FFCP PHASE1:Hg19::chr10:116527182..116527187,+: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport= | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |||
|TSSclassifier=weak | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|description=CAGE_peak_at_chr10:116527182..116527187,+ | |||
|id=chr10:116527182..116527187,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019=CL:0002567;1.04e-10;3 | |||
|ontology_enrichment_celltype_v019_2=CL:0002567,8.99e-11,3 | |||
|ontology_enrichment_development_v019=UBERON:0000358;1.15e-29;1!UBERON:0010226;1.15e-29;1!UBERON:0010122;1.15e-15;2!UBERON:0006241;1.04e-10;3!UBERON:0006215;1.04e-10;3!UBERON:0003057;1.04e-10;3 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001049!5.39e-54!57;UBERON:0005068!5.39e-54!57;UBERON:0006241!5.39e-54!57;UBERON:0007135!5.39e-54!57;UBERON:0001017!3.86e-47!82;UBERON:0005743!1.58e-44!86;UBERON:0002616!8.08e-42!59;UBERON:0000073!1.92e-39!94;UBERON:0001016!1.92e-39!94;UBERON:0003075!2.02e-37!86;UBERON:0007284!2.02e-37!86;UBERON:0000955!1.25e-36!69;UBERON:0006238!1.25e-36!69;UBERON:0002346!2.35e-35!90;UBERON:0007023!7.36e-32!115;UBERON:0002780!9.25e-30!41;UBERON:0001890!9.25e-30!41;UBERON:0006240!9.25e-30!41;UBERON:0003080!6.24e-29!42;UBERON:0003076!7.19e-29!15;UBERON:0003057!7.19e-29!15;UBERON:0002020!3.80e-27!34;UBERON:0003528!3.80e-27!34;UBERON:0001893!7.67e-27!34;UBERON:0002791!6.63e-25!33;UBERON:0002619!5.48e-23!22;UBERON:0001869!9.65e-23!32;UBERON:0000153!2.44e-21!129;UBERON:0007811!2.44e-21!129;UBERON:0004121!2.80e-20!169;UBERON:0004733!3.91e-20!12;UBERON:0002028!3.91e-20!12;UBERON:0007277!3.91e-20!12;UBERON:0003056!3.96e-20!61;UBERON:0000956!6.11e-20!25;UBERON:0000203!6.11e-20!25;UBERON:0000033!7.20e-20!123;UBERON:0000924!1.39e-19!173;UBERON:0006601!1.39e-19!173;UBERON:0002298!1.78e-18!8;UBERON:0004732!1.91e-18!13;UBERON:0001950!3.24e-18!20;UBERON:0000025!1.01e-16!194;UBERON:0000200!1.28e-12!6;UBERON:0004111!2.21e-12!241;UBERON:0002680!3.01e-12!9;UBERON:0001895!3.01e-12!9;UBERON:0010092!3.01e-12!9;UBERON:0002240!4.47e-11!3;UBERON:0002771!1.85e-10!3;UBERON:0001896!1.91e-10!3;UBERON:0005290!1.91e-10!3;UBERON:0010096!1.91e-10!3;UBERON:0000477!3.03e-10!286;UBERON:0006331!5.56e-10!3;UBERON:0000988!5.74e-10!3;UBERON:0000483!9.64e-09!309;UBERON:0002308!1.23e-08!9;UBERON:0000125!1.23e-08!9;UBERON:0000119!1.46e-08!312;UBERON:0000064!8.87e-08!219;UBERON:0001954!9.91e-08!2;UBERON:0003022!9.91e-08!2;UBERON:0002421!9.91e-08!2;UBERON:0002600!9.91e-08!2;UBERON:0000475!1.98e-07!365;UBERON:0002148!2.22e-07!2;UBERON:0009662!2.22e-07!2;UBERON:0001897!2.94e-07!2;UBERON:0005174!9.01e-07!5;UBERON:0001137!9.01e-07!5 | |||
|ontology_enrichment_uberon_v019=UBERON:0002084;1.15e-29;1!UBERON:0002082;1.15e-29;1!UBERON:0001873;1.15e-15;2!UBERON:0002148;2.21e-15;2!UBERON:0006331;2.21e-15;2!UBERON:0009662;2.21e-15;2!UBERON:0000125;1.27e-13;9!UBERON:0002308;1.27e-13;9!UBERON:0002680;1.69e-13;9!UBERON:0001895;1.69e-13;9!UBERON:0005383;6.73e-11;3!UBERON:0005382;6.73e-11;3!UBERON:0004151;7.78e-11;3!UBERON:0000988;1.04e-10;3!UBERON:0002240;1.04e-10;3!UBERON:0005174;1.04e-10;3!UBERON:0001137;1.04e-10;3!UBERON:0004733;2.24e-10;12!UBERON:0002028;2.24e-10;12!UBERON:0004732;1.18e-09;13!UBERON:0000369;1.70e-08;4!UBERON:0002435;1.70e-08;4!UBERON:0000204;1.70e-08;4 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002084,9.99e-30,1;UBERON:0002082,9.99e-30,1;UBERON:0010226,9.99e-30,1;UBERON:0003076,1.55e-17,15;UBERON:0003057,1.55e-17,15;UBERON:0001873,1.15e-15,2;UBERON:0010122,1.15e-15,2;UBERON:0002148,2.74e-15,2;UBERON:0006331,2.74e-15,2;UBERON:0009662,2.74e-15,2;UBERON:0000125,1.40e-13,9;UBERON:0002308,1.40e-13,9;UBERON:0002680,1.80e-13,9;UBERON:0001895,1.80e-13,9;UBERON:0010092,1.80e-13,9;UBERON:0005383,6.73e-11,3;UBERON:0005382,6.73e-11,3;UBERON:0004151,7.42e-11,3;UBERON:0002240,1.09e-10,3;UBERON:0005174,1.09e-10,3;UBERON:0001137,1.09e-10,3;UBERON:0000988,1.20e-10,3;UBERON:0004733,2.34e-10,12;UBERON:0002028,2.34e-10,12;UBERON:0007277,2.34e-10,12;UBERON:0004732,1.24e-09,13;UBERON:0000369,1.70e-08,4;UBERON:0002435,1.70e-08,4;UBERON:0000204,1.70e-08,4;UBERON:0010082,1.70e-08,4;UBERON:0001049,2.06e-08,56;UBERON:0005068,2.06e-08,56;UBERON:0006241,2.06e-08,56;UBERON:0007135,2.06e-08,56 