FFCP PHASE1:Hg19::chr11:9685751..9685772,+: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
Line 1: | Line 1: | ||
{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=23075 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=17070 | |||
|TSSclassifier=strong | |||
|UniProt= | |||
|association_with_transcript=69bp_to_ENST00000524817_5end | |||
|coexpression_cluster_id=C1651 | |||
|description=CAGE_peak_2_at_SWAP70_5end | |||
|id=chr11:9685751..9685772,+ | |||
|ontology_enrichment_celltype=CL:0000034!1.35e-10!444;CL:0002139!1.82e-10!24;CL:0000048!4.31e-10!430;CL:0000945!5.06e-10!24;CL:0000826!5.06e-10!24;CL:0000723!1.25e-09!436;CL:0000236!2.86e-08!14;CL:0000055!2.51e-07!180;CL:0000071!3.20e-07!18;CL:0002546!3.20e-07!18;CL:0000115!5.67e-07!35;CL:0000057!8.53e-07!75 | |||
|ontology_enrichment_celltype_v019=CL:0000945;1.48e-14;24!CL:0002139;5.32e-14;24!CL:0000236;1.28e-11;13!CL:0000071;8.90e-09;18!CL:0000115;6.00e-08;36!CL:0002620;1.49e-07;23!CL:0002138;2.54e-07;6 | |||
|ontology_enrichment_celltype_v019_2=CL:0000945,1.37e-14,24;CL:0000826,1.37e-14,24;CL:0002139,2.11e-14,24;CL:0000048,5.48e-13,427;CL:0000034,2.56e-12,441;CL:0000723,2.61e-12,433;CL:0000236,1.52e-10,14;CL:0000115,2.45e-09,36;CL:0000071,5.09e-09,18;CL:0002546,5.09e-09,18;CL:0000134,5.40e-08,354;CL:0002078,6.27e-08,45;CL:0000057,1.09e-07,76;CL:0005020,1.71e-07,6;CL:0002138,1.71e-07,6;CL:0005022,1.71e-07,6;CL:0002620,1.77e-07,23;CL:0002320,2.33e-07,361 | |||
|ontology_enrichment_development_v019=CL:0002546;8.90e-09;18!CL:0005022;2.54e-07;6 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000055!1.83e-13!69;UBERON:0002049!1.49e-12!79;UBERON:0007798!1.49e-12!79;UBERON:0001981!1.92e-12!60;UBERON:0007500!1.92e-12!60;UBERON:0004537!1.92e-12!60;UBERON:0006965!1.92e-12!60;UBERON:0001637!2.57e-10!42;UBERON:0003509!2.57e-10!42;UBERON:0004572!2.57e-10!42;UBERON:0004535!4.26e-10!110;UBERON:0004872!6.51e-10!84;UBERON:0001009!1.88e-09!113;UBERON:0000947!1.73e-07!21;UBERON:0010191!1.73e-07!21;UBERON:0003081!2.32e-07!216;UBERON:0001986!3.20e-07!18;UBERON:0004638!3.20e-07!18;UBERON:0004852!3.20e-07!18;UBERON:0004573!4.47e-07!33;UBERON:0004571!4.47e-07!33 | |||
|ontology_enrichment_uberon_v019=UBERON:0001637;9.95e-12;42!UBERON:0003509;9.95e-12;42!UBERON:0004572;9.95e-12;42!UBERON:0000055;1.68e-10;65!UBERON:0007500;2.02e-09;56!UBERON:0001981;2.02e-09;56!UBERON:0004537;2.02e-09;56!UBERON:0004638;8.90e-09;18!UBERON:0001986;8.90e-09;18!UBERON:0004852;8.90e-09;18!UBERON:0004573;1.12e-08;33!UBERON:0004571;1.12e-08;33!UBERON:0000947;3.18e-08;21!UBERON:0010191;3.18e-08;21!UBERON:0002049;4.61e-08;75!UBERON:0007798;4.61e-08;75!UBERON:0006914;2.84e-07;25 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000055,4.38e-20,68;UBERON:0007500,7.34e-17,59;UBERON:0001981,7.34e-17,59;UBERON:0004537,7.34e-17,59;UBERON:0006965,7.34e-17,59;UBERON:0002049,1.48e-16,78;UBERON:0007798,1.48e-16,78;UBERON:0001637,2.12e-14,42;UBERON:0003509,2.12e-14,42;UBERON:0004572,2.12e-14,42;UBERON:0004872,5.46e-13,83;UBERON:0004535,2.51e-10,109;UBERON:0001009,1.09e-09,112;UBERON:0004573,2.10e-09,33;UBERON:0004571,2.10e-09,33;UBERON:0004638,5.09e-09,18;UBERON:0001986,5.09e-09,18;UBERON:0004852,5.09e-09,18;UBERON:0000947,1.63e-08,21;UBERON:0010191,1.63e-08,21;UBERON:0004457,2.72e-08,12;UBERON:0000042,2.72e-08,12;UBERON:0006914,1.45e-07,25;UBERON:0003081,2.36e-07,203;UBERON:0002384,4.39e-07,371 | |||
