FFCP PHASE1:Hg19::chr16:89238212..89238224,+: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
Line 1: | Line 1: | ||
{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=1013 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=1754 | |||
|TSSclassifier=strong | |||
|UniProt=P55291 | |||
|association_with_transcript=37bp_to_ENST00000289746,ENST00000521087,ENST00000524089_5end | |||
|coexpression_cluster_id=C134 | |||
|description=CAGE_peak_2_at_CDH15_5end | |||
|id=chr16:89238212..89238224,+ | |||
|ontology_enrichment_celltype=CL:0000188!1.28e-39!9;CL:0000515!6.62e-19!4;CL:0000680!2.01e-14!57;CL:0000056!2.01e-14!57;CL:0000355!2.01e-14!57;CL:0000594!6.71e-14!3;CL:0000183!8.45e-12!59;CL:0002575!5.03e-10!2;CL:0000187!1.82e-09!54;CL:0000393!2.81e-08!60;CL:0000211!2.81e-08!60;CL:0000035!3.13e-07!20;CL:0002590!9.89e-07!3 | |||
|ontology_enrichment_celltype_v019=CL:0000188;5.03e-58;9!CL:0000680;2.53e-42;7!CL:0000056;1.10e-33;4!CL:0000515;7.73e-26;3!CL:0000594;5.13e-12;3!CL:0000228;1.25e-09;1!CL:0002372;1.25e-09;1!CL:0000187;2.88e-09;55!CL:0002321;3.75e-09;15!CL:0000393;3.16e-07;61!CL:0000211;3.16e-07;61 | |||
|ontology_enrichment_celltype_v019_2=CL:0000188,5.23e-58,9;CL:0000515,1.15e-33,4;CL:0000680,1.40e-18,58;CL:0000056,1.40e-18,58;CL:0000355,1.40e-18,58;CL:0000594,5.28e-12,3;CL:0000187,6.56e-11,55;CL:0000393,1.04e-09,61;CL:0000211,1.04e-09,61;CL:0000228,1.15e-09,1;CL:0002372,1.15e-09,1;CL:0000222,2.40e-09,121 | |||
|ontology_enrichment_development_v019=CL:0000515;1.10e-33;4!CL:0000355;1.18e-11;58 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001134!2.48e-22!61;UBERON:0002036!2.48e-22!61;UBERON:0003082!2.48e-22!61;UBERON:0002385!1.77e-21!63;UBERON:0001015!1.77e-21!63;UBERON:0000383!1.77e-21!63;UBERON:0004290!7.13e-19!70;UBERON:0000914!5.63e-17!83;UBERON:0002329!5.63e-17!83;UBERON:0003077!5.63e-17!83;UBERON:0003059!5.63e-17!83;UBERON:0007282!5.63e-17!83;UBERON:0009618!5.63e-17!83;UBERON:0007285!5.63e-17!83;UBERON:0000486!1.89e-15!82;UBERON:0005256!2.35e-12!143;UBERON:0002037!6.16e-12!6;UBERON:0006215!6.16e-12!6;UBERON:0000490!1.30e-10!138;UBERON:0000341!6.58e-10!2;UBERON:0001630!7.19e-10!2;UBERON:0005090!7.19e-10!2;UBERON:0002204!1.14e-09!167;UBERON:0002100!9.67e-09!216;UBERON:0003104!3.34e-08!238;UBERON:0009142!3.34e-08!238;UBERON:0002680!5.55e-08!9;UBERON:0001895!5.55e-08!9;UBERON:0010092!5.55e-08!9;UBERON:0000475!3.72e-07!365 | |||
|ontology_enrichment_uberon_v019=UBERON:0001134;1.46e-99;16!UBERON:0002036;1.46e-99;16!UBERON:0002385;3.94e-49;31!UBERON:0001015;3.94e-49;31!UBERON:0000383;3.94e-49;31!UBERON:0002204;2.45e-10;70!UBERON:0001389;2.08e-09;1!UBERON:0000026;2.08e-09;1!UBERON:0008784;2.08e-09;1!UBERON:0006058;2.08e-09;1!UBERON:0003663;2.08e-09;1!UBERON:0004256;2.08e-09;1!UBERON:0004708;2.08e-09;1!UBERON:0002101;2.08e-09;1!UBERON:0004709;2.08e-09;1!UBERON:0002529;2.08e-09;1!UBERON:0010538;2.08e-09;1!UBERON:0003661;2.08e-09;1!UBERON:0010890;2.08e-09;1!UBERON:0002471;2.08e-09;1!UBERON:0001383;2.08e-09;1!UBERON:0010758;2.08e-09;1!UBERON:0010707;2.08e-09;1!UBERON:0000978;2.08e-09;1!UBERON:0002103;2.08e-09;1!UBERON:0001665;2.08e-09;1!UBERON:0003823;2.08e-09;1!UBERON:0000154;2.08e-09;1!UBERON:0010709;2.08e-09;1 