FFCP PHASE1:Hg19::chr10:104405760..104405771,-: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |||
|TSSclassifier=not | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|description=CAGE_peak_at_chr10:104405760..104405771,- | |||
|id=chr10:104405760..104405771,- | |||
|ontology_enrichment_celltype=CL:0002057!3.04e-25!42;CL:0000860!4.56e-24!45;CL:0000766!6.03e-21!76;CL:0000839!7.38e-18!70;CL:0002194!8.32e-18!63;CL:0000576!8.32e-18!63;CL:0000040!8.32e-18!63;CL:0000559!8.32e-18!63;CL:0002009!6.99e-17!65;CL:0000738!9.22e-16!140;CL:0000557!2.41e-15!71;CL:0002087!6.35e-14!119;CL:0002031!3.45e-13!124;CL:0000763!4.32e-13!112;CL:0000049!4.32e-13!112;CL:0000037!4.78e-13!172;CL:0000566!4.78e-13!172;CL:0002393!2.33e-12!9;CL:0002397!2.33e-12!9;CL:0000988!6.27e-12!182;CL:0002032!1.69e-11!165;CL:0000837!1.69e-11!165;CL:0000134!9.59e-10!358;CL:0002320!1.66e-09!365;CL:0000219!4.91e-08!390;CL:0000048!2.15e-07!430;CL:0000723!3.12e-07!436;CL:0000034!5.06e-07!444 | |||
|ontology_enrichment_celltype_v019=CL:0000094;2.19e-17;8!CL:0002393;5.98e-13;6!CL:0002397;5.98e-13;6!CL:0000081;1.06e-12;11!CL:0000766;1.24e-12;69!CL:0000775;1.32e-12;3!CL:0000576;3.00e-10;48!CL:0000860;1.09e-08;33!CL:0002057;1.09e-08;33 | |||
|ontology_enrichment_celltype_v019_2=CL:0000766,9.31e-20,72;CL:0000860,7.67e-18,42;CL:0002057,7.67e-18,42;CL:0000094,1.70e-17,8;CL:0000738,1.53e-16,136;CL:0000473,2.01e-15,48;CL:0000234,2.01e-15,48;CL:0002393,7.15e-15,9;CL:0002397,7.15e-15,9;CL:0002032,1.66e-13,161;CL:0000837,1.66e-13,161;CL:0000037,8.11e-13,168;CL:0000081,8.86e-13,11;CL:0000775,1.15e-12,3;CL:0000763,1.98e-12,108;CL:0000049,1.98e-12,108;CL:0002194,4.93e-12,59;CL:0000576,4.93e-12,59;CL:0000040,4.93e-12,59;CL:0000559,4.93e-12,59;CL:0000988,5.21e-12,177;CL:0002009,1.35e-11,61;CL:0002087,1.93e-11,115;CL:0002031,7.22e-11,120;CL:0000839,1.29e-10,66;CL:0000557,1.94e-10,67 | |||
|ontology_enrichment_development_v019=CL:0002057;1.98e-14;42 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002390!1.20e-20!102;UBERON:0003061!1.20e-20!102;UBERON:0002193!5.44e-18!112;UBERON:0002371!4.08e-16!80;UBERON:0001474!6.31e-15!86;UBERON:0004765!9.31e-15!101;UBERON:0001434!9.31e-15!101;UBERON:0002405!2.77e-11!115;UBERON:0002384!6.21e-09!375;UBERON:0002204!2.27e-08!167 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002390,8.24e-12,98;UBERON:0003061,8.24e-12,98;UBERON:0002193,1.60e-10,108;UBERON:0002371,4.86e-09,76;UBERON:0001474,2.82e-08,82;UBERON:0004765,2.05e-07,90;UBERON:0002405,3.96e-07,93 | |||
|phase1_expression=0.363356758541113,0,0.140954404095971,0,0,0,0,0,0.783556884599516,0.491467873003018,0,0,0,0,0,0,0,0,0,0.123121058076788,0,0,0,0,0,0,0,0.157421562627358,1.57345710739562,0.383829398097213,0.619264493264304,0,0,0,0,0,0.587200878669695,1.66198622559563,0.601633342410425,0.651032612147555,0,0,0,1.30858414901608,1.13362783106643,0,0.697287110717054,0.411167888021826,0.619412741790207,0.575384784644301,0,0.47296445977717,0.344745680736619,0,0,2.07066573496865,0,0.224723484445085,0,0.641858054152187,0,0.329851300186716,0,0.852449501065388,0.290209238628584,1.13477