FFCP PHASE1:Hg19::chr12:57628783..57628814,+: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |||
|TSSclassifier=weak | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|coexpression_cluster_id=C243 | |||
|description=CAGE_peak_at_chr12:57628783..57628814,+ | |||
|id=chr12:57628783..57628814,+ | |||
|ontology_enrichment_celltype=CL:0000153!2.10e-10!9;CL:0000447!2.10e-10!9;CL:0000327!4.06e-07!14;CL:0000667!6.17e-07!6;CL:0000058!6.17e-07!6;CL:0000138!6.17e-07!6 | |||
|ontology_enrichment_celltype_v019=CL:0000153;1.40e-28;9!CL:0000447;1.40e-28;9!CL:0000138;1.14e-19;6!CL:0000327;5.92e-17;15!CL:0002195;4.79e-15;2!CL:0002571;4.79e-15;2!CL:0000214;1.25e-10;3!CL:0000499;7.96e-09;28!CL:0000511;4.72e-08;1!CL:0002625;4.72e-08;1!CL:0000216;4.72e-08;1!CL:0000151;1.53e-07;36 | |||
|ontology_enrichment_celltype_v019_2=CL:0000153,1.47e-28,9;CL:0000447,1.47e-28,9;CL:0000058,1.16e-19,6;CL:0000138,1.16e-19,6;CL:0000327,6.09e-17,15;CL:0002195,5.15e-15,2;CL:0002571,5.15e-15,2;CL:0000214,1.28e-10,3;CL:0000151,5.86e-09,36;CL:0000499,8.08e-09,28;CL:0000511,3.57e-08,1;CL:0002625,3.57e-08,1;CL:0000216,3.57e-08,1 | |||
|ontology_enrichment_development_v019=UBERON:0000358;2.25e-08;1!UBERON:0010227;2.25e-08;1 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:3369;2.25e-08;1!DOID:5662;2.25e-08;1 | |||
|ontology_enrichment_disease_v019_2=DOID:3369,2.02e-08,1;DOID:5662,2.50e-08,1 | |||
|ontology_enrichment_uberon= | |||
|ontology_enrichment_uberon_v019=UBERON:0006915;1.25e-10;3!UBERON:0007616;1.25e-10;3!UBERON:0002217;1.25e-10;3!UBERON:0002018;1.25e-10;3!UBERON:0005795;2.25e-08;1!UBERON:0002079;2.25e-08;1!UBERON:0001136;4.72e-08;1!UBERON:0001343;4.72e-08;1!UBERON:0004910;4.72e-08;1!UBERON:0004813;4.72e-08;1!UBERON:0000478;6.81e-07;24 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0006915,1.28e-10,3;UBERON:0007616,1.28e-10,3;UBERON:0002217,1.28e-10,3;UBERON:0002018,1.28e-10,3;UBERON:0002079,2.69e-08,1;UBERON:0001136,3.57e-08,1;UBERON:0001343,3.57e-08,1;UBERON:0004910,3.57e-08,1;UBERON:0005154,3.57e-08,1;UBERON:0005295,3.57e-08,1;UBERON:0004813,3.57e-08,1;UBERON:0005297,3.57e-08,1;UBERON:0005294,3.57e-08,1;UBERON:0010141,3.57e-08,1;UBERON:0005891,3.57e-08,1;UBERON:0000478,6.26e-07,24 | |||
|phase1_expression=0,0.428201047781966,0.704772020479856,0,0,0,0,0.631719873426831,0.261185628199839,0,0,0,0,0,0,0,0,0,0,0,0,0.313454721478088,0,0,0,0,0,0,0,0,0,0,0,0,0.0774672005803016,0.142169232487422,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.199463657621632,0.426224750532694,0,0.56738522469114,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.954053754535364,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.60305222636709,4.69870898099936,4.01070328508712,5.5041677205113,0.795285947051099,21.8985691636186,0,0,0,0.0654895377488563,0,1.48313777113772,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.48485975847659,0,0.132409180813219,0,0.354668382198357,0.560677600142307,0,0.24666754841716,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.103325781175765,0,0,0,0,0,0,0,0.438977620880838,0,0.150238058906597,0,0,0.85422955527427,0,0,0,0.257640540045629,0.37223371266318,0,0.0974370051611986,0,0.368199594569197,0,0,0.10075209822764,0,0,0,0,0,0,0.580969714347592,0.414644220061482,0.252320850875628,0,0,0,0,0,0,0.236613600079688,0,0,0,0,0,0,0,0,0,1.40241773803446,0,0,0,0,0,0,0,0.171567810298526,0.658501712451753,0,0.301586917234893,0.0925884451585296,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.063497894292169,0,0,0,0,0,0,0,0,0.07333828582095,0,0,0,0,0,0,0,0,2.00169191121407,0,0,0,2.84313558994037,0,0,0,0,0,0,0,1.91699884393266,1.14861935834114,0,0,0,0,0.112085143993527,0,0,0,0,0,0,0.167516265334349,0,0,0,0,0.12269149171914,0,0.271265023699736,0.207970861530807,0.178428988797162,0.157702415033935,0.234282829985426,0.601892199455438,0,0,0,0,0,0.195801157462741,1.02943027143257,0,0,0,0,0,0,0.248107807818777,0,0.280660094433074,0.256278298511402,0,0.321707842287215,0,0,0,0,0,0.116210378459959,0,0,0,0,0,0,0,0,0,0,0.105551628892876,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.165018999841176,0,0,1.6068392984416,0.290012154876366,0,0,0,0,0,0,0,0.165284915360978,0.192190067365106,0,0.10115778085555,0,0,0,0.308033580176089,0.532306030317022,0,0,0,0,0,0,0,0,1.27281299170