.48e-25,6;CL:0002489,2.48e-25,6;CL:0000898,2.48e-25,6;CL:0000809,2.48e-25,6;CL:0000810,2.48e-25,6;CL:0000895,2.48e-25,6;CL:0000808,2.48e-25,6;CL:0000894,2.48e-25,6;CL:0000806,2.48e-25,6;CL:0000807,2.48e-25,6;CL:0000805,2.48e-25,6;CL:0002425,2.48e-25,6;CL:0002436,2.48e-25,6;CL:0002427,2.48e-25,6;CL:0002428,2.48e-25,6;CL:0002429,2.48e-25,6;CL:0002433,2.48e-25,6;CL:0002431,2.48e-25,6;CL:0002432,2.48e-25,6;CL:0000219,6.06e-22,54;CL:0002092,1.55e-12,3;CL:0002540,1.55e-12,3;CL:0000034,2.88e-12,97;CL:0000723,8.92e-12,91;CL:0000048,8.92e-12,91;CL:0002476,5.74e-10,2;CL:0000839,8.76e-08,13 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002193!9.11e-23!48;UBERON:0002390!5.97e-22!45;UBERON:0003061!5.97e-22!45;UBERON:0003081!2.44e-17!88;UBERON:0004177!9.89e-17!29;UBERON:0002370!1.35e-14!23;UBERON:0000974!1.35e-14!23;UBERON:0004807!1.35e-14!23;UBERON:0005058!1.35e-14!23;UBERON:0003351!1.35e-14!23;UBERON:0009113!1.35e-14!23;UBERON:0003295!1.35e-14!23;UBERON:0009722!1.35e-14!23;UBERON:0005562!1.35e-14!23;UBERON:0007690!1.35e-14!23;UBERON:0006562!1.04e-13!24;UBERON:0003408!1.04e-13!24;UBERON:0001557!1.04e-13!24;UBERON:0001042!1.04e-13!24;UBERON:0008814!1.04e-13!24;UBERON:0009145!1.04e-13!24;UBERON:0002405!1.52e-13!70;UBERON:0000072!1.83e-11!27;UBERON:0002384!1.07e-09!46;UBERON:0000065!1.15e-08!41;UBERON:0000063!2.30e-08!35;UBERON:0001004!2.70e-08!42;UBERON:0005057!1.01e-07!51 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002384,2.82e-26,46;UBERON:0002193,6.67e-22,48;UBERON:0002405,6.67e-22,48;UBERON:0002390,1.20e-20,45;UBERON:0003061,1.20e-20,45;UBERON:0002371,3.05e-15,16;UBERON:0001474,8.52e-11,22;UBERON:0004765,8.52e-11,22;UBERON:0001434,8.52e-11,22;UBERON:0002370,1.72e-10,23;UBERON:0000974,1.72e-10,23;UBERON:0004807,1.72e-10,23;UBERON:0005058,1.72e-10,23;UBERON:0003351,1.72e-10,23;UBERON:0009113,1.72e-10,23;UBERON:0003295,1.72e-10,23;UBERON:0009722,1.72e-10,23;UBERON:0005562,1.72e-10,23;UBERON:0007690,1.72e-10,23;UBERON:0006562,5.22e-10,24;UBERON:0003408,5.22e-10,24;UBERON:0001557,5.22e-10,24;UBERON:0001042,5.22e-10,24;UBERON:0008814,5.22e-10,24;UBERON:0009145,5.22e-10,24;UBERON:0003081,2.52e-09,87;UBERON:0000072,8.95e-09,27;UBERON:0004177,4.30e-08,29;UBERON:0005057,4.30e-08,29;UBERON:0002204,4.38e-07,32 | |||
|phase1_expression=0,0,0,0,0,0,0,4.13194635013044,9.43284438416167,7.49006484230379,6.50628279256919,5.02564601670619,2.73921167889929,3.93391810885488,0,0.607425802169478,0,1.26184866143295,1.50825876966313,2.12194825899015,0.0850432901510698,0.595745707205312,0.783599367416806,0.159992422793407,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.251793635951155,0.405507724878058,0.183546752161682,0,0,0,0,0,0,2.18117387875057,2.17608642603403,3.36093799142464,0.514518872071894,0,0,0,0.528990979272033,0,0,0,1.3498495759221,3.9554654502679,1.4209602298922,0,0.768436610643109,0,0,0,0,0,0,0.0958454710182364,0,0,0,0,0,0,0,0,0,0,0.294628585473668,0,0,0.075726193333184,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.6251303710604,0,0.173485326766136,0,0,0,0,0,0,0.144599356919912,0.884610551949874,0,0,0,0,0,0,0.255457055208591,0.239630249011841,0,0.889491589511453,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0680364991513279,0,0,0,0,0,0,0,0,0,0.205782136407943,0,0,0,0,0,0,0,0,0,0,0,0,0.233530684734339,0,0,0.243206428637567,0.146199987425332,0,0.134206418760372,0,0,0,0,0,0,0.128867461322093,0,0,0,0,0,0,0,0,0,0,0,0.189667900953082,0,0,0,0.193952487167626,0,0,0,0,0.123397163921801,0,0,0.196558995113203,0,0,0,0,0,0.324270453550071,0,0,0,0,0,0,0,0.369506380333209,0,0,0,0,0,0,0.195133647857799,0.157635144106191,0.44292937929755,0,0,0,0,12.0633027151418,14.1415477792864,0,0.275936746304732,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.283880170416537,0,0,0,0,0,0,0.188605079755898,0,0,0.258428293168221,0,0,0,0,0,0,0,0,0,0,0,0,0,0.469343416127421,0.42366414172764,0,0,0.161464426695906,0,0.119372344003136,0,0,0,0.170870880797853,0.206386867963223,0,0.188368457004691,0.27338845544205,0.457556346413045,1.01987057996313,0.839708713941948,0.829199842826543,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.168956125490778,0,0,0,0,0,0.316011120628178,0,0.308132871494482,0.649604114888975,0.179026695667481,0.79472541912506,1.08175904567972,1.03382669022204,0.706765149637033,0.838274873204998,0.806609481094724,0.487289403698762,0.769694733122636,0.935015217452552,0,0.443971906748129,0,0.167884616364078,0,0.563047426353546,0,0.214368379079066,0.501572104035363,0.564751842617067,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0936415074698824,0,0,0,0,0,0,0,0,0.177475806159338,0,0,0.0941093804153306,0,0,0,0,0,0,0,0,0,0.192906610981141,0,0,0,0,0,0 | |||
|short_description=p@chrX:98460079..98460088,- | |||
}} |
Revision as of 20:19, 14 September 2013
Short description: | p@chrX:98460079..98460088, - |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chrX:98460079..98460088, - |
Coexpression cluster: | MCL_coexpression_mm9:532 |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
connective tissue | 2.82e-26 | 46 |
hemolymphoid system | 6.67e-22 | 48 |
immune system | 6.67e-22 | 48 |
hematopoietic system | 1.20e-20 | 45 |
blood island | 1.20e-20 | 45 |
bone marrow | 3.05e-15 | 16 |
bone element | 8.52e-11 | 22 |
skeletal element | 8.52e-11 | 22 |
skeletal system | 8.52e-11 | 22 |
thymus | 1.72e-10 | 23 |
neck | 1.72e-10 | 23 |
respiratory system epithelium | 1.72e-10 | 23 |
hemolymphoid system gland | 1.72e-10 | 23 |
pharyngeal epithelium | 1.72e-10 | 23 |
thymic region | 1.72e-10 | 23 |
pharyngeal gland | 1.72e-10 | 23 |
entire pharyngeal arch endoderm | 1.72e-10 | 23 |
thymus primordium | 1.72e-10 | 23 |
early pharyngeal endoderm | 1.72e-10 | 23 |
pharynx | 5.22e-10 | 24 |
gland of gut | 5.22e-10 | 24 |
upper respiratory tract | 5.22e-10 | 24 |
chordate pharynx | 5.22e-10 | 24 |
pharyngeal arch system | 5.22e-10 | 24 |
pharyngeal region of foregut | 5.22e-10 | 24 |
lateral plate mesoderm | 2.52e-09 | 87 |
segment of respiratory tract | 8.95e-09 | 27 |
hemopoietic organ | 4.30e-08 | 29 |
immune organ | 4.30e-08 | 29 |
musculoskeletal system | 4.38e-07 | 32 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
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Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.