|phase1_expression=5.08699461957559,1.71280419112787,2.81908808191942,3.00219895059391,0.446961094427288,2.61701557230111,0,0,0.783556884599516,0,0,0.218441372130172,0.263766978228454,0.123766352960047,0,5.3786011716142,1.80808358407193,2.92124036154949,2.92759679274304,0.492484232307152,0,0,0.286235987131057,0.136874425072884,0.251085279189606,1.29902789771517,1.64201178899891,1.25937250101887,0.393364276848904,0,0.309632246632152,0,0,0,2.32401601740905,13.3639078538176,0.293600439334847,0,0,0.217010870715852,0.671746422719773,0.32389366601898,0,1.16318591023652,1.13362783106643,0.970336244751265,1.39457422143411,0.822335776043652,0.619412741790207,1.1507695692886,0.768482119587302,0.236482229888585,0.689491361473237,1.93645405075148,1.35426486594342,2.25890807451126,1.63743690034707,2.02251136000576,0.612167784741805,2.24650318953266,2.55734850319616,0.659702600373432,0.598390972864896,0.426224750532694,0.870627715885752,1.13477044938228,1.24564449799115,0.502497330513487,0,0.65156653411535,1.21079900526674,0,1.26584954976354,0.633765858935825,0.637812899895131,0,0,0.150176892841506,0,0.570025487482497,0.79566670879636,0.547992461293902,10.5597746676794,8.19207916893197,7.11607403090844,3.84057200309856,7.20712776664822,6.32227683949932,5.2883589822789,0.954053754535364,4.55370375287559,11.7447437874188,6.49864487812889,1.32171328579026,1.68152568894461,0.790152254325231,0,0,0,0,0,0,0,0,0,0,0.270803863765016,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.950452044448374,0,0,0,0,0,0,0,0,0,0,0.383587685530591,2.1686349143074,1.00267582127178,1.30361867064741,0.795285947051099,0,0.283604451492204,0.221729397462564,0.087834785693126,0.327447688744282,0,0.370784442784429,0.649094787309367,0.174129737299267,0.664789802594326,0,0.571994910780128,0.371457501329565,4.37277296206751,1.72046919021225,0.694281003215189,2.26123176769604,2.51699661725944,2.75118041940067,1.46296476575767,3.10100111003195,4.26919515224052,3.68192674041137,2.41697590265488,0,0.732186172644509,6.25027236587977,0.81014194788176,1.51809538082936,1.12264686313085,2.0270066486998,3.06633274931766,1.89853131913626,1.46561395144326,0,0,0,0.496971951695318,4.17880688493113,3.31022952033047,3.44203944898576,2.4826786753885,0.560677600142307,1.06748995729705,0.49333509683432,0.622422070799533,0.404132016209064,1.47115712802113,0.605429710579726,0,0.234321431833797,0,0.570471821544449,1.34503812496621,0.352303495931295,0.161872944368132,0.280901613404497,0.204154171254893,0.368502951935304,0.103325781175765,3.56400857184616,2.22540236350701,0,0,0.841680569770331,0.125118519871964,0.277064115484183,2.19488810440419,1.5324389789951,0.600952235626387,2.04177929688038,1.07633781413317,2.77624605464138,4.87443372666992,2.10063767259082,3.19462840639161,4.3798891807757,4.09457083929498,0.675105328965065,1.55899208257918,2.27190396819703,5.24684422261106,6.30419621593366,1.77504796258307,1.10827308050404,1.3564847384839,0.773043412653187,0.272746120590835,1.14721838155602,0.243947412259191