FFCP PHASE1:Hg19::chr17:13575255..13575271,-: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |||
|TSSclassifier=not | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|description=CAGE_peak_at_chr17:13575255..13575271,- | |||
|id=chr17:13575255..13575271,- | |||
|ontology_enrichment_celltype=CL:0002582!8.65e-12!3;CL:0000159!1.48e-08!2 | |||
|ontology_enrichment_celltype_v019=CL:0002149;2.95e-20;6!CL:0002255;2.95e-20;6!CL:0000319;1.07e-14;1!CL:0000159;5.37e-08;2!CL:1000415;5.37e-08;2 | |||
|ontology_enrichment_celltype_v019_2=CL:0002149,2.42e-20,6;CL:0002255,2.42e-20,6;CL:0000319,1.07e-14,1;CL:1000415,5.02e-08,2;CL:0000159,5.37e-08,2 | |||
|ontology_enrichment_development_v019=UBERON:0005795;2.05e-12;10 | |||
|ontology_enrichment_disease=DOID:162!9.62e-14!235;DOID:14566!2.81e-13!239;DOID:0050687!4.57e-13!143;DOID:305!1.14e-09!106;DOID:3908!1.50e-07!5 | |||
|ontology_enrichment_disease_v019=DOID:3001;2.95e-20;6!DOID:3030;1.07e-14;1!DOID:3908;1.38e-11;5!DOID:299;1.06e-08;25!DOID:3910;4.23e-08;2!DOID:3905;7.98e-07;9 | |||
|ontology_enrichment_disease_v019_2=DOID:3001,2.42e-20,6;DOID:3030,1.07e-14,1;DOID:0050687,5.41e-12,143;DOID:3908,1.28e-11,5;DOID:162,4.21e-11,235;DOID:14566,7.75e-11,239;DOID:305,3.55e-09,106;DOID:299,9.93e-09,25;DOID:3910,4.38e-08,2;DOID:3905,7.64e-07,9 | |||
|ontology_enrichment_uberon=UBERON:0000488!1.31e-08!4 | |||
|ontology_enrichment_uberon_v019=UBERON:0004903;4.23e-08;2!UBERON:0002173;4.23e-08;2!UBERON:0002186;4.23e-08;2!UBERON:0000995;1.57e-07;17!UBERON:0003975;3.86e-07;18 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0004903,4.38e-08,2;UBERON:0002173,4.38e-08,2;UBERON:0002186,4.38e-08,2 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.136874425072884,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0945348171640679,0,0.087834785693126,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.140450806702248,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.309157587715317,0,0,0.168776332241266,0.194874010322397,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.514703430895577,0,0,0,0,0,0,0,0.115930404975077,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.177561725313127,0.328508624055237,0.519254429183621,0.116210378459959,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0852266274161009,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.00299045849731,4.2620422020962,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.449341755736634,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.341826167541004,0.46112780877612,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.247127877893006,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.90915712168644,0,0,0,0.171986032471617,0,0,0,0,0,0,0.959293472527256,0,0,0,3.68730573157055,0,0.19980960958213,0,0,0,0,0.372757606696298,0,0,0,0.917983958726896,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.254019996197353,0,0,0,0,0,0,0,0,0.335434687599266,0,0,0.105600336519406,1.97216073266129,0,0,0,0,0,0,0,0,0,5.96358076248976,0,0,0,0,0,0.855434189421647,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.941063278792687,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.155262956876259,0,0.265841714557995,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.226705925512272,0,0,0,0,0,3.18040462702586,0.192914038270915,0,0,3.10887307558079,0,0,0,0,0,0,3.68659363130579,0,0,0,0,0,0.368211900503681,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.589848616738702,0,0,0,0,0,0,2.21875575573872,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.342976018874837,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.5510319283216,3.82215575590973,0.111855431797792,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.99705779624645,0,0,0,0,0,0,0,0,0,0,0,0,0,0.126166424835079,1.42045243552804,9.50238757585777,0,0,0,0,0,0,0,0,0,0,0,0,0.112131862580613,0,0,0.217716747896961,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | |||
|short_description=p@chr17:13575255..13575271,- | |||
}} |
Revision as of 13:59, 20 January 2014
Short description: | p@chr17:13575255..13575271, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | No |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr17:13575255..13575271, - |
Coexpression cluster: | NA |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
epithelial cell of uterus | 2.42e-20 | 6 |
stromal cell of endometrium | 2.42e-20 | 6 |
mucus secreting cell | 1.07e-14 | 1 |
epithelial cell of gall bladder | 5.02e-08 | 2 |
seromucus secreting cell | 5.37e-08 | 2 |
Ontology term | p-value | n |
---|---|---|
bronchoalveolar duct junction | 4.38e-08 | 2 |
alveolar duct | 4.38e-08 | 2 |
bronchiole | 4.38e-08 | 2 |
Ontology term | p-value | n |
---|---|---|
female reproductive endometrioid cancer | 2.42e-20 | 6 |
mucinous adenocarcinoma | 1.07e-14 | 1 |
cell type cancer | 5.41e-12 | 143 |
non-small cell lung carcinoma | 1.28e-11 | 5 |
cancer | 4.21e-11 | 235 |
disease of cellular proliferation | 7.75e-11 | 239 |
carcinoma | 3.55e-09 | 106 |
adenocarcinoma | 9.93e-09 | 25 |
lung adenocarcinoma | 4.38e-08 | 2 |
lung carcinoma | 7.64e-07 | 9 |