FFCP PHASE1:Hg19::chr12:46662228..46662231,-: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=novel_noncoding | |||
|HGNC=NA | |||
|TSSclassifier=strong | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|description=CAGE_peak_at_chr12:46662228..46662231,- | |||
|id=chr12:46662228..46662231,- | |||
|ontology_enrichment_celltype=CL:0000791!4.94e-14!18;CL:0000789!4.94e-14!18;CL:0002420!4.94e-14!18;CL:0002419!4.94e-14!18;CL:0000790!4.94e-14!18;CL:0000084!6.47e-12!25;CL:0000827!6.47e-12!25;CL:0000624!9.37e-09!6;CL:0000625!2.48e-08!11;CL:0000838!4.44e-08!52;CL:0000542!8.15e-08!53;CL:0000051!8.15e-08!53 | |||
|ontology_enrichment_celltype_v019=CL:0000625;2.56e-11;11!CL:0000791;3.98e-07;18!CL:0000789;3.98e-07;18!CL:0002419;3.98e-07;18 | |||
|ontology_enrichment_celltype_v019_2=CL:0000625,2.61e-11,11;CL:0000791,4.02e-07,18;CL:0000789,4.02e-07,18;CL:0002420,4.02e-07,18;CL:0002419,4.02e-07,18;CL:0000790,4.02e-07,18 | |||
|ontology_enrichment_development_v019=CL:0000790;3.98e-07;18 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:3371;6.21e-15;1!DOID:4549;6.21e-15;1!DOID:5861;6.21e-15;1!DOID:6496;6.21e-15;1!DOID:4929;5.01e-08;2 | |||
|ontology_enrichment_disease_v019_2=DOID:3371,5.42e-15,1;DOID:4549,5.42e-15,1;DOID:5861,5.42e-15,1;DOID:6496,5.42e-15,1;DOID:4929,5.37e-08,2 | |||
|ontology_enrichment_uberon=UBERON:0001045!5.65e-07!11;UBERON:0002075!6.79e-07!18 | |||
|ontology_enrichment_uberon_v019=UBERON:0001264;1.41e-33;10!UBERON:0002075;1.06e-18;18!UBERON:0000949;2.64e-09;43!UBERON:0000007;7.27e-08;2 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001264,1.41e-33,10;UBERON:0002075,1.06e-18,18;UBERON:0000949,1.83e-10,45;UBERON:0000007,5.74e-08,2;UBERON:0002323,2.74e-07,46;UBERON:0004458,7.78e-07,49 | |||
|phase1_expression=0,0,0.281908808191942,0,0,0,0,0,0,0,0.697801167972428,0.218441372130172,0,0.123766352960047,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0787107813136792,0,0.383829398097213,0.309632246632152,0,0,0,0,0,0,0.553995408531877,0,0.434021741431704,0,0.32389366601898,0,0,0,0,0,0,0,0,0,0.236482229888585,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.368277635987565,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.661044872784862,0,0,0,0,0,0,0,0.393419540227666,0.393010762749165,0.822405995998037,0.334372990781356,0.32592226663359,0,0,0.111410456885174,0.294605907474837,0,0.541607727530031,0.128091319725675,0,0.328875809207352,1.10540007114339,0,0.444859689486181,0,1.04535523804977,0.679856056185397,0.383220493601921,1.37450978193052,0.506039384039006,0.637130828648193,1.30216690771284,0,0.301150238155546,0.127986611154418,0,0,0.821127996921047,1.41124720257313,1.33720097891754,0.868946423296794,0,0,0,0,0,0,0,0,0,0,0.175669571386252,0,0,0,0,0,0,0,0,0.371457501329565,0,0,0,0.56530794192401,0,0,0,0,0,0,0,0.760272105718513,0.24406205754817,0,0,0,0,0,0,0,0,0,0,0.436094052142534,0,0.12663051166458,0.397227542439656,0.573673241497627,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.204154171254893,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0974370051611986,0,0,0,0,0,0,0.386521706326594,0,0.286804595389004,0,0,0,0,0,0,0,0,0,0,0,0.118306800039844,0,0,0,0,0,0,0.196221465125346,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0925884451585296,0,0,0,0,0.117408694235822,0.577465791044295,0.462985512576611,0.570762456703795,0,0.858486162094873,0,0,0,0.93733833986777,0,0,0.268675568108545,0.290633938513962,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.144781306667579,0.205476322550383,0.179060963239896,0,1.77327684181734,0,0.898