044938228,0.622822248995575,0.251248665256743,0,0.65156653411535,0,0.368277635987565,0.316462387440884,1.26753171787165,0.637812899895131,1.25795187305026,1.12328631146495,0.600707571366025,1.12507910687956,1.42506371870624,0.99458338599545,0.730656615058536,1.75996244461323,0.546138611262131,0,0,0.800791974072025,2.29900975981793,1.98313461835459,0,0,0,0,0,0.560508562981536,0,0,0,0,0,0.32592226663359,0.473447805734733,0,0,0,0.221533894583621,0,0,0.130059347559878,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.127986611154418,1.24930726552346,0,0,0,0,0,0,0,0,0,0.50133791063589,0.144846518960824,0,0.486634870302636,0,0,0,0,0,0.370784442784429,0,0,0,0,0.571994910780128,0,0.198762407366705,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0892997282840798,0,0,0,0,0,2.63560834872127,0,0,0,0,0.397227542439656,0,0,0,0,0.24666754841716,0,0,0,0.151357427644931,0,0,0,0.570471821544449,0,0,0,0.140450806702248,0.204154171254893,0,0.103325781175765,0,0,0,0,0.168336113954066,0.250237039743928,0,0,0.30648779579902,0,0,0.179389635688862,0,0.211931901159562,0,0,0,0,0,0,0,0.184099797284599,0.323292113637624,0.355009592516614,0,0,0,0.272746120590835,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0925884451585296,0,0,0,0,0,0,0,0,0,0,0.246217006087397,0,0,0,0,0,0,0,0,0,0,0,0.144119953416961,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.514414748524284,0,0,0.142977993658148,0.542621605391443,0,0,0,0,0,0,0,0,0.502257091432126,0,0,0,0,0,0,0,0,0,0.431255149719035,0,0,0,0,0,0,2.99602809578873,0,5.8018171881045,0,0,0,0,0,0,0,0,0,0,0,0,0.0868836144680828,0,0.343143423810856,0,0.862856803274467,0.426910231213777,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.182091168006717,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.219259876645935,0.261435451024901,0,0,0,0,0,0,0,0,0,0.193341436584244,0,0,0.137836572484531,0,0,0.0852266274161009,0,0,0,0.127612712494584,0.10115778085555,0,0,0,0,0,1.73986598415015,0.18532421910392,0,0.372158369359667,0,0,0,0,0.636406495851874,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.578775534266688,0,0,0,0,0,0,0,0.354761064070598,0.422215270595328,0.329294892959902,0,0.349934720244983,0,0,0,0.0941438007767792,0,0,0,0,0,2.29391162142713,1.70894156152249,0.238231775457789,0,0,0.540031437238115,0.79312517629427,0,0,0.245040215981032,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.223676107892416,0,0,0,0,0,0,0,0,0.146508179271894,0,0.222886768554957,0,0,0.296964680832639,0,0,0,0.111308705022906,0,0,0.19924798825107,0,0,0,0,0,0,0,0,0,2.3948309234694,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.120596438625408,0,0.110579259931225,0,0,0,0,0.153900517007594,0.113942055847001,0,0,0,0.31900115973192,0,0,0,0,0,0.225595660617181,0,0.167821586975843,0,0,0,0,0,0,0.995261931078505,0.0884575645033392,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.313932918407225,0,0,0,0,0.0979923974143777,0.0870592065804026,0,0,0,0,0.0821154570532092,0,0,0,0,0.19871461170299,0,0,0,0,0.19980960958213,0,0,0,0,0,0.235694034616795,0,0,0.101998217636322,0,0,0.273810757783986,0,0,0,0,0,0,0