FFCP PHASE1:Hg19::chr11:121174071..121174093,+: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=not supported | |||
|DPIdataset=robust | |||
|EntrezGene=6309 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=novel_coding | |||
|HGNC=10547 | |||
|TSSclassifier=strong | |||
|UniProt=O75845 | |||
|association_with_transcript=0bp_to_AF187981,CU680288,HQ447381_5end | |||
|description=CAGE_peak_5_at_SC5DL_5end | |||
|id=chr11:121174071..121174093,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019=CL:0002591;1.97e-08;1!CL:0002616;1.97e-08;1 | |||
|ontology_enrichment_celltype_v019_2=CL:0002616,1.02e-08,1;CL:0002591,2.84e-08,1 | |||
|ontology_enrichment_development_v019=UBERON:0005754;1.97e-08;1 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:178;1.97e-08;1!DOID:326;1.97e-08;1!DOID:3978;1.97e-08;1!DOID:3394;1.97e-08;1!DOID:5844;1.97e-08;1 | |||
|ontology_enrichment_disease_v019_2=DOID:178,1.71e-08,1;DOID:326,1.71e-08,1;DOID:3978,1.71e-08,1;DOID:3394,1.71e-08,1;DOID:5844,1.71e-08,1 | |||
|ontology_enrichment_uberon=UBERON:0005743!1.29e-07!86;UBERON:0001017!1.52e-07!82;UBERON:0001049!1.87e-07!57;UBERON:0005068!1.87e-07!57;UBERON:0006241!1.87e-07!57;UBERON:0007135!1.87e-07!57 | |||
|ontology_enrichment_uberon_v019=UBERON:0002038;1.97e-08;1!UBERON:0000998;1.97e-08;1!UBERON:0006868;1.97e-08;1!UBERON:0009661;1.97e-08;1!UBERON:0002950;1.97e-08;1!UBERON:0001891;1.97e-08;1!UBERON:0002619;1.20e-07;22!UBERON:0000956;9.71e-07;25!UBERON:0000203;9.71e-07;25 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000998,2.29e-08,1;UBERON:0006868,2.29e-08,1;UBERON:0002038,3.79e-08,1;UBERON:0009661,3.79e-08,1;UBERON:0002950,3.79e-08,1;UBERON:0001891,3.79e-08,1;UBERON:0009616,3.79e-08,1;UBERON:0010286,3.79e-08,1;UBERON:0002619,8.96e-08,22;UBERON:0002791,2.21e-07,32;UBERON:0001017,5.52e-07,81;UBERON:0001049,5.83e-07,56;UBERON:0005068,5.83e-07,56;UBERON:0006241,5.83e-07,56;UBERON:0007135,5.83e-07,56;UBERON:0003528,6.27e-07,34;UBERON:0002020,6.27e-07,34;UBERON:0001893,6.27e-07,34;UBERON:0003075,6.32e-07,82;UBERON:0007284,6.32e-07,82;UBERON:0000956,7.54e-07,25;UBERON:0000203,7.54e-07,25 | |||
|phase1_expression=0,0.642301571672949,0.140954404095971,3.00219895059391,0,1.74467704820074,2.53299878168311,0,0,0,0,0,0,0,0,0,0,0,0.975865597581014,0,0,0.313454721478088,0,0,0.627713197974014,0.152826811495903,0,0,0,0,0,0,0,0.739508020333575,0.0774672005803016,0.568676929949686,0,0,0,0,0,0,0.257575567634187,0,0,0,0,0,0,0.28769239232215,0.256160706529101,0,0,0,0,0.376484679085209,0.272906150057846,0.224723484445085,0,0,0.639337125799041,0,0.199463657621632,0,0,0,0,0,0,0,0.605399502633369,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.111410456885174,0,0,0,0,0,0.164437904603676,0.829050053357545,0,0,0,0,0.113309342697566,0,0,0.253019692019503,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.144846518960824,0,0,0.378139268656271,1.10864698731282,0.263504357079378,0.130979075497713,0,0,0,0,0.664789802594326,0,0,0,0,0,0.347140501607594,0,0.419499436209906,0,0,0,0,0,0,0,0,0,0,0.0892997282840798,0,0.112611480483322,0,0,0.183201743930407,0,0,0,0.496971951695318,0.12663051166458,0,0,0.354668382198357,0,0,0,0.311211035399766,0.134710672069688,0.653847612453835,0,1.15235184896,0,0,0,0.298897361103602,0,0.323745888736263,0.280901613404497,0,0.61417158655884,0,0,0.494533858557114,0,0,0,0.125118519871964,0,0,0,0.150238058906597,0.680593098960126,0,0,0.211931901159562,0.300091096084402,0.206105058476878,0.257640540045629,0,0.337552664482532,0,0.252433774244115,0,0.161646056818812,0.355009592516614,0.201504196455281,0.169560592310488,0.193260853163297,0.272746120590835,0,0.243947412259191,0.265059536642971,0.580969714347592,0.414644220061482,0,0.36497735907583,0,0.643240938192885,0,0,0.721879481669586,0.591534000199219,0.505754070234305,0.241011029883482,0.441175890929576,0.653638332277218,0.474541238222193,0.539325232640658,0.784885860501384,0.769494313892781,0.738155454624648,0,0,0,5.07020139287323,2.94848165003288,0.590789906681404,0,1.35287282397425,0.171567810298526,0.219500570817251,0,0.201057944823262,0.0925884451585296,0,0,0,0,0.117408694235822,0.144366447761074,0.462985512576611,0.190254152234598,0.790204397959275,0,0,0.234004265139238,0.891786973732369,0,0.16798212819886,0,0.0895585227028483,0,0.383382679165211,0,0,0,0,0,0,0,0,0,0.205654985406647,0,0.571652865261156,0.112131084345361,0,0.22001485746285,0.129