,0.927708378250397,0.580969714347592,0.414644220061482,0.504641701751257,0.72995471815166,1.56449532329816,0,1.38134921352481,1.85747171212792,2.16563844500876,0.473227200159376,0.337169380156203,0,0.661763836394364,0.653638332277218,0.71181185733329,0.808987848960987,0.588664395376038,0.38474715694639,0.738155454624648,0,0,0,0,0,0,0,0.491953754172454,0.514703430895577,0.878002283269004,0,0.100528972411631,0,0,0,1.44331342025273,0.115930404975077,0.352226082707465,3.17606185074362,1.85194205030644,3.23432058798817,0,0,0,0.702012795417713,0.891786973732369,0,0.839910640994298,0.283550194484773,0.716468181622786,0.581267877027924,0,2.46331618947972,2.81754988842323,0,0.720599767084807,0.75745460055828,0.253991577168676,0,0,0,0.102827492703324,0.600686115687835,0.857479297891735,0.448524337381443,0,0.80672114403045,0.258543431515556,0,0,1.32969058292435,2.08014873822732,0,0,0,0.428933980974443,0,0,0,0.355391948742546,0,0.301439377059586,0,0,1.2162378064119,2.00902836572851,2.10833939483032,0.479249710983165,1.14861935834114,0,1.44781306667579,0.61642896765115,1.25342674267927,0,0,0,0.256686072559497,1.01637849688985,0,0,0,0,0,0,0.414415513436035,0.12269149171914,0,0,1.87173775377726,3.03329280955175,1.57702415033935,0.468565659970853,0.902838299183157,2.27407504055985,0,0,0.184369168541703,1.91143951829782,0.391602314925481,0,0.82707210449155,0.431428401637234,0.213455115606889,0,0,0,3.96972492510043,2.455391572609,2.52594084989766,4.48487022394953,6.14048698880044,1.93024705372329,0,0.154209693802656,0.532685175939381,0.492762936082855,0.519254429183621,0.116210378459959,0,0.802025881213139,0,0.34444334449382,0.546273504020151,0.393373244878272,0,0.15403067420883,0,0,0,0,1.36074964221213,0.647747748306418,1.54227252690289,0,0,0,0,0,0.438519753291869,0.261435451024901,0,0,0,0,0,0,0,0,0,0,0.462145851343933,0,0.275673144969061,1.18162269355101,0.290033387828457,0.426133137080504,0.712256285173899,0.165284915360978,0,0.382838137483752,0,0.929691098594572,0,0,3.08033580176089,2.12922412126809,0.869932992075073,2.40921484835096,1.28812398067792,1.48863347743867,0.316379424718726,0.571890581771475,0,0,0.318203247925937,0,0.359744915166629,0.54907405947211,0.471249609382746,1.41527737101321,0,0,0,3.1682753652067,0,0.682499557039929,0.565621727814851,2.26016233240486,0.551365343546124,4.64407282668854,2.19225442626881,0,1.31178950409327,1.62328301570163,1.8589409885985,5.07052084558035,0.573645408816206,0.785992328104969,0.35667105148125,0,1.68886108238131,3.95153871551882,0,0.349934720244983,0,0,0,0.188287601553558,0,0,0,0,1.52234282769651,0,0,0.952927101831156,0.822724546172388,0.648473311192717,0,0,3.20472213382419,0,0.245040215981032,4.08766985276581,0.144269212976445,0,0,0.199579371432817,3.4470966623826,1.05836791361941,0,1.12318871245384,0,0,0,2.03150133361924,0.1605880751037,0,0,0,0.614481528616916,0.223676107892416,0,0,1.67043704337145,0,0,0.66614393599564,0,0,1.17206543417515,0.36408156524854,0,0.568272293612826,0.47748896947538,0.593929361665277,0,0,0,0.111308705022906,0,0.211125408127993,0.398495976502139,1.93398740871803,0,0,1.47701766553283,0.311039587661807,0,0,0,1.28236427328014,0,1.11136990144637,0,0.0927680981618513,0,0,0