FFCP PHASE1:Hg19::chr12:6982778..6982862,+: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=10233 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=30363,19138 | |||
|TSSclassifier=strong | |||
|UniProt= | |||
|association_with_transcript=0bp_to_ENST00000274820,ENST00000421824,ENST00000449039_5end | |||
|coexpression_cluster_id=C45 | |||
|description=CAGE_peak_1_at_RPL13P5_5end,CAGE_peak_2_at_LRRC23_5end | |||
|id=chr12:6982778..6982862,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0005743!1.51e-18!86;UBERON:0001017!9.04e-18!82;UBERON:0000073!8.60e-17!94;UBERON:0001016!8.60e-17!94;UBERON:0000481!7.06e-15!347;UBERON:0001049!7.29e-15!57;UBERON:0005068!7.29e-15!57;UBERON:0006241!7.29e-15!57;UBERON:0007135!7.29e-15!57;UBERON:0000955!2.54e-14!69;UBERON:0006238!2.54e-14!69;UBERON:0002616!8.77e-14!59;UBERON:0003075!1.19e-13!86;UBERON:0007284!1.19e-13!86;UBERON:0002346!4.80e-12!90;UBERON:0000475!5.82e-11!365;UBERON:0002780!8.83e-11!41;UBERON:0001890!8.83e-11!41;UBERON:0006240!8.83e-11!41;UBERON:0000033!1.15e-10!123;UBERON:0002020!2.58e-10!34;UBERON:0003528!2.58e-10!34;UBERON:0000153!2.67e-10!129;UBERON:0007811!2.67e-10!129;UBERON:0000477!3.31e-10!286;UBERON:0001893!5.29e-10!34;UBERON:0000025!5.56e-10!194;UBERON:0003080!5.86e-10!42;UBERON:0001869!6.79e-10!32;UBERON:0002791!1.10e-09!33;UBERON:0003056!4.39e-09!61;UBERON:0004111!8.48e-09!241;UBERON:0000119!5.33e-08!312;UBERON:0000956!5.78e-08!25;UBERON:0000203!5.78e-08!25;UBERON:0004121!6.01e-08!169;UBERON:0005177!1.06e-07!107;UBERON:0002619!1.11e-07!22;UBERON:0000483!1.69e-07!309;UBERON:0005172!1.90e-07!55;UBERON:0005173!1.90e-07!55;UBERON:0000924!3.40e-07!173;UBERON:0006601!3.40e-07!173;UBERON:0007023!3.45e-07!115 | |||
|ontology_enrichment_uberon_v019=UBERON:0003528;8.33e-10;34!UBERON:0002020;8.33e-10;34!UBERON:0001893;9.06e-10;34!UBERON:0001869;1.07e-09;32!UBERON:0000073;1.18e-09;53!UBERON:0002616;1.18e-09;53!UBERON:0002791;2.22e-09;32!UBERON:0002780;8.57e-09;41!UBERON:0001890;8.57e-09;41!UBERON:0000956;1.01e-08;25!UBERON:0000203;1.01e-08;25!UBERON:0002619;2.85e-08;22!UBERON:0001017;4.71e-08;75!UBERON:0000955;2.27e-07;68!UBERON:0001950;3.66e-07;20!UBERON:0001016;9.46e-07;83 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001017,1.64e-21,81;UBERON:0001016,1.38e-19,89;UBERON:0001049,6.71e-18,56;UBERON:0005068,6.71e-18,56;UBERON:0006241,6.71e-18,56;UBERON:0007135,6.71e-18,56;UBERON:0000955,1.61e-17,68;UBERON:0006238,1.61e-17,68;UBERON:0000073,6.26e-17,53;UBERON:0002616,6.26e-17,53;UBERON:0003075,3.83e-15,82;UBERON:0007284,3.83e-15,82;UBERON:0011216,7.95e-15,223;UBERON:0002346,8.19e-14,86;UBERON:0002780,3.30e-12,41;UBERON:0001890,3.30e-12,41;UBERON:0003080,3.30e-12,41;UBERON:0006240,3.30e-12,41;UBERON:0003528,7.24e-12,34;UBERON:0002020,7.24e-12,34;UBERON:0001893,1.66e-11,34;UBERON:0001869,2.17e-11,32;UBERON:0002791,6.62e-11,32;UBERON:0003056,1.77e-10,61;UBERON:0000025,2.56e-10,192;UBERON:0010314,3.47e-10,132;UBERON:0004121,6.28e-10,171;UBERON:0000924,6.28e-10,171;UBERON:0006601,6.28e-10,171;UBERON:0000956,3.47e-09,25;UBERON:0000203,3.47e-09,25;UBERON:0002619,7.10e-09,22;UBERON:0005172,1.07e-08,54;UBERON:0005173,1.07e-08,54;UBERON:0010371,1.12e-08,104;UBERON:0000119,1.74e-08,309;UBERON:0004111,4.21e-08,240;UBERON:0000483,6.27e-08,306;UBERON:0001950,9.36e-08,20;UBERON:0007023,1.11e-07,114;UBERON:0003076,4.08e-07,15;UBERON:0003057,4.08e-07,15;UBERON:0005177,4.88e-07,101 | |||
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| |||
|short_description=p1@RPL13P5,p2@LRRC23 | |||
}} |
Revision as of 11:47, 11 January 2014
Short description: | p1@RPL13P5, p2@LRRC23 |
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Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_RPL13P5_5end, CAGE_peak_2_at_LRRC23_5end |
Coexpression cluster: | C45_testicular_choriocarcinoma_H9_teratocarcinoma_Wilms_pancreatic_iPS |
Association with transcript: | 0bp_to_ENST00000274820, ENST00000421824, ENST00000449039_5end |
EntrezGene: | LRRC23 |
HGNC: | 19138&submit=Submit 30363, 19138 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data