375,0,0,0,0,0.606547444719948,0,0,0,0.974853958525138,0,0.272999822815972,0,0,0,0,0,0,0.655894752046633,0.202910376962704,0.30982349809975,0.281695602532241,0.143411352204052,0.491245205065606,0.35667105148125,0,5.2776908824416,3.29294892959902,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.748562161632879,0,0,0,0,1.67121139316383,0,0.307160702099232,0,0,0,0,0,0.996239941255349,0,0,0,0,0,0,0,0,0.0986434056369336,0,0,0.969332746095218,0,0,0.260427761085233,0,0,1.137934482855,0.254253650292766,0,0,0,0.173624994933292,0,0.241192877250816,0,0,0,0.438770794307945,0,0.139423744278603,0.230850775511391,0,0,0,0,1.27600463892768,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.802577647298789,0.234264445725339,0,0,0,0,0,0,0.379119477770928,0,0,0,0,0,0,0,0.277349346026277,0,0,0,0,0,0,0,0,0.678923115418936,0,2.25980740780532,0,0,0.0633107959558787,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.279282401272254,0.458320848023367,0,0.399358000997982,0,0,0.201550417460179,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.182248669974074,0,0,0,0,0,0,2.1440859791201,0,0,0,0,0,0,0,0,0,0,0,0,0.26446520348538,0,0,0.106787412567695,0,0.414239055347196,0,0,0,0,0,0,0,0,0.157054096250234,0,0,0,0,0.110929051536852,0.0620964029413835,0,0.124980407962107,0,0,0,0,0,0.149254802886874,0,0,0.189403005275089,0,0,0.228840068396924,0,0,0,0.159296767163702,0,0,0,0,0.521745061811734,0.150257608997218,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.28120759293973,0,0,0,0,0.132864840313363,0,0,0,0,0,0,0,0,0,0.279759015438889,0,0,0,0,0.109209638192014,0,0,0,0,0.318004350653419,0,0,0,0,0.128458450192919,0,0,0,0,0.0691572524642179,0.484426936895553,0,0,0,0,0,0,0,0,0.0752103283492573,0.20170506870352,0,0,0,0,0.135075169236789,0,0,0,0,0,0,0,0,0,0,0,0,0.620916591138472,0,2.22934412268644,0.0679697329768317,0.131545547125698,0,0,0,0.157115589916002,0,0,1.29556554731173,4.7775168788705,0.142953088353313,0,0,0,0,0,0,0,0,0.118332000730565,0,0,0,0,0,0,0,0,0.647428837187895,0.205325613712494,1.1598144313382,0,0,0,0,0,0,0.150962843566674,0,0.655678681511872,0,0.245148321753905,0,0,0,0,0.169927114687817,0.657887425858975,0.128915775947154,0,0,0,0,0.730336388246517,0,0.143339583151451,0.157771562193185,0.203974470572744,0,0,0,0,0,0,0,0,0,0,0,0,0.0757786982182394,0,0,0.103432995861895,0,0,0.129177819672012,0,0,0.190941474834495,0.808468755832877,0.217716747896961,0.684466602170562,0,0,0.99798106963804,0,0,0,0,2.34640942403454,0,2.84827324821017,0,0,0 | |||
|short_description=p@chr12:57628783..57628814,+ | |||
}} |
Revision as of 14:08, 11 January 2014
Short description: | p@chr12:57628783..57628814, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | No |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr12:57628783..57628814, + |
Coexpression cluster: | C243_Chondrocyte_trachea_Synoviocyte_mesodermal_renal_Fibroblast_Ewing |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
GAG secreting cell | 1.47e-28 | 9 |
carbohydrate secreting cell | 1.47e-28 | 9 |
chondroblast | 1.16e-19 | 6 |
chondrocyte | 1.16e-19 | 6 |
extracellular matrix secreting cell | 6.09e-17 | 15 |
hepatic stem cell | 5.15e-15 | 2 |
hepatic mesenchymal stem cell | 5.15e-15 | 2 |
synovial cell | 1.28e-10 | 3 |
secretory cell | 5.86e-09 | 36 |
stromal cell | 8.08e-09 | 28 |
androgen binding protein secreting cell | 3.57e-08 | 1 |
seminiferous tubule epithelial cell | 3.57e-08 | 1 |
Sertoli cell | 3.57e-08 | 1 |
Ontology term | p-value | n |
---|---|---|
stratified squamous epithelium | 1.28e-10 | 3 |
layer of synovial tissue | 1.28e-10 | 3 |
synovial joint | 1.28e-10 | 3 |
synovial membrane of synovial joint | 1.28e-10 | 3 |
left cardiac atrium | 2.69e-08 | 1 |
mesothelium | 3.57e-08 | 1 |
seminiferous tubule of testis | 3.57e-08 | 1 |
epithelium of male gonad | 3.57e-08 | 1 |
epithelial cord | 3.57e-08 | 1 |
sex cord | 3.57e-08 | 1 |
seminiferous tubule epithelium | 3.57e-08 | 1 |
testis sex cord | 3.57e-08 | 1 |
genital ridge | 3.57e-08 | 1 |
primitive sex cord of indifferent gonad | 3.57e-08 | 1 |
coelomic epithelium | 3.57e-08 | 1 |
extraembryonic structure | 6.26e-07 | 24 |
Ontology term | p-value | n |
---|---|---|
peripheral primitive neuroectodermal tumor | 2.02e-08 | 1 |
pleomorphic carcinoma | 2.50e-08 | 1 |