FFCP PHASE1:Hg19::chr15:52587945..52588011,-: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=55930 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=7604 | |||
|TSSclassifier=strong | |||
|UniProt=Q9NQX4,E9PE01,F5H231 | |||
|association_with_transcript=0bp_to_ENST00000261839,ENST00000443683,ENST00000541028,ENST00000558479,ENST00000558902,NM_018728,uc010bff.2,uc010uga.1,uc010ugb.1,uc010ugc.1_5end | |||
|description=CAGE_peak_1_at_MYO5C_5end | |||
|id=chr15:52587945..52588011,- | |||
|ontology_enrichment_celltype=CL:0000066!1.45e-30!254;CL:0000223!2.45e-08!59 | |||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2=CL:0000066,3.90e-26,253 | |||
|ontology_enrichment_development_v019=UBERON:0008947;1.63e-13;29!UBERON:0006595;4.35e-10;86!UBERON:0001041;9.67e-10;30!UBERON:0002532;1.84e-07;206!UBERON:0010316;1.84e-07;206!UBERON:0009117;5.51e-07;10!UBERON:0005564;5.51e-07;10 | |||
|ontology_enrichment_disease=DOID:305!3.15e-31!106;DOID:0050687!6.39e-24!143;DOID:299!1.10e-09!25;DOID:162!1.15e-08!235;DOID:14566!1.02e-07!239 | |||
|ontology_enrichment_disease_v019=DOID:305;5.40e-10;106!DOID:299;1.16e-08;25 | |||
|ontology_enrichment_disease_v019_2=DOID:305,1.22e-30,106;DOID:0050687,4.93e-21,143;DOID:299,9.00e-09,25;DOID:162,2.59e-07,235 | |||
|ontology_enrichment_uberon=UBERON:0007023!3.65e-23!115;UBERON:0004921!1.73e-18!129;UBERON:0004185!1.73e-18!129;UBERON:0001007!4.87e-18!155;UBERON:0001555!4.87e-18!155;UBERON:0007026!4.87e-18!155;UBERON:0000477!2.96e-17!286;UBERON:0004119!1.11e-16!169;UBERON:0000925!1.11e-16!169;UBERON:0006595!1.11e-16!169;UBERON:0000481!2.04e-16!347;UBERON:0004111!2.90e-15!241;UBERON:0000077!7.70e-15!130;UBERON:0001041!3.68e-14!98;UBERON:0000466!4.31e-14!126;UBERON:0001048!1.36e-13!168;UBERON:0005177!2.23e-13!107;UBERON:0003075!5.52e-13!86;UBERON:0007284!5.52e-13!86;UBERON:0000464!1.33e-12!104;UBERON:0002346!1.54e-12!90;UBERON:0000064!1.82e-12!219;UBERON:0000062!5.00e-12!511;UBERON:0001049!8.49e-12!57;UBERON:0005068!8.49e-12!57;UBERON:0006241!8.49e-12!57;UBERON:0007135!8.49e-12!57;UBERON:0001004!1.84e-11!72;UBERON:0008947!2.10e-11!38;UBERON:0003258!2.10e-11!38;UBERON:0000063!3.29e-11!97;UBERON:0005743!1.03e-10!86;UBERON:0000025!1.95e-10!194;UBERON:0000468!2.02e-10!659;UBERON:0000065!2.08e-10!53;UBERON:0000922!3.33e-10!612;UBERON:0000153!4.50e-10!129;UBERON:0007811!4.50e-10!129;UBERON:0000033!7.26e-10!123;UBERON:0001017!9.39e-10!82;UBERON:0000483!1.38e-09!309;UBERON:0002616!2.87e-09!59;UBERON:0000119!3.35e-09!312;UBERON:0000955!7.71e-09!69;UBERON:0006238!7.71e-09!69;UBERON:0003056!7.78e-09!61;UBERON:0002050!1.28e-08!605;UBERON:0005423!1.28e-08!605;UBERON:0000475!1.66e-08!365;UBERON:0000467!1.68e-08!625;UBERON:0005911!1.94e-08!82;UBERON:0000480!2.41e-08!626;UBERON:0000923!2.42e-08!604;UBERON:0005291!2.42e-08!604;UBERON:0006598!2.42e-08!604;UBERON:0002532!2.42e-08!604;UBERON:0000073!3.01e-08!94;UBERON:0001016!3.01e-08!94;UBERON:0000072!6.43e-08!46;UBERON:0009569!6.47e-08!113;UBERON:0003080!1.55e-07!42;UBERON:0002048!1.88e-07!22;UBERON:0000117!1.88e-07!22;UBERON:0000171!1.88e-07!22;UBERON:0000170!1.88e-07!22;UBERON:0005597!1.88e-07!22;UBERON:0000118!1.88e-07!22;UBERON:0002553!2.17e-07!70;UBERON:0004121!2.68e-07!169;UBERON:0000924!3.38e-07!173;UBERON:0006601!3.38e-07!173;UBERON:0002780!4.58e-07!41;UBERON:0001890!4.58e-07!41;UBERON:0006240!4.58e-07!41;UBERON:0003135!4.78e-07!11;UBERON:0005153!5.23e-07!37;UBERON:0005181!9.47e-07!35 | |||