271715757778,0,0,0.26593811658487,2.08014873822732,0,0,0.266422179016099,0.142977993658148,0,0,0.325736184293735,0.355391948742546,0,0.301439377059586,0,0.299918973546171,0,1.00451418286425,0,0.718874566474748,0,0,0.144781306667579,0.205476322550383,0.537182889719687,0,0,0,0.128343036279748,0,0,0,0.167516265334349,1.91381625495949,0,0,0,0.12269149171914,0,0,0,0.535286966391485,0.315404830067869,0,0,0,0,0,0,0,0.391602314925481,0,0,0,0,0.303127571446259,0,0,0.496215615637554,0.153461973288062,0.280660094433074,0,0,0.482561763430822,0,0.308419387605311,0.177561725313127,0,0,0,0.241718899183244,1.00253235151642,0.552485933615378,0.114814448164607,0.728364672026868,0.524497659837696,0,0.0770153371044148,0,0,0.211103257785751,0,0.170093705276516,0,0,0,0,0,0,0,0.438519753291869,0,0.512900250232778,0.328014645699706,0,0.206082023295445,0,0,0,0.650060246036521,0,0,0.308097234229289,0.15350367472613,0.275673144969061,0.214840489736547,0.290033387828457,0,0.0890320356467374,0.165284915360978,0.192190067365106,0.127612712494584,0.10115778085555,0,0,0,0,0,0,0,0.143124886741991,0.372158369359667,0,0.38126038784765,0,0.42793898803392,0,0,0.899362287916574,0,0.353437207037059,0,0,0,0,0,0,0.272999822815972,0,1.13008116620243,0,0,0,0,0,0.202910376962704,0,0,0,0,0,0,0.422215270595328,0,0,0,0,0,0,0.0941438007767792,0,0,0,0.229723400206959,0,0,0,0.238231775457789,0.411362273086194,0,0,0,0,0,0,0.185803175125719,0,0.0711418433484141,0.159426272728822,0.399158742865633,0,0.423347165447766,0,0.280797178113459,0,0,0,0,0.1605880751037,0.201799707191048,0,0,0,0,0.166849141711909,0,0,0,0,0.33307196799782,0,0.37428108081644,0.293016358543788,0.121360521749513,0,0,0,0,0,0,0.281338832821026,0.111308705022906,0,0,0.398495976502139,0,0,0.818149460017238,0,0,0,0,0,0.394573622547734,0,0,0,0.371072392647405,0,0.520855522170466,0.0874599999961957,0.724999575434793,0,0,0.236387681767936,0,0,0.694499979733169,0,0.120596438625408,0,0,0.886642856860642,0.219385397153973,0,0.139423744278603,0.0769502585037971,0.227884111694002,0,0,0.325942115766024,0.31900115973192,0,0.533034776018635,0,0,0.166211681900156,0,0,0.167821586975843,0.189753732724185,0,1.05499032264014,0.163232808159148,0.141353071433941,0,0,0.265372693510018,0,0,0.123563938946503,0.104421949505455,0.134802265961354,0.802577647298789,0.234264445725339,0.729819156862664,0.391329237864179,0,0.789168805698781,0,1.53036380815245,0.063186579628488,0,0,0,0,0,0,0,0.138674673013139,0.694238953340524,0.0979923974143777,0,0.52418000472609,0.687944129886466,0.19351266257817,0.0730893170861856,0.0821154570532092,0.193978032976839,0,0.451961481561065,0,0,0.0633107959558787,0,0,0,0,0.576361668616424,0,0.343189995723929,0,0.124252535565433,0,0,0,0,0,0.600420288709789,0.547621515567972,0,0.4297654414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| |||
|short_description=p5@SC5DL | |||
}} |
Revision as of 10:50, 11 January 2014
Short description: | p5@SC5DL |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | No |
Description: | CAGE_peak_5_at_SC5DL_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_AF187981, CU680288, HQ447381_5end |
EntrezGene: | SC5DL |
HGNC: | 10547 |
UniProt: | O75845 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
perirenal adipocyte cell | 1.02e-08 | 1 |
smooth muscle cell of the pulmonary artery | 2.84e-08 | 1 |
Ontology term | p-value | n |
---|---|---|
seminal vesicle | 2.29e-08 | 1 |
seminal fluid secreting gland | 2.29e-08 | 1 |
substantia nigra | 3.79e-08 | 1 |
midbrain nucleus | 3.79e-08 | 1 |
regional part of midbrain | 3.79e-08 | 1 |
midbrain | 3.79e-08 | 1 |
presumptive midbrain | 3.79e-08 | 1 |
midbrain neural tube | 3.79e-08 | 1 |
regional part of cerebral cortex | 8.96e-08 | 22 |
regional part of telencephalon | 2.21e-07 | 32 |
central nervous system | 5.52e-07 | 81 |
neural tube | 5.83e-07 | 56 |
neural rod | 5.83e-07 | 56 |
future spinal cord | 5.83e-07 | 56 |
neural keel | 5.83e-07 | 56 |
brain grey matter | 6.27e-07 | 34 |
gray matter | 6.27e-07 | 34 |
telencephalon | 6.27e-07 | 34 |
neural plate | 6.32e-07 | 82 |
presumptive neural plate | 6.32e-07 | 82 |
cerebral cortex | 7.54e-07 | 25 |
pallium | 7.54e-07 | 25 |
Ontology term | p-value | n |
---|---|---|
vascular disease | 1.71e-08 | 1 |
ischemia | 1.71e-08 | 1 |
extrinsic cardiomyopathy | 1.71e-08 | 1 |
myocardial ischemia | 1.71e-08 | 1 |
myocardial infarction | 1.71e-08 | 1 |