,0,0.682760689712998,0,0.472775363535873,0,0,0.173624994933292,0,0,0,0,0,1.09692698576986,0,0.139423744278603,0.230850775511391,0.797594390929008,0,0.538545866458633,0.651884231532048,0.638002319463839,1.28236630762607,1.06606955203727,0,0.31396051279005,0.166211681900156,0.225595660617181,0,0,0,0.158936578980379,0,0.163232808159148,0.282706142867882,0,0,0,0.611030144933625,0.889563386041866,0.123563938946503,0.208843899010911,0.067401132980677,0,0.234264445725339,4.37891494117598,0,0.485560759068186,0,1.20990716048664,0,2.90658266291045,0.150323419414493,0,0,0,0,0,0,0.554698692052555,0.173559738335131,0.685946781900644,0,1.04836000945218,8.25532955863759,0,0.292357268344742,0.0821154570532092,0.775912131907355,1.588610280447,0.225980740780532,0,0,0.189932387867636,0.195551382734803,0,0.213452994739353,0.19980960958213,0,2.86341490414789,0,0,0,0,0.815425236441684,1.569042694685,1.12198039399954,0,2.40168115483916,0.273810757783986,0,0,0.788662062837943,1.39641200636127,1.14580212005842,0,0.599037001496973,0,0,0.403100834920358,0.360299883542404,0,0,0,0,0.196854963029498,0.0846733320657845,0.795229689809303,0.272406812223151,0.803765742325096,0.825236619583403,0,10.798746794472,0,0.242998226632099,0.335434687599266,0.709251365692784,0.209818352539992,0.422401346077626,0.179287339332845,0,0,0.662091970365432,0.5085370753095,0,0,0,0,0,0.681552087141687,0.226624183040251,0,0,0.129282956361551,0,0,0,0.320362237703084,0.314408610199332,0.828478110694391,1.48849806543585,0,11.4485042478042,0,0,0.2506898940227,0,0.983617892129413,0,0,0.366078794705889,0.3755727921195,0.573409195690071,0.554645257684261,0.248385611765534,0.553394539744923,0.249960815924213,0,1.14186133417987,0,0.468334905806882,0,0.447764408660622,1.8697064787778,0.554805861502613,0.189403005275089,0.251567901752575,0.889811221596536,0,0.151230923763239,0.310874401165561,1.62640664988597,1.59296767163702,0,0,0,0,2.60872530905867,0,0,0.813741466409323,0.909243296012797,0.214821114084977,0,1.19428766609585,0.800055529326307,2.74716564146234,1.34699795506368,1.26184898228651,0.192619830407303,0.214441591374926,0,0.453411851024545,0.463044948647668,0.244736704506468,0.358177682162975,0.308801447160972,0,0.706756583783524,0.38582807654183,0.168942440653073,0,0.345430341731199,0.303859956177382,0.138258436151731,45.5973122684169,27.7687516254929,23.3898513785857,0.327609848846413,0,0,0,0.426766918776564,0,0,0.368211900503681,0.139879507719444,0.622077260032973,0.255788742607303,0,0,0,0,0,0.123935764259002,0,0.954013051960256,0.315446980005013,0,4.23211132428821,1.2249819094128,0.256916900385838,0,0.478901577171454,0,0,0,0.161475645631851,0,0.490738592505128,0.353909170043221,1.65085738669511,0.346576998451015,0.762764190934334,0,0.596748666348824,0.225630985047772,0.20170506870352,0.781514011233092,1.57144016688853,1.47394725759087,0.147856086217045,0.202612753855184,0,0.413373593002368,0.317079050969534,0,0.548257766857182,1.98484471355718,0,0.511049710558381,1.07140367175657,0,0.606965604236632,0,0.177404740325278,0.691403925334676,0.171488009437418,0.339848664884159,0.197318320688547,0.354581522651905,0.222462803784138,0.313972371402056,0.471346769748006,0,0,0,0,1.07214816264