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.123121058076788,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.087834785693126,0.196468613246569,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0920498986422993,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.71072446022705,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.167516265334349,0.637938751653163,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.254876273045038,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0962221127255121,0,0,0.0941438007767792,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.146508179271894,0,0,0,0,0,0,0,0.281338832821026,0,0,0,0,0,0,0,0,0,0.0898683511473268,0,0,0,0,0,0,0.278304294485554,0,0,0,0,0,0,0,0,0,0,3.54296554325536,0,0,1.3269511191747,0.886642856860642,0.219385397153973,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.995261931078505,0,0,0,0,0,0.202203398942031,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.126621591911757,0,0.0801588202515337,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.399358000997982,0,0,0.268733889946905,0,0,0,0,0,0.0984274815147488,0,0.795229689809303,0.408610218334727,0.160753148465019,0,0,0,0,0.0607495566580247,0,0,0.209818352539992,0,0,0,0,2.64836788146173,0,0,0,0.326587360109409,0,0,0,0,0,0,1.0342636508924,0.13223260174269,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.244052529803926,0.751145584238999,0.573409195690071,0.221858103073705,0.372578417648301,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.155262956876259,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.276516872303462,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.80057074828547,0,0,0,0,0.319267718114302,0.205116364240755,0,0.0691572524642179,0,0,0,0,0,0,0,0,0,0.150420656698515,0.20170506870352,0,0,0,0,0.0675375846183947,0,0.206686796501184,0.126831620387814,0,0,0,0,0,0,0,0,0.227662191351298,0,0,0,0.135939465953663,0.0657727735628491,0,0,0,0.157115589916002,0,0,0,0,0,0,0,0,0,0,0.17071847709395,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.397901550322736,0,0,0,0,0,0,0,0,0.235676547101626,0.981542335574726,1.18818560130834,0.8453114551668,0,0,0,0,0,0,0,0,0,0.143339583151451,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.829169439458779,0.103432995861895,0,0.23806443146374,0,0.0620747142958579,0,0,0,0,0,0,0,0,0,0,0,0,2.34640942403454,0,0,0,0,0 | |||
|short_description=p@chr10:116527182..116527187,+ | |||
}} |
Revision as of 05:07, 11 January 2014
Short description: | p@chr10:116527182..116527187, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | No |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr10:116527182..116527187, + |
Coexpression cluster: | NA |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
light melanocyte | 8.99e-11 | 3 |
Ontology term | p-value | n |
---|---|---|
heart left ventricle | 9.99e-30 | 1 |
cardiac ventricle | 9.99e-30 | 1 |
future cardiac ventricle | 9.99e-30 | 1 |
posterior neural tube | 1.55e-17 | 15 |
chordal neural plate | 1.55e-17 | 15 |
caudate nucleus | 1.15e-15 | 2 |
future caudate nucleus | 1.15e-15 | 2 |
locus ceruleus | 2.74e-15 | 2 |
brainstem nucleus | 2.74e-15 | 2 |
hindbrain nucleus | 2.74e-15 | 2 |
neural nucleus | 1.40e-13 | 9 |
nucleus of brain | 1.40e-13 | 9 |
regional part of metencephalon | 1.80e-13 | 9 |
metencephalon | 1.80e-13 | 9 |
future metencephalon | 1.80e-13 | 9 |
caudate-putamen | 6.73e-11 | 3 |
dorsal striatum | 6.73e-11 | 3 |
cardiac chamber | 7.42e-11 | 3 |
spinal cord | 1.09e-10 | 3 |
dorsal region element | 1.09e-10 | 3 |
dorsum | 1.09e-10 | 3 |
pons | 1.20e-10 | 3 |
segmental subdivision of hindbrain | 2.34e-10 | 12 |
hindbrain | 2.34e-10 | 12 |
presumptive hindbrain | 2.34e-10 | 12 |
segmental subdivision of nervous system | 1.24e-09 | 13 |
corpus striatum | 1.70e-08 | 4 |
striatum | 1.70e-08 | 4 |
ventral part of telencephalon | 1.70e-08 | 4 |
future corpus striatum | 1.70e-08 | 4 |
neural tube | 2.06e-08 | 56 |
neural rod | 2.06e-08 | 56 |
future spinal cord | 2.06e-08 | 56 |
neural keel | 2.06e-08 | 56 |