FFCP PHASE1:Hg19::chr13:74185299..74185308,+: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
Line 1: | Line 1: | ||
{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |||
|TSSclassifier=not | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|coexpression_cluster_id=C133 | |||
|description=CAGE_peak_at_chr13:74185299..74185308,+ | |||
|id=chr13:74185299..74185308,+ | |||
|ontology_enrichment_celltype=CL:0000167!3.33e-08!1;CL:0000164!3.33e-08!1;CL:0000502!3.33e-08!1;CL:0000172!3.33e-08!1;CL:0000173!3.33e-08!1;CL:0002351!3.33e-08!1;CL:0000083!5.08e-08!4;CL:0002336!5.82e-08!1;CL:0002261!5.82e-08!1;CL:0002170!5.82e-08!1;CL:1001319!6.68e-08!1;CL:1000600!6.68e-08!1;CL:0000066!5.45e-07!254 | |||
|ontology_enrichment_celltype_v019=CL:0000083;1.13e-13;4 | |||
|ontology_enrichment_celltype_v019_2=CL:0000083,1.00e-13,4 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease=DOID:4929!4.47e-15!2;DOID:1749!3.00e-12!14;DOID:305!1.50e-08!106;DOID:4430!3.33e-08!1;DOID:0050619!4.11e-08!1;DOID:1357!4.11e-08!1;DOID:1793!5.08e-08!4;DOID:0050687!8.85e-07!143 | |||
|ontology_enrichment_disease_v019=DOID:3493;4.32e-26;2!DOID:4929;7.14e-26;2!DOID:1793;1.13e-13;4!DOID:4362;3.26e-11;5!DOID:170;1.44e-09;6!DOID:299;5.27e-09;25 | |||
|ontology_enrichment_disease_v019_2=DOID:3493,4.32e-26,2;DOID:4929,5.56e-26,2;DOID:1793,1.00e-13,4;DOID:4362,3.60e-11,5;DOID:170,1.32e-09,6;DOID:299,5.06e-09,25 | |||
|ontology_enrichment_uberon=UBERON:0003127!2.36e-15!2;UBERON:0003126!8.25e-10!7;UBERON:0001005!8.25e-10!7;UBERON:0007029!1.31e-08!1;UBERON:0000989!1.88e-08!1;UBERON:0008811!1.88e-08!1;UBERON:0006258!1.88e-08!1;UBERON:0005876!1.88e-08!1;UBERON:0004874!1.88e-08!1;UBERON:0007196!2.38e-08!14;UBERON:0001558!2.38e-08!14;UBERON:0001764!4.11e-08!1;UBERON:0001825!4.11e-08!1;UBERON:0004913!4.41e-08!1;UBERON:0003703!4.41e-08!1;UBERON:0001174!4.41e-08!1;UBERON:0004914!4.41e-08!1;UBERON:0004645!6.68e-08!1;UBERON:0001256!6.68e-08!1;UBERON:0001259!6.68e-08!1 | |||
|ontology_enrichment_uberon_v019=UBERON:0000002;1.44e-09;6!UBERON:0001560;1.44e-09;6 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000002,1.57e-09,6;UBERON:0001560,1.57e-09,6 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.369754010166788,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.605399502633369,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.436094052142534,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.109750285408626,0,0,0.0925884451585296,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.330569830721956,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.670302275535787,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.245040215981032,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.47787785689595,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.25481369850743,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.19566461893209,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0870592065804026,0,0,0,0,0,0,0,0,0,0,0,0.195551382734803,0,0,0,0,0,0,0.14405479798815,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.157054096250234,0,0,0,0,0.110929051536852,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.235939446695481,0,0,0,0,0,0,0,0,0,0,0.147856086217045,0,0,0,0,0,0,0.496211178389294,0,0,0,0,0,0,0,0,0,0,0,0,0.333694205676207,0.078493092850514,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.63288114932624,0,0,0,0.971421986118279,0,0,0,0,0,0,0,0,0,0,0.235676547101626,0,0,0,0,0,0,0,0.357107877211315,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.645499848534087,0.665320713092027,0.0814032686109745,0,0,1.61685363791856,0,0,0,0,0,0 | |||
|short_description=p@chr13:74185299..74185308,+ | |||
}} |
Revision as of 18:02, 11 January 2014
Short description: | p@chr13:74185299..74185308, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | No |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr13:74185299..74185308, + |
Coexpression cluster: | C133_signet_gall_small_kidney_colon_ductal_adenocarcinoma |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
epithelial cell of pancreas | 1.00e-13 | 4 |
Ontology term | p-value | n |
---|---|---|
uterine cervix | 1.57e-09 | 6 |
neck of organ | 1.57e-09 | 6 |
Ontology term | p-value | n |
---|---|---|
signet ring cell adenocarcinoma | 4.32e-26 | 2 |
tubular adenocarcinoma | 5.56e-26 | 2 |
pancreatic cancer | 1.00e-13 | 4 |
cervical cancer | 3.60e-11 | 5 |
endocrine gland cancer | 1.32e-09 | 6 |
adenocarcinoma | 5.06e-09 | 25 |