401253958239,0,0,0,0,0,0,0,0,0,0,0,0,0.178428988797162,0,0,0,0,0,0,0,0,0,0,0.413536052245775,0,0.320182673410333,0,0,0.907170879989041,0.248107807818777,0.153461973288062,0.280660094433074,0.512556597022804,0,0.160853921143607,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.330569830721956,0,0,0,0,0,0,0,0,0,0,0.143124886741991,0,0.316379424718726,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.141405431953713,0,0,0,0.438450885253763,0,0,0,0,0,0.143411352204052,0,0,0,0,0,0,0,0.192444225451024,0,0,0,0,0,0,0,0,0,0,0.238231775457789,0,0.648473311192717,0,0,0,0.962479855263359,0,0,0,0,0,0,0,0.211673582723883,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.561421621224659,0.146508179271894,0,0.334330152832435,0,0,0.296964680832639,0,0,0,0,0,0,0,0.276283915531148,0,0,0,0,0,0,0,0,0,0,0,0,0,0.260427761085233,0,0,0.227586896570999,0,0,0,0,0,0,0.120596438625408,0,0,0,0,0,0.697118721393016,0,0,0,0,0,0.31900115973192,0,0,0,0,0,0,0,0.167821586975843,0,0,0,0,0,0,0.995261931078505,0,0,0,0,0,0,0,0,0,0,0.971121518136371,0,0,0,0.063186579628488,0,0,3.32326936353593,2.64793564700399,2.82539626566503,4.77889719091835,0,0,0.173559738335131,0.195984794828755,0,0,0,0,0,0,0,3.97152570111751,0,0,0,0,0,0,0,0,0,0,0,0.432164393964449,0.372757606696298,0,0,0,0.101998217636322,0,0,0,0,0,0.262887354279314,0,0,0,0,0,0,0.0671834724867263,0,0,0,0,0.0674035438541849,0,0,0,0,0,0.137539436597234,0,0.449947783103001,0,0,0,0,0,0,0.717149357331379,0.383830394638891,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0620964029413835,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.761610424337591,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.168942440653073,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.622077260032973,0,0,0,0.109209638192014,0,0,0,0,0,0,0.80057074828547,0,0,0,0,0,0,0,0,0,0,0,0,0,0.115525666150338,0,0,0,0,0,0,0,0,0,0.0675375846183947,0,0,0,0,0,0,0,0,0,0,1.82089681270989,0,0,0.115233987555779,0,0,0,0,0.444925607568277,0.078493092850514,0,0,0,0,0,0.142953088353313,0.158013611732727,0,0,0,0.414432328326074,0,0,0,0,0,0.423387050190929,0.4582137370881,0,0,0.111855431797792,0.785201868921944,0.121917924982269,0,0,0,0,0,0.198950775161368,0,3.04954421505192,0,0,0,0,0,0,0,0,0,0,0,0.0939839179798536,0.128915775947154,0.199882311849858,0,0,0,0,0,0,0.157771562193185,0,0,0,0,0,0,0,0,0,0.101988829741982,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0673520530145875,0,0,0.488419611665847,0.106727345877715,0,2.15580485055809,0,0,0,0,0,0.320568492303233 | |||
|short_description=p@chr12:46662228..46662231,- | |||
}} |
Revision as of 13:06, 11 January 2014
Short description: | p@chr12:46662228..46662231, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr12:46662228..46662231, - |
Coexpression cluster: | NA |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
CD8-positive, alpha-beta T cell | 2.61e-11 | 11 |
mature alpha-beta T cell | 4.02e-07 | 18 |
alpha-beta T cell | 4.02e-07 | 18 |
immature T cell | 4.02e-07 | 18 |
mature T cell | 4.02e-07 | 18 |
immature alpha-beta T cell | 4.02e-07 | 18 |
Ontology term | p-value | n |
---|---|---|
pancreas | 1.41e-33 | 10 |
viscus | 1.06e-18 | 18 |
endocrine system | 1.83e-10 | 45 |
pituitary gland | 5.74e-08 | 2 |
body cavity | 2.74e-07 | 46 |
body cavity or lining | 7.78e-07 | 49 |
Ontology term | p-value | n |
---|---|---|
chondrosarcoma | 5.42e-15 | 1 |
extraosseous chondrosarcoma | 5.42e-15 | 1 |
myxoid chondrosarcoma | 5.42e-15 | 1 |
extraskeletal myxoid chondrosarcoma | 5.42e-15 | 1 |
tubular adenocarcinoma | 5.37e-08 | 2 |