|ontology_enrichment_uberon_v019=UBERON:0000065;6.92e-09;44!UBERON:0007023;8.34e-08;114!UBERON:0003135;8.92e-08;11!UBERON:0000072;9.97e-08;37!UBERON:0002048;3.67e-07;22!UBERON:0000117;3.67e-07;22!UBERON:0000171;3.67e-07;22!UBERON:0000170;3.67e-07;22 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0007023,2.69e-25,114;UBERON:0011216,6.66e-20,223;UBERON:0004921,9.21e-18,118;UBERON:0001007,8.01e-16,145;UBERON:0001555,8.01e-16,145;UBERON:0007026,8.01e-16,145;UBERON:0004111,1.27e-14,240;UBERON:0004119,3.95e-14,160;UBERON:0000925,3.95e-14,160;UBERON:0006595,3.95e-14,160;UBERON:0005177,6.34e-14,101;UBERON:0001041,1.03e-12,87;UBERON:0008947,6.62e-12,38;UBERON:0003258,6.62e-12,38;UBERON:0001048,3.04e-11,160;UBERON:0003075,5.19e-11,82;UBERON:0007284,5.19e-11,82;UBERON:0000025,1.30e-10,192;UBERON:0001049,3.18e-10,56;UBERON:0005068,3.18e-10,56;UBERON:0006241,3.18e-10,56;UBERON:0007135,3.18e-10,56;UBERON:0002346,3.69e-10,86;UBERON:0000065,4.63e-10,54;UBERON:0001004,2.08e-09,74;UBERON:0009569,3.36e-09,112;UBERON:0000073,3.43e-09,53;UBERON:0002616,3.43e-09,53;UBERON:0005911,1.08e-08,82;UBERON:0010371,1.50e-08,104;UBERON:0000922,2.30e-08,592;UBERON:0001017,4.09e-08,81;UBERON:0003056,5.44e-08,61;UBERON:0000483,8.14e-08,306;UBERON:0003135,9.17e-08,11;UBERON:0000072,2.08e-07,47;UBERON:0000119,2.08e-07,309;UBERON:0002048,3.23e-07,22;UBERON:0000117,3.23e-07,22;UBERON:0000171,3.23e-07,22;UBERON:0000170,3.23e-07,22;UBERON:0005597,3.23e-07,22;UBERON:0000118,3.23e-07,22;UBERON:0000489,3.91e-07,31;UBERON:0002780,7.43e-07,41;UBERON:0001890,7.43e-07,41;UBERON:0003080,7.43e-07,41;UBERON:0006240,7.43e-07,41;UBERON:0000955,8.11e-07,68;UBERON:0006238,8.11e-07,68 | |||
|phase1_expression=0,0.214100523890983,0,0,0,0,0,0,0,1.96587149201207,3.48900583986214,0.218441372130172,0,0.247532705920093,0.331397375727916,0,0,0,0,0.738726348460727,0.408001382488506,0.940364164434263,3.14859585844162,2.6006140763848,6.40267461933494,0,0,0,0,0,0,0.919421224478927,1.8072355126695,1.10926203050036,0,0,10.5696158160545,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.21079900526674,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,10.5737062863221,2.24203425192614,3.68737718685108,0,0,0,0.167186495390678,0,0,0,0,0,0,0,0,0.130059347559878,0,0,0,0,0,0,0,0,0,0,0,0,0,0.150575119077773,0,0,0,0,0,0,0,0,0,0.511450247374121,0,0,0.144846518960824,0,0,12.3840610484929,4.43458794925128,6.93894806975696,7.59678637886733,1.09288586487763,1.48313777113772,0,0,0.26591592103773,0,0,0,1.19257444420023,0,3.47140501607594,0,1.25849830862972,2.47606237746061,1.8809546988313,12.1455876809585,15.6537155582153,12.3846626722928,3.22263453687318,3.04108842287405,14.6437234528902,1.47065232138347,1.62028389576352,9.19787201326022,6.28682243353275,5.51796254368279,1.53316637465883,0.949265659568129,2.38162267109529,0,0,0.872188104285069,0,0,0,0,0,0.560677600142307,0,0,0,0.269421344139376,0,0,0.576175924479999,0,0,0,0,0,0,0,0.204154171254893,0.122834317311768,0,0,0,0,0,0,0,0,0.438977620880838,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.15956511897978,3.81844568827169,0.860413786167011,4.26907971453584,5.4337205011809,4.53156377191122,3.52447587052259,2.52320850875628,2.18986415445498,0,0,0,0,0,7.92655560266954,6.40621822296786,10.1224632551062,7.61028411853518,6.31850387867978,5.45722423955522,7.68538456512937,8.63374446551523,4.23221872641029,0,1.40241773803446,0,0,3.80265104465493,4.91413608338813,3.54473944008842,0,8.97815601364729,1.88724591328378,0.109750285408626,1.1240175325762,0.100528972411631,0.740707561268237,0,0,5.77325368101093,3.70977295920246,0.821860859650752,3.3204282985047,1.85194205030644,3.61482889245737,26.8669495306154,16.3112370798026,0,0,0,0.93733833986777,1.34385702559088,0.425325291727159,0.626909658919938,1.16253575405585,0.383382679165211,0,0,0.207328115540772,0.288239906833923