985,0.158013611732727,0.116241425368125,0,0.801711364730253,0,1.0243108625637,0,0,1.30165200803622,2.2155485237381,0.423387050190929,0.22910686854405,0,0.955538938977433,0,0,0.121917924982269,0.647428837187895,0.615976841137482,0,0.485710993059139,0,0,0.118920090777569,0,0,0.150962843566674,0.0771741581079447,0,0,0.490296643507811,0,0.392616934229891,0.594092800654172,0.4226557275834,0.679708458751268,2.06764619555678,1.03132620757723,5.29688126402123,0,0,0,0.730336388246517,0.917458566809082,0,0.315543124386369,0.203974470572744,0.436350690340377,0.5290268405154,0.743990036333503,1.84870251452567,4.32626562123789,0.756998549010474,0.764859003745869,0.126698501011437,0.917899467677836,0.801652215796681,0,0.752122617877125,0.227336094654718,0.267964130156178,1.65833887891756,0,0.852935927603924,0,0.516711278688049,0.31037357147929,0.33639558774184,0.12729431655633,0.606351566874658,1.30630048738177,0,1.34704106029175,0.860666464712116,0,0.325613074443898,0,0,0.0898252021065869,0,0.733448665097199,1.22068853494722,0.665756774185513,2.21401172950129,1.28227396921293 | |||
|short_description=p2@SWAP70 | |||
}} |
Revision as of 06:32, 11 January 2014
Short description: | p2@SWAP70 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_SWAP70_5end |
Coexpression cluster: | C1651_migratory_Burkitt_lymphoma_CD19_immature_epithelioid_Adipocyte |
Association with transcript: | 69bp_to_ENST00000524817_5end |
EntrezGene: | SWAP70 |
HGNC: | 17070 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
lymphocyte of B lineage | 1.37e-14 | 24 |
pro-B cell | 1.37e-14 | 24 |
endothelial cell of vascular tree | 2.11e-14 | 24 |
multi fate stem cell | 5.48e-13 | 427 |
stem cell | 2.56e-12 | 441 |
somatic stem cell | 2.61e-12 | 433 |
B cell | 1.52e-10 | 14 |
endothelial cell | 2.45e-09 | 36 |
blood vessel endothelial cell | 5.09e-09 | 18 |
embryonic blood vessel endothelial progenitor cell | 5.09e-09 | 18 |
mesenchymal cell | 5.40e-08 | 354 |
meso-epithelial cell | 6.27e-08 | 45 |
fibroblast | 1.09e-07 | 76 |
lymphangioblast | 1.71e-07 | 6 |
endothelial cell of lymphatic vessel | 1.71e-07 | 6 |
vascular lymphangioblast | 1.71e-07 | 6 |
skin fibroblast | 1.77e-07 | 23 |
connective tissue cell | 2.33e-07 | 361 |
Ontology term | p-value | n |
---|---|---|
vessel | 4.38e-20 | 68 |
epithelial tube open at both ends | 7.34e-17 | 59 |
blood vessel | 7.34e-17 | 59 |
blood vasculature | 7.34e-17 | 59 |
vascular cord | 7.34e-17 | 59 |
vasculature | 1.48e-16 | 78 |
vascular system | 1.48e-16 | 78 |
artery | 2.12e-14 | 42 |
arterial blood vessel | 2.12e-14 | 42 |
arterial system | 2.12e-14 | 42 |
splanchnic layer of lateral plate mesoderm | 5.46e-13 | 83 |
cardiovascular system | 2.51e-10 | 109 |
circulatory system | 1.09e-09 | 112 |
systemic artery | 2.10e-09 | 33 |
systemic arterial system | 2.10e-09 | 33 |
blood vessel endothelium | 5.09e-09 | 18 |
endothelium | 5.09e-09 | 18 |
cardiovascular system endothelium | 5.09e-09 | 18 |
aorta | 1.63e-08 | 21 |
aortic system | 1.63e-08 | 21 |
cavity lining | 2.72e-08 | 12 |
serous membrane | 2.72e-08 | 12 |
squamous epithelium | 1.45e-07 | 25 |
lateral plate mesoderm | 2.36e-07 | 203 |
connective tissue | 4.39e-07 | 371 |