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001134,1.34e-27,62;UBERON:0002036,1.34e-27,62;UBERON:0003082,1.34e-27,62;UBERON:0002385,1.17e-26,64;UBERON:0001015,1.17e-26,64;UBERON:0000383,1.17e-26,64;UBERON:0002329,8.97e-24,71;UBERON:0003059,8.97e-24,71;UBERON:0007282,8.97e-24,71;UBERON:0004290,8.97e-24,71;UBERON:0009618,8.97e-24,71;UBERON:0003077,2.08e-23,72;UBERON:0007285,2.08e-23,72;UBERON:0007524,4.73e-23,73;UBERON:0007503,2.09e-21,78;UBERON:0000486,5.83e-20,83;UBERON:0005256,9.75e-17,122;UBERON:0000490,2.84e-13,148;UBERON:0003104,4.72e-12,160;UBERON:0009142,4.72e-12,160;UBERON:0002100,2.10e-10,199;UBERON:0005418,1.76e-09,1;UBERON:0001389,1.76e-09,1;UBERON:0000026,1.76e-09,1;UBERON:0008784,1.76e-09,1;UBERON:0006058,1.76e-09,1;UBERON:0003663,1.76e-09,1;UBERON:0004256,1.76e-09,1;UBERON:0004708,1.76e-09,1;UBERON:0002101,1.76e-09,1;UBERON:0004709,1.76e-09,1;UBERON:0002529,1.76e-09,1;UBERON:0010538,1.76e-09,1;UBERON:0003661,1.76e-09,1;UBERON:0010890,1.76e-09,1;UBERON:0002471,1.76e-09,1;UBERON:0001383,1.76e-09,1;UBERON:0004357,1.76e-09,1;UBERON:0004347,1.76e-09,1;UBERON:0005420,1.76e-09,1;UBERON:0005732,1.76e-09,1;UBERON:0010758,1.76e-09,1;UBERON:0010707,1.76e-09,1;UBERON:0000978,1.76e-09,1;UBERON:0002103,1.76e-09,1;UBERON:0001665,1.76e-09,1;UBERON:0003823,1.76e-09,1;UBERON:0000154,1.76e-09,1;UBERON:0010709,1.76e-09,1;UBERON:0005733,1.76e-09,1;UBERON:0005730,1.76e-09,1;UBERON:0002204,1.60e-08,167 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.816002764977012,0.313454721478088,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.130979075497713,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.125118519871964,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.80483547606892,0,1.47008711385542,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0895585227028483,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.85273810081437,3.32997005335432,2.67119219315498,8.2368043090352,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.195801157462741,22.6474659715165,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.182091168006717,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.183138929636687,0.660075999364704,0,0,0,22.5242773620644,1.07834031980251,1.99554777143968,4.68644346447404,0.107420244868274,1.45016693914229,4.85791776271775,19.2309196996953,0,0,0,0,0,0,0,0,0,0,0,0,0.372158369359667,1.2655176988749,0,0,0,0,0,0,0,0,0,0,0,0.48763373908959,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.05163472634166,0,0.591095237907095,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.802577647298789,0,0,0,0,0,0,0,0,0,0.103688191397247,0,0,0,0,0,0,0,0,0,0.17472666824203,0,0,0,0,0,0,0.451961481561065,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0524545881349981,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.889811221596536,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,14.0009717632104,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.198916222116275,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.95559062914385,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.94228651156368,8.5210129690685,97.4244122324087,0.971421986118279,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.213233981900981,3.33290204049236,0,0,0,0,0,0,2.39563310759697,0,0,1.66330178273007,0,0,0,0,0,0,0,0,0,0 | |||
|short_description=p2@CDH15 | |||
}} |
Revision as of 12:48, 20 January 2014
Short description: | p2@CDH15 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_CDH15_5end |
Coexpression cluster: | C134_skeletal_diaphragm_tongue_throat_Skeletal_skin_penis |
Association with transcript: | 37bp_to_ENST00000289746, ENST00000521087, ENST00000524089_5end |
EntrezGene: | CDH15 |
HGNC: | 1754 |
UniProt: | P55291 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
cell of skeletal muscle | 5.23e-58 | 9 |
skeletal muscle myoblast | 1.15e-33 | 4 |
muscle precursor cell | 1.40e-18 | 58 |
myoblast | 1.40e-18 | 58 |
multi-potent skeletal muscle stem cell | 1.40e-18 | 58 |
skeletal muscle satellite cell | 5.28e-12 | 3 |
muscle cell | 6.56e-11 | 55 |
electrically responsive cell | 1.04e-09 | 61 |
electrically active cell | 1.04e-09 | 61 |
multinucleate cell | 1.15e-09 | 1 |
myotube | 1.15e-09 | 1 |
mesodermal cell | 2.40e-09 | 121 |