,0.6312121671319,0,0,0,0,0.205654985406647,0.300343057843917,0,0.112131084345361,0,0,0,0,0.845302752556,0,0,0,0,0.266422179016099,0,0,0,0.325736184293735,0,0,0,0,0.599837947092342,0,0,0,0,0,0,0,0,0,0,0,0,0,1.52456774533478,0,0,0,0,0,0,0,0,0.500170521059677,0.271265023699736,0,0,0,0.117141414992713,0,0,1.03473071292505,0,0,0,0,0,0,0.215714200818617,0.106727557803444,0,0,0,0,0,0,0,0,0,0,0.154209693802656,0,0,0,0,5.92211302998949,1.20303882181971,5.98526428083326,0,0,0,6.31679458070376,3.08061348417659,3.13739907670742,1.46139224653261,2.11103257785751,0,1.02056223165909,2.59099099322567,3.08454505380579,0.812839312631559,2.50844886927427,5.09752546090077,2.49322802678617,4.02974558499921,0,0,3.59030175162945,3.28014645699706,2.92840555197873,8.44936295511323,0,0,0,0,1.6068392984416,0.193341436584244,0,0,0.275673144969061,0.107420244868274,0.290033387828457,0.0852266274161009,0.534192213880424,2.97512847649761,6.53446229041361,3.1903178123646,6.77757131732185,0,0,0,0,0,0,0,0,0,0.632758849437452,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.30982349809975,0,0,0,0,0,0,0,0,0,3.46399605811843,2.68120910214315,3.26672954583968,7.34321646058877,0,0,0.443430153536676,0,0,0,0,0,0,0,0,0,1.06824071127473,0,1.71528151186722,0,5.4822300931049,0,0,0,0,0,0,0.280797178113459,0,0,12.5317238545034,0,0,0,0,0,0,0,0,0,0,0,0,16.9866703678888,0,21.5211621469453,13.4787524930142,0.242721043499027,0,0,0,0.296964680832639,0,1.9882952955326,3.65740482667333,0,0,3.3780065300479,6.5751836122853,5.8019622261541,6.2983186963569,6.85200172764437,0,0,14.4688045347196,21.6615621357487,0,4.43895325366201,0,0,1.93866549219044,3.15411533750294,0,84.3785945916156,18.3665999992011,15.2249910841307,10.013823449124,15.7637263181515,12.0557717701648,3.10269035917318,0.583209226766509,2.2571249341328,2.65722415744152,4.5826646677655,22.8872604475625,19.3513704879643,16.5506666613987,3.94893714877151,8.71507708151921,15.1971881263678,9.15708076195185,0,1.61394733071642,1.97466817701499,5.97560545571044,0.957003479195758,0.183195186803725,0,0,0,0,0,0,0,0,1.90723894776454,2.53197677433632,5.87638109372932,6.78494742882916,7.3572137512311,15.9241908972561,8.66884132132724,9.16545217400438,0,0,0,4.44847477672468,4.81546588379273,1.87411556580271,0,4.10895699757388,0,13.0212852940299,12.0990716048664,0.61214552326098,4.42306057399416,6.0129367765797,4.14752765588989,7.31119259977904,1.323967823502,5.96472544973728,4.77889719091835,7.9690672888342,0,8.85154665509168,3.62571870433197,1.65412492502765,10.3088734262798,5.84752510403496,2.32215195093804,4.31226970808495,3.03827191096874,7.08019820365462,0.794305140223502,3.61569185248852,0,0,4.30513412499975,25.6172311382592,2.32460578729448,15.155162626494,0.799238438328521,12.247685458099,0,4.80465994013501,8.21112348532453,2.48505071130865,26.3977318770811,0.271808412147228,0.418411385249333,0,0,1.200840577419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| |||
|short_description=p1@MYO5C | |||
}} |
Revision as of 23:37, 11 January 2014
Short description: | p1@MYO5C |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_MYO5C_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_ENST00000261839, ENST00000443683, ENST00000541028, ENST00000558479, ENST00000558902, NM_018728, uc010bff.2, uc010uga.1, uc010ugb.1, uc010ugc.1_5end |
EntrezGene: | MYO5C |
HGNC: | 7604 |
UniProt: | Q9NQX4E9PE01F5H231 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
epithelial cell | 3.90e-26 | 253 |
Ontology term | p-value | n |
---|---|---|
carcinoma | 1.22e-30 | 106 |
cell type cancer | 4.93e-21 | 143 |
adenocarcinoma | 9.00e-09 | 25 |
cancer | 2.59e-07 | 235 |