FFCP PHASE1:Hg19::chr12:13383342..13383346,+: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport= | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |||
|TSSclassifier=not | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|description=CAGE_peak_at_chr12:13383342..13383346,+ | |||
|id=chr12:13383342..13383346,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019=UBERON:0005425;1.65e-16;1 | |||
|ontology_enrichment_disease=DOID:1749!5.23e-21!14;DOID:0050687!1.42e-16!143;DOID:305!1.86e-16!106;DOID:14566!1.75e-12!239;DOID:162!1.74e-11!235 | |||
|ontology_enrichment_disease_v019=DOID:1749;1.87e-10;14!DOID:3307;3.71e-09;2!DOID:4074;6.42e-09;2!DOID:4905;6.42e-09;2!DOID:4929;6.42e-09;2!DOID:3498;6.42e-09;2 | |||
|ontology_enrichment_disease_v019_2=DOID:1749,2.10e-10,14;DOID:3307,3.71e-09,2;DOID:4074,4.70e-09,2;DOID:4905,4.70e-09,2;DOID:3498,4.70e-09,2;DOID:4929,5.49e-09,2;DOID:305,1.47e-08,106;DOID:0050687,7.67e-08,143 | |||
|ontology_enrichment_uberon=UBERON:0003343!1.09e-08!4;UBERON:0004785!1.09e-08!4;UBERON:0000344!1.11e-07!12;UBERON:0003729!5.97e-07!5;UBERON:0002075!8.06e-07!18 | |||
|ontology_enrichment_uberon_v019=UBERON:0000997;6.99e-17;1!UBERON:0005056;6.99e-17;1!UBERON:0004176;6.99e-17;1!UBERON:0000941;1.65e-16;1!UBERON:0004913;1.65e-16;1!UBERON:0001785;1.65e-16;1!UBERON:0002464;1.65e-16;1!UBERON:0004904;1.65e-16;1!UBERON:0003703;1.65e-16;1!UBERON:0001021;1.65e-16;1!UBERON:0001174;1.65e-16;1!UBERON:0004914;1.65e-16;1!UBERON:0002394;3.87e-16;4!UBERON:0003928;3.87e-16;4!UBERON:0002294;1.24e-09;7!UBERON:0001173;1.24e-09;7!UBERON:0003714;6.42e-09;2!UBERON:0005162;6.42e-09;2!UBERON:0000122;6.42e-09;2!UBERON:0000058;5.26e-07;10 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000997,6.47e-17,1;UBERON:0005056,6.47e-17,1;UBERON:0004913,1.21e-16,1;UBERON:0003703,1.21e-16,1;UBERON:0001174,1.21e-16,1;UBERON:0004914,1.21e-16,1;UBERON:0000941,1.65e-16,1;UBERON:0001785,1.65e-16,1;UBERON:0002464,1.65e-16,1;UBERON:0004904,1.65e-16,1;UBERON:0001021,1.65e-16,1;UBERON:0003902,1.65e-16,1;UBERON:0005425,1.65e-16,1;UBERON:0002394,3.75e-11,6;UBERON:0003928,3.75e-11,6;UBERON:0003714,6.42e-09,2;UBERON:0005162,6.42e-09,2;UBERON:0000122,6.42e-09,2;UBERON:0002294,9.85e-08,9;UBERON:0001173,9.85e-08,9;UBERON:0004912,9.85e-08,9 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.602694528023977,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.142169232487422,0,0,0,0,0,0,0,0.290796477559129,0,0,0.464858073811369,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0945348171640679,0.221729397462564,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.496971951695318,0,0,0.286836620748814,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.168336113954066,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.231860809950154,0,0,0,0,0,0,0,0.234004265139238,0,0,0,0,0.0895585227028483,0,0,0,0,0.207328115540772,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.142977993658148,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.144781306667579,0,0,0,0,0,0,0,0,0.773288812777695,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.160853921143607,0,0,0,0.164254312027618,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.255225424989168,0,0,0,0,0.308033580176089,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.329294892959902,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.106824071127473,5.77487913158015,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