FFCP PHASE1:Hg19::chr17:34900745..34900821,+: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=79893 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=19357 | |||
|TSSclassifier=strong | |||
|UniProt=Q9H3C7 | |||
|association_with_transcript=0bp_to_ENST00000304718,ENST00000485685,ENST00000486208,ENST00000495023,uc002hna.2,uc002hnb.2_5end | |||
|coexpression_cluster_id=C176 | |||
|description=CAGE_peak_1_at_GGNBP2_5end | |||
|id=chr17:34900745..34900821,+ | |||
|ontology_enrichment_celltype=CL:0000738!2.01e-32!140;CL:0000037!2.18e-31!172;CL:0000566!2.18e-31!172;CL:0002032!1.85e-28!165;CL:0000837!1.85e-28!165;CL:0000988!1.41e-26!182;CL:0002031!7.63e-25!124;CL:0000766!1.35e-24!76;CL:0000763!2.68e-24!112;CL:0000049!2.68e-24!112;CL:0002087!1.57e-21!119;CL:0002057!1.64e-21!42;CL:0000557!2.71e-21!71;CL:0000839!1.05e-20!70;CL:0000860!4.89e-20!45;CL:0002009!3.26e-18!65;CL:0002194!2.69e-17!63;CL:0000576!2.69e-17!63;CL:0000040!2.69e-17!63;CL:0000559!2.69e-17!63 | |||
|ontology_enrichment_celltype_v019=CL:0000860;1.42e-15;33!CL:0002057;1.42e-15;33!CL:0000576;5.71e-14;48!CL:0000766;1.34e-12;69!CL:0000473;8.19e-12;39!CL:0000234;8.19e-12;39!CL:0000738;2.88e-08;136!CL:0002087;4.79e-08;104!CL:0000763;1.73e-07;100 | |||
|ontology_enrichment_celltype_v019_2=CL:0000738,8.22e-34,136;CL:0000037,1.62e-32,168;CL:0002032,1.52e-29,161;CL:0000837,1.52e-29,161;CL:0000988,3.00e-28,177;CL:0000766,1.73e-26,72;CL:0002031,4.34e-26,120;CL:0000763,1.24e-25,108;CL:0000049,1.24e-25,108;CL:0000557,4.52e-23,67;CL:0002087,1.11e-22,115;CL:0000839,1.83e-22,66;CL:0000860,1.64e-21,42;CL:0002057,1.64e-21,42;CL:0002009,6.81e-20,61;CL:0000473,1.17e-19,48;CL:0000234,1.17e-19,48;CL:0002194,5.99e-19,59;CL:0000576,5.99e-19,59;CL:0000040,5.99e-19,59;CL:0000559,5.99e-19,59 | |||
|ontology_enrichment_development_v019=CL:0002057;6.10e-16;42!CL:0000049;1.47e-07;108 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002390!5.29e-20!102;UBERON:0003061!5.29e-20!102;UBERON:0002371!1.67e-17!80;UBERON:0001474!4.92e-17!86;UBERON:0002193!1.30e-16!112;UBERON:0004765!1.14e-15!101;UBERON:0001434!1.14e-15!101;UBERON:0002405!4.78e-12!115 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002390,3.09e-21,98;UBERON:0003061,3.09e-21,98;UBERON:0002371,7.36e-19,76;UBERON:0001474,2.79e-18,82;UBERON:0004765,7.92e-18,90;UBERON:0002193,1.36e-17,108;UBERON:0002405,3.92e-16,93;UBERON:0001434,7.78e-16,100 | |||
|phase1_expression=16.5327325136207,24.6215602474631,14.9411668341729,15.0109947529696,16.5375604938096,19.1914475302081,17.7309914717817,12.0026775951098,17.2382514611893,5.16041266653169,7.6758128476967,13.1064823278103,8.17677632508206,28.7137938867308,20.5466372951308,14.7911532219391,10.8485015044316,17.527442169297,11.7103871709722,10.5884109946038,8.97603041474713,9.09018692286455,24.9025308804019,25.7323919137022,21.5933340103061,27.0503456347747,26.1079874450827,26.0532686148278,85.7534123530611,72.5437562403732,62.2360815730625,9.19421224478927,7.228942050678,18.4877005083394,28.1980610112298,20.0458617807264,27.0112404188059,103.043145986929,113.70870171