,0,0,0.0671834724867263,0,0,0,0,0,0,0,0,0,0,0.137539436597234,0,0,0,0,0,0,0.104909176269996,0,0,0,0,0,0,0,0,0.326587360109409,0,0.082092520749339,0,0,0,0,0,0,0,0,0.213574825135389,0.314408610199332,0,0,0.197611631897944,0,0,1.63205341010842,0.2506898940227,0,1.31149052283922,0,0,0,0.1251909307065,0,0,0,0,0,0,0,0,0,0,0,0.233713309847224,0.554805861502613,0,0.251567901752575,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.107410557042488,0,0,0,0.343395705182793,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.327609848846413,0,0,0,0,0.172214979660816,0,0.184105950251841,0,0,0,0,0,0,0,0,0,0,0,0.0788617450012534,0,0,0,0,0,0,0,0.252071696221718,0,0,0,0,0,0.183428598521679,0,0,0,0.198916222116275,0.0752103283492573,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.227662191351298,0,0.115233987555779,0,0,0,0,0,0.078493092850514,0,0,0,0,0,0.285906176706625,0.158013611732727,0,0,0,0,0,0,0,0.118332000730565,0,0,0,0,0,0,0,0.121917924982269,0,0,0,0,0.467878926924211,0,0,0,0,0,0,0,0,0.490296643507811,0,0.196308467114945,0,0,0,0.281951753939561,0.0644578879735772,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.26721740526556,0.459474497674225,0,0,0,0,0,0.213233981900981,0,0.129177819672012,0.0620747142958579,0.112131862580613,0,0,0,0,0.0673520530145875,0.0717222053926763,0,0,0,0,0,0,0,0,0,0,0 | |||
|short_description=p@chr10:104405760..104405771,- | |||
}} |
Revision as of 04:44, 11 January 2014
Short description: | p@chr10:104405760..104405771, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | No |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr10:104405760..104405771, - |
Coexpression cluster: | NA |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
myeloid leukocyte | 9.31e-20 | 72 |
classical monocyte | 7.67e-18 | 42 |
CD14-positive, CD16-negative classical monocyte | 7.67e-18 | 42 |
granulocyte | 1.70e-17 | 8 |
leukocyte | 1.53e-16 | 136 |
defensive cell | 2.01e-15 | 48 |
phagocyte | 2.01e-15 | 48 |
intermediate monocyte | 7.15e-15 | 9 |
CD14-positive, CD16-positive monocyte | 7.15e-15 | 9 |
hematopoietic oligopotent progenitor cell | 1.66e-13 | 161 |
hematopoietic multipotent progenitor cell | 1.66e-13 | 161 |
hematopoietic stem cell | 8.11e-13 | 168 |
blood cell | 8.86e-13 | 11 |
neutrophil | 1.15e-12 | 3 |
myeloid cell | 1.98e-12 | 108 |
common myeloid progenitor | 1.98e-12 | 108 |
monopoietic cell | 4.93e-12 | 59 |
monocyte | 4.93e-12 | 59 |
monoblast | 4.93e-12 | 59 |
promonocyte | 4.93e-12 | 59 |
hematopoietic cell | 5.21e-12 | 177 |
macrophage dendritic cell progenitor | 1.35e-11 | 61 |
nongranular leukocyte | 1.93e-11 | 115 |
hematopoietic lineage restricted progenitor cell | 7.22e-11 | 120 |
myeloid lineage restricted progenitor cell | 1.29e-10 | 66 |
granulocyte monocyte progenitor cell | 1.94e-10 | 67 |
Ontology term | p-value | n |
---|---|---|
hematopoietic system | 8.24e-12 | 98 |
blood island | 8.24e-12 | 98 |
hemolymphoid system | 1.60e-10 | 108 |
bone marrow | 4.86e-09 | 76 |
bone element | 2.82e-08 | 82 |
skeletal element | 2.05e-07 | 90 |
immune system | 3.96e-07 | 93 |