.146508179271894,0,0,0,0.47748896947538,0,0,0,0,0.445234820091624,0,1.05562704063997,0,0,0,0.613612095012929,0,0,1.43789361835723,0,0,0,0,0,0,0,0,0,0,0,0.1137934482855,0,0,0.344743373241465,0,0,0,0,0,0,0,0,0,0.557694977114413,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.326465616318295,0,0,0,0,0,0,0,0,0,0,0,0,0.19566461893209,1.94224303627274,0,0,0,0,0,0,0.664653872707185,0,0.627865836814451,0,0,0,0.173559738335131,2.74378712760257,0.609414446062818,0,0.51595809741485,0,0,0,0,0,0,0,0,0,0.195551382734803,0.400794101257669,0,0,0.144090417154106,0,0,0,0.49701014226173,0.707082103850386,0,0,0,0,0,0,0,0.429765441419957,0,0,0.229160424011684,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.77380195455795,0,0,0,0,1.05600336519407,0,0.191915197319445,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.27668251554036,2.1760712134779,1.0027595760908,0.306345576763462,0.327872630709804,0,0,0,0,0,0,0.0620964029413835,0,0,0.151649117541648,0.856396000634902,0.235265819698172,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.400027764663154,0.343395705182793,0.336749488765919,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.211312123358627,0,0,0.172214979660816,0,0,0,0,0,0,0,0,0,0,0.495743057036009,0,0,0,0,0,0.3062454773532,0,0,0,0,0,0,0,1.42769420259154,0.196295437002051,0.11796972334774,0.733714394086716,0.115525666150338,0.381382095467167,0.690359926060101,0,0,0,0,0,0.49131575253029,1.47856086217045,0,0.781078098613847,0,0,0,0,0,0,0,0,0,0,0,0,0,0.171488009437418,0,0,0.118193840883968,0.556157009460346,0,0,0.280272163313789,0,0,0,0,0,0,0,0,0,0,0,0,0.354996002191696,0.596493833314104,0,0.22910686854405,0,0,0,0.392600934460972,0,0,0,0,0,0,0,0,0,0,0,0.0771741581079447,0,0,0,0,0,0,0,0,0,0,0,0,0.705789743431384,0.401206833445841,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.112131862580613,0,0,0,0,0,0,0,0.162806537221949,1.60091018816573,3.8614456457388,0.359300808426348,0,0,0,0,0,0 | |||
|short_description=p@chr12:13383342..13383346,+ | |||
}} |
Revision as of 12:21, 11 January 2014
Short description: | p@chr12:13383342..13383346, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | No |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr12:13383342..13383346, + |
Coexpression cluster: | NA |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
mammalian vulva | 6.47e-17 | 1 |
external female genitalia | 6.47e-17 | 1 |
hepatopancreatic ampulla | 1.21e-16 | 1 |
extrahepatic bile duct | 1.21e-16 | 1 |
common bile duct | 1.21e-16 | 1 |
duodenal papilla | 1.21e-16 | 1 |
cranial nerve II | 1.65e-16 | 1 |
cranial nerve | 1.65e-16 | 1 |
nerve trunk | 1.65e-16 | 1 |
nerve connecting eye with brain | 1.65e-16 | 1 |
nerve | 1.65e-16 | 1 |
retinal neural layer | 1.65e-16 | 1 |
presumptive neural retina | 1.65e-16 | 1 |
bile duct | 3.75e-11 | 6 |
digestive system duct | 3.75e-11 | 6 |
neural tissue | 6.42e-09 | 2 |
multi cell component structure | 6.42e-09 | 2 |
neuron projection bundle | 6.42e-09 | 2 |
biliary system | 9.85e-08 | 9 |
biliary tree | 9.85e-08 | 9 |
biliary bud | 9.85e-08 | 9 |
Ontology term | p-value | n |
---|---|---|
squamous cell carcinoma | 2.10e-10 | 14 |
teratoma | 3.71e-09 | 2 |
pancreas adenocarcinoma | 4.70e-09 | 2 |
pancreatic carcinoma | 4.70e-09 | 2 |
pancreatic ductal adenocarcinoma | 4.70e-09 | 2 |
tubular adenocarcinoma | 5.49e-09 | 2 |
carcinoma | 1.47e-08 | 106 |
cell type cancer | 7.67e-08 | 143 |