FFCP PHASE1:Hg19::chr14:35837883..35837893,-: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |||
|TSSclassifier=not | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|coexpression_cluster_id=C728 | |||
|description=CAGE_peak_at_chr14:35837883..35837893,- | |||
|id=chr14:35837883..35837893,- | |||
|ontology_enrichment_celltype=CL:0002057!4.31e-56!42;CL:0000860!4.39e-52!45;CL:0000839!9.89e-43!70;CL:0000557!4.48e-42!71;CL:0000766!4.77e-39!76;CL:0002194!2.02e-35!63;CL:0000576!2.02e-35!63;CL:0000040!2.02e-35!63;CL:0000559!2.02e-35!63;CL:0002009!3.18e-34!65;CL:0000738!2.15e-25!140;CL:0000763!3.77e-25!112;CL:0000049!3.77e-25!112;CL:0002031!1.62e-24!124;CL:0002087!3.41e-23!119;CL:0000037!9.01e-20!172;CL:0000566!9.01e-20!172;CL:0000988!2.04e-18!182;CL:0002032!2.77e-17!165;CL:0000837!2.77e-17!165;CL:0002274!2.27e-12!5;CL:0000457!2.27e-12!5;CL:0002191!2.27e-12!5;CL:0000097!2.27e-12!5;CL:0000831!2.27e-12!5;CL:0002028!2.27e-12!5;CL:0000842!3.84e-09!3;CL:0000134!1.33e-08!358;CL:0002320!2.47e-08!365;CL:0000219!2.18e-07!390;CL:0000163!4.55e-07!9;CL:0000224!4.61e-07!4 | |||
|ontology_enrichment_celltype_v019=CL:0000860;7.89e-32;33!CL:0002057;7.89e-32;33!CL:0000473;5.50e-22;39!CL:0000234;5.50e-22;39!CL:0000097;1.75e-15;5!CL:0000766;1.74e-13;69!CL:0000576;5.27e-13;48!CL:0000163;5.00e-09;9!CL:0000763;1.57e-08;100!CL:0002087;2.07e-07;104 | |||
|ontology_enrichment_celltype_v019_2=CL:0000860,5.53e-27,42;CL:0002057,5.53e-27,42;CL:0000839,2.73e-26,66;CL:0000557,6.77e-26,67;CL:0000766,4.34e-24,72;CL:0000473,1.43e-23,48;CL:0000234,1.43e-23,48;CL:0002194,8.68e-19,59;CL:0000576,8.68e-19,59;CL:0000040,8.68e-19,59;CL:0000559,8.68e-19,59;CL:0002009,3.60e-18,61;CL:0000763,5.97e-16,108;CL:0000049,5.97e-16,108;CL:0000097,1.62e-15,5;CL:0002028,1.62e-15,5;CL:0002031,2.62e-14,120;CL:0000738,1.46e-12,136;CL:0002032,1.62e-10,161;CL:0000837,1.62e-10,161;CL:0000037,4.75e-10,168;CL:0000988,1.67e-09,177;CL:0002087,1.71e-09,115;CL:0000163,4.80e-09,9 | |||
|ontology_enrichment_development_v019=CL:0002057;2.15e-15;42 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002371!6.78e-37!80;UBERON:0002390!1.64e-36!102;UBERON:0003061!1.64e-36!102;UBERON:0001474!4.90e-34!86;UBERON:0002193!7.59e-33!112;UBERON:0002405!2.58e-29!115;UBERON:0004765!2.34e-28!101;UBERON:0001434!2.34e-28!101;UBERON:0002204!2.11e-15!167;UBERON:0003081!1.05e-14!216;UBERON:0002240!6.05e-09!3;UBERON:0002384!5.73e-08!375 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002371,8.22e-23,76;UBERON:0001474,4.00e-21,82;UBERON:0004765,3.21e-19,90;UBERON:0002405,1.37e-18,93;UBERON:0002390,1.27e-17,98;UBERON:0003061,1.27e-17,98;UBERON:0001434,2.92e-17,100;UBERON:0002193,5.97e-16,108;UBERON:0002204,4.09e-10,167;UBERON:0003081,3.40e-08,203 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.200544447470142,0.434021741431704,0,0,0,0,0,0,0.464858073811369,0.411167888021826,0,0.575384784644301,0.256160706529101,0.945928919554341,0.689491361473237,3.87290810150296,1.35426486594342,0,0,0.449446968890169,1.53041946185451,3.20929027076094,2.55734850319616,0,0,0,0.870627715885752,1.13477044938228,2.4912889959823,0,0,0.217188844705117,0,0.736555271975129,4.43047342417238,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,7.04915592838625,0.720599767084807,1.38866676769018,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.215714200818617,0.640365346820666,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.533034776018635,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.525774708558629,0,0,0,0,0,0,0,0,1.16495949527454,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.573409195690071,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.196308467114945,0.297046400327086,0,0,0,0.0644578879735772,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | |||
|short_description=p@chr14:35837883..35837893,- | |||
}} |
Revision as of 19:44, 11 January 2014
Short description: | p@chr14:35837883..35837893, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | No |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr14:35837883..35837893, - |
Coexpression cluster: | C728_Mast_CD14_Basophils_chorionic_immature_Monocytederived_acute |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
classical monocyte | 5.53e-27 | 42 |
CD14-positive, CD16-negative classical monocyte | 5.53e-27 | 42 |
myeloid lineage restricted progenitor cell | 2.73e-26 | 66 |
granulocyte monocyte progenitor cell | 6.77e-26 | 67 |
myeloid leukocyte | 4.34e-24 | 72 |
defensive cell | 1.43e-23 | 48 |
phagocyte | 1.43e-23 | 48 |
monopoietic cell | 8.68e-19 | 59 |
monocyte | 8.68e-19 | 59 |
monoblast | 8.68e-19 | 59 |
promonocyte | 8.68e-19 | 59 |
macrophage dendritic cell progenitor | 3.60e-18 | 61 |
myeloid cell | 5.97e-16 | 108 |
common myeloid progenitor | 5.97e-16 | 108 |
mast cell | 1.62e-15 | 5 |
basophil mast progenitor cell | 1.62e-15 | 5 |
hematopoietic lineage restricted progenitor cell | 2.62e-14 | 120 |
leukocyte | 1.46e-12 | 136 |
hematopoietic oligopotent progenitor cell | 1.62e-10 | 161 |
hematopoietic multipotent progenitor cell | 1.62e-10 | 161 |
hematopoietic stem cell | 4.75e-10 | 168 |
hematopoietic cell | 1.67e-09 | 177 |
nongranular leukocyte | 1.71e-09 | 115 |
endocrine cell | 4.80e-09 | 9 |
Ontology term | p-value | n |
---|---|---|
bone marrow | 8.22e-23 | 76 |
bone element | 4.00e-21 | 82 |
skeletal element | 3.21e-19 | 90 |
immune system | 1.37e-18 | 93 |
hematopoietic system | 1.27e-17 | 98 |
blood island | 1.27e-17 | 98 |
skeletal system | 2.92e-17 | 100 |
hemolymphoid system | 5.97e-16 | 108 |
musculoskeletal system | 4.09e-10 | 167 |
lateral plate mesoderm | 3.40e-08 | 203 |