557,96.5698374685541,35.1547294556681,35.6283032620877,39.1514862803964,62.812039152772,68.0176698639857,32.0210960767917,75.7718660312532,84.7005849324961,52.3403766812725,51.7846306179871,48.414373534,31.2156543452932,58.2620200444885,63.257498991215,43.3364757101894,72.849785402988,68.4994436645193,45.3941438579071,64.8897851826313,61.61837319861,35.1635419189473,61.3523418347292,50.4643053782729,40.4913513006059,73.4229373730318,77.7317757826861,46.0888464256725,54.77220902597,60.4920185367434,35.6189705316391,66.5939452896706,73.6555271975129,50.6339819905415,58.3064590220959,46.5603416923445,35.0129937998988,48.0766541306999,34.991216032071,44.3602619283941,53.2973830796135,42.5681689206053,39.2727930593963,35.1992488922645,32.2221780644658,32.9118423929515,76.3847098394048,69.6689017442662,30.4618793175876,41.6458269854463,32.4378276542024,116.688658667437,157.379566751412,91.3633015219297,51.5468181458201,89.1208615140642,23.4411835449819,49.5708620686859,39.6940870376656,46.8771417718881,25.0779743086017,32.592226663359,24.1458380924714,29.2240092611867,27.8526142212934,38.5933738792037,17.7227115666897,21.3935052374362,17.1642368432405,15.2169436645058,16.772666269575,19.3445012450094,33.037551773796,37.8130736063254,24.3462153561639,16.7256838087963,32.4064720115039,41.0045928154056,16.1504899376836,26.8200873540673,21.3438827597145,20.8346705234054,14.2567806667256,60.982923226498,54.138336518319,31.2326816380865,27.2293839850619,14.7803039445788,66.328618520937,58.5694028765881,52.2816098016904,26.8187552945358,8.71911117614727,20.3301473331213,16.9876401620746,12.5334477658972,17.8161218321813,9.54343136461319,21.8985691636186,30.3456763096658,20.1773751690933,18.796644138329,30.9110618174602,4.37154345951051,10.7527488407485,26.2883388860294,23.3333847981018,21.5391896040562,38.6354811374654,88.6592111709198,78.0060752792086,11.9257444420023,12.0432843314857,8.33137203858226,11.3061588384802,9.64848703282784,16.7822005583441,15.465627523724,22.4822580477316,27.3940022268767,18.7443543148215,9.66790361061953,6.84244895146661,13.4234131651493,22.0597848207521,17.8231228533987,16.2525505477025,17.7378204374674,34.7969474693466,12.2653309972707,13.2897192339538,11.9081133554765,138.369438307866,201.645737357129,3.48875241714027,20.8728219712034,24.8195802862576,39.7227542439656,34.7072311106065,13.1227301413392,10.6528744027038,14.9448594021587,14.8000529050296,24.5856717965815,16.838834008711,25.5000568856996,16.4979596132975,22.47086105472,11.0131072961884,16.544484072007,13.1208518955223,15.2437654162837,27.0099346880659,29.7846217637362,26.1238500466182,31.2355882019987,27.6377213951478,28.8278929480386,22.572054288359,32.6392346647695,5.46096817162816,8.62341770179486,21.2103503582123,20.7696742987461,33.5247579735861,23.7047915275652,20.5346823185343,28.69546925116,22.0058435330441,57.5840730561247,22.6370832147681,25.2198962379879,45.9139377009136,28.9577607160013,37.3578783066162,18.9839193458222,54.3459789816877,30.2054715999716,35.340728394176,17.5815306406792,14.0632069432366,27.3357386237793,15.415071028829,12.7170444232866,28.4093454150046,41.7301564503977,33.5561376605134,13.6610550865147,13.5180363687915,15.3376004587764,17.3113961875669,16.9054970086671,13.1391849267299,18.7739438795779,25.0863965895225,4.14404764057442,30.6482832501106,17.3251075600701,22.005064807411,22.9275178506218,19.521893420562,20.2940909827605,19.827029412409,22.066167577332,18.6067205261027,18.8372606520332,16.1593805917484,4.42893272774789,4.20725321410337,3.2925920906512,5.88034845542168,45.6318125358591,29.4848165003288,40.7645035610169,34.8755848537574,37.3884853171065,17.8430522710467,33.1445861934049,7.86812272803337,24.4285402960263,24.8137033024859,11.7290989911717,8.31947828223663,27.4229549848019,22.1427073502397,17.9635302180807,11.2605829253638,17.5934494779112,21.1182108980404,3.95102198979638,7.72637545885385,32.5006448035364,14.742268703772,29.2803389708795,39.3682102744463,28.2209975374084,43.666729950655,31.4350414686998,25.5757865892287,11.1180976957911,80.7967710149347,35.1313251712772,63.8570595865578,58.3685811338694,60.0913983109569,21.4622882707531,14.1335717456563,16.4104426094066,10.2643467613623,15.7326063836085,23.1264154539816,31.4409075893636,12.3344192779897,12.2068819273318,20.3147051724032,18.3565836376044,17.8828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| |||
|short_description=p1@GGNBP2 | |||
}} |
Revision as of 14:49, 20 January 2014
Short description: | p1@GGNBP2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_GGNBP2_5end |
Coexpression cluster: | C176_Eosinophils_Neutrophils_Mast_CD14_CD4_Basophils_CD19 |
Association with transcript: | 0bp_to_ENST00000304718, ENST00000485685, ENST00000486208, ENST00000495023, uc002hna.2, uc002hnb.2_5end |
EntrezGene: | GGNBP2 |
HGNC: | 19357 |
UniProt: | Q9H3C7 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
leukocyte | 8.22e-34 | 136 |
hematopoietic stem cell | 1.62e-32 | 168 |
hematopoietic oligopotent progenitor cell | 1.52e-29 | 161 |
hematopoietic multipotent progenitor cell | 1.52e-29 | 161 |
hematopoietic cell | 3.00e-28 | 177 |
myeloid leukocyte | 1.73e-26 | 72 |
hematopoietic lineage restricted progenitor cell | 4.34e-26 | 120 |
myeloid cell | 1.24e-25 | 108 |
common myeloid progenitor | 1.24e-25 | 108 |
granulocyte monocyte progenitor cell | 4.52e-23 | 67 |
nongranular leukocyte | 1.11e-22 | 115 |
myeloid lineage restricted progenitor cell | 1.83e-22 | 66 |
classical monocyte | 1.64e-21 | 42 |
CD14-positive, CD16-negative classical monocyte | 1.64e-21 | 42 |
macrophage dendritic cell progenitor | 6.81e-20 | 61 |
defensive cell | 1.17e-19 | 48 |
phagocyte | 1.17e-19 | 48 |
monopoietic cell | 5.99e-19 | 59 |
monocyte | 5.99e-19 | 59 |
monoblast | 5.99e-19 | 59 |
promonocyte | 5.99e-19 | 59 |
Ontology term | p-value | n |
---|---|---|
hematopoietic system | 3.09e-21 | 98 |
blood island | 3.09e-21 | 98 |
bone marrow | 7.36e-19 | 76 |
bone element | 2.79e-18 | 82 |
skeletal element | 7.92e-18 | 90 |
hemolymphoid system | 1.36e-17 | 108 |
immune system | 3.92e-16 | 93 |
skeletal system